2010

Agrawal, G., J. Bourguignon, Rolland, N., Ephritikhine, G., Ferro, M., Jaquinod, M., Alexiou, KG, Chardot, T., Chakraborty, N., Jolivet, P., Doonan, J., Rakwal, R. (2010). "Plant organelle proteomics: collaborating for optimal function " Mass Spect Review. (accepted)

Barrozo, R.B., Jarriault, D., Simeone, X., Gaertner, C., Gadenne, C., and Anton, S. (2010). Mating-induced transient inhibition of responses to sex pheromone in a male moth is not mediated by octopamine or serotonin. J Exp Biol 213, 1100-1106.

Baud, S., and Lepiniec, L. (2010). Physiological and developmental regulation of seed oil production. Prog Lipid Res.

Beauclair, L., Yu, A., and Bouche, N. (2010). microRNA-directed cleavage and translational repression of the copper chaperone for superoxide dismutase mRNA in Arabidopsis. Plant J.

Blein, T., Hasson, A., and Laufs, P. (2010). Leaf development: what it needs to be complex. Curr Opin Plant Biol 13, 75-82.

Bouchez-Mahiout, I., Pecquet, C., Kerre, S., Snegaroff, J., Raison-Peyron, N., and Lauriere, M. (2010). High Molecular Weight Entities in Industrial Wheat Protein Hydrolysates Are Immunoreactive with IgE from Allergic Patients. J Agric Food Chem.

Chardon, F., Barthelemy, J., Daniel-Vedele, F., and Masclaux-Daubresse, C. (2010). Natural variation of nitrate uptake and nitrogen use efficiency in Arabidopsis thaliana cultivated with limiting and ample nitrogen supply. J Exp Bot.

Hernandez Mora, J.R., Rivals, E., Mireau, H., and Budar, F. (2010). Sequence analysis of two alleles reveals that intra-and intergenic recombination played a role in the evolution of the radish fertility restorer (Rfo). BMC Plant Biol 10, 35.

Masclaux-Daubresse, C., Daniel-Vedele, F., Dechorgnat, J., Chardon, F., Gaufichon, L., and Suzuki, A. (2010). Nitrogen uptake, assimilation and remobilization in plants: challenges for sustainable and productive agriculture. Ann Bot.

Massonnet, C., Vile, D., Fabre, J., Hannah, M.A., Caldana, C., Lisec, J., Beemster, G.T., Meyer, R.C., Messerli, G., Gronlund, J.T., Perkovic, J., Wigmore, E., May, S., Bevan, M.W., Meyer, C., Rubio-Diaz, S., Weigel, D., Micol, J.L., Buchanan-Wollaston, V., Fiorani, F., Walsh, S., Rinn, B., Gruissem, W., Hilson, P., Hennig, L., Willmitzer, L., and Granier, C. (2010). Probing the reproducibility of leaf growth and molecular phenotypes: a comparison of three Arabidopsis accessions cultivated in ten laboratories. Plant Physiol.

Petit, M., Guidat, C., Daniel, J., Denis, E., Montoriol, E., Bui, Q.T., Lim, K.Y., Kovarik, A., Leitch, A.R., Grandbastien, M.A., and Mhiri, C. (2010). Mobilization of retrotransposons in synthetic allotetraploid tobacco. New Phytol.

Platt A., Horton M., Huang Y.S., Li Y., Anastasio A.E., Wayan Mulyati N., Ågren J., Bossdorf O., Byers D., Donohue K., Dunning M., Holub E.B., Hudson A., Le Corre V., Loudet O., Roux F., Warthmann N., Weigel D., Rivero L., Scholl R., Nordborg M., Bergelson J., Borevitz J.O. (2010) The scale of population structure in Arabidopsis thaliana PLoS Genetics 6(2): e1000843

Pulido, A., and Laufs, P. (2010). Co-ordination of developmental processes by small RNAs during leaf development. J Exp Bot 61, 1277-1291.

Roudier F., Gissot L, Beaudoin F, Haslam R, Michaelson, L., Marion, J, Molino D, Lima A, Bach L., Morin H, Tellier F, Palauqui JC, Bellec Y, Da Costa M, Vignard J, Rochat C, Markham J., Moreau P, Napier J and Faure JD (2010). Very -long chain fatty acids are involved in polar auxin transport and cell patterning in Arabidopsis. Plant Cell, (in press)

Schaefer, D.G., Delacote, F., Charlot, F., Vrielynck, N., Guyon-Debast, A., Le Guin, S., Neuhaus, J.M., Doutriaux, M.P., and Nogue, F. (2010). RAD51 loss of function abolishes gene targeting and de-represses illegitimate integration in the moss Physcomitrella patens. DNA Repair (Amst).

The international Brachypodium initiative (2010) Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature, 463 :763-768.

Tylichová M., Kopecný D., Moréra S., Briozzo, P., Lenobel, R., Snégaroff, J. Šebela, M. (2010) Structural and functional characterization of plant aminoaldehyde dehydrogenases with a broad specificity for natural and synthetic aminoaldehydes. J. Mol. Biol. (accepted)

Vlad D., Rappaport F., Simon M., Loudet O. (2010) Gene transposition causing natural variation for growth in Arabidopsis thaliana. PLoS Genetics (In Press)

2009

Feria Bourrellier, A.B., Ferrario-Mery, S., Vidal, J., and Hodges, M. (2009). Metabolite regulation of the interaction between Arabidopsis thaliana PII and N-acetyl-l-glutamate kinase. Biochem Biophys Res Commun 387, 700-704.

Abasolo, W., Eder, M., Yamauchi, K., Obel, N., Reinecke, A., Neumetzler, L., Dunlop, J.W., Mouille, G., Pauly, M., Hofte, H., and Burgert, I. (2009). Pectin may hinder the unfolding of xyloglucan chains during cell deformation: implications of the mechanical performance of Arabidopsis hypocotyls with pectin alterations. Mol Plant 2, 990-999.

Ainouche, M., Fortune, P., Salmon, A., Parisod, C., Grandbastien, M.A., Fukunaga, K., Ricou, M., and Misset, M.T. (2009). Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae). Biological Invasions 11, 1159-1173.

Allais, F., Martinet, S., and Ducrot, P.H. (2009). Straightforward Total Synthesis of 2-O-Feruloyl-L-malate, 2-O-Sinapoyl-L-malate and 2-O-5-Hydroxyferuloyl-L-malate. Synthesis-Stuttgart, 3571-3578.

Assor, C., Placet, V., Chabbert, B., Habrant, A., Lapierre, C., Pollet, B., and Perre, P. (2009). Concomitant Changes in Viscoelastic Properties and Amorphous Polymers during the Hydrothermal Treatment of Hardwood and Softwood. Journal of Agricultural and Food Chemistry 57, 6830-6837.

Atta, R., Laurens, L., Boucheron-Dubuisson, E., Guivarc'h, A., Carnero, E., Giraudat-Pautot, V., Rech, P., and Chriqui, D. (2009). Pluripotency of Arabidopsis xylem pericycle underlies shoot regeneration from root and hypocotyl explants grown in vitro. Plant J 57, 626-644.

Balasubramanian, S., Schwartz, C., Singh, A., Warthmann, N., Kim, M.C., Maloof, J.N., Loudet, O., Trainer, G.T., Dabi, T., Borevitz, J.O., Chory, J., and Weigel, D. (2009). QTL mapping in new Arabidopsis thaliana advanced intercross-recombinant inbred lines. PLoS One 4, e4318.

Barriere, Y., Mechin, V., Riboulet, C., Guillaumie, S., Thomas, J., Bosio, M., Fabre, F., Goffner, D., Pichon, M., Lapierre, C., and Martinant, J.P. (2009). Genetic and genomic approaches for improving biofuel production from maize. Euphytica 170, 183-202.

Baud, S., Dichow, N.R., Kelemen, Z., d'Andrea, S., To, A., Berger, N., Canonge, M., Kronenberger, J., Viterbo, D., Dubreucq, B., Lepiniec, L., Chardot, T., and Miquel, M. (2009). Regulation of HSD1 in seeds of Arabidopsis thaliana. Plant Cell Physiol 50, 1463-1478.

Baud, S., and Lepiniec, L. (2009). Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis. Plant Physiol Biochem 47, 448-455.

Baud, S., Wuilleme, S., To, A., Rochat, C., and Lepiniec, L. (2009). Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis. Plant J 60, 933-947.

Ben Amor, B., Wirth, S., Merchan, F., Laporte, P., d'Aubenton-Carafa, Y., Hirsch, J., Maizel, A., Mallory, A., Lucas, A., Deragon, J.M., Vaucheret, H., Thermes, C., and Crespi, M. (2009). Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses. Genome Res 19, 57-69.

Beopoulos, A., Chardot, T., and Nicaud, J.M. (2009). Yarrowia lipolytica: A model and a tool to understand the mechanisms implicated in lipid accumulation. Biochimie 91, 692-696.

Betz, G.A., Knappe, C., Lapierre, C., Olbrich, M., Welzl, G., Langebartels, C., Heller, W., Sandermann, H., and Ernst, D. (2009). Ozone affects shikimate pathway transcripts and monomeric lignin composition in European beech (Fagus sylvatica L.). European Journal of Forest Research 128, 109-116.

Beveridge, C.A., Dun, E.A., and Rameau, C. (2009). Pea has its tendrils in branching discoveries spanning a century from auxin to strigolactones. Plant Physiol 151, 985-990.

Bikard, D., Patel, D., Le Mette, C., Giorgi, V., Camilleri, C., Bennett, M.J., and Loudet, O. (2009). Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana. Science 323, 623-626.

Blein, T. (2009). [A conserved mechanism at the base of leaf dissection]. Med Sci (Paris) 25, 891-893.

Blein, T., Hasson, A., and Laufs, P. (2009). Leaf development: what it needs to be complex. Curr Opin Plant Biol 13, 75-82.

Brewer, P.B., Dun, E.A., Ferguson, B.J., Rameau, C., and Beveridge, C.A. (2009). Strigolactone acts downstream of auxin to regulate bud outgrowth in pea and Arabidopsis. Plant Physiol 150, 482-493.

Broyart, C., Fontaine, J.X., Molinie, R., Cailleu, D., Terce-Laforgue, T., Dubois, F., Hirel, B., and Mesnard, F. (2010). Metabolic profiling of maize mutants deficient for two glutamine synthetase isoenzymes using 1H-NMR-based metabolomics. Phytochem Anal 21, 102-109.

Canas, R.A., Quillere, I., Christ, A., and Hirel, B. (2009). Nitrogen metabolism in the developing ear of maize (Zea mays): analysis of two lines contrasting in their mode of nitrogen management. New Phytol 184, 340-352.

Castaings, L., Camargo, A., Pocholle, D., Gaudon, V., Texier, Y., Boutet-Mercey, S., Taconnat, L., Renou, J.P., Daniel-Vedele, F., Fernandez, E., Meyer, C., and Krapp, A. (2009). The nodule inception-like protein 7 modulates nitrate sensing and metabolism in Arabidopsis. Plant J 57, 426-435.

Cosgrove, D.J., Fincher, G., and Hofte, H. (2009). Plants and the State of the Union. Editorial. Mol Plant 2, 839.

Crowell, E.F., Bischoff, V., Desprez, T., Rolland, A., Stierhof, Y.D., Schumacher, K., Gonneau, M., Hofte, H., and Vernhettes, S. (2009). Pausing of Golgi bodies on microtubules regulates secretion of cellulose synthase complexes in Arabidopsis. Plant Cell 21, 1141-1154.

Curtis, M.J., Belcram, K., Bollmann, S.R., Tominey, C.M., Hoffman, P.D., Mercier, R., and Hays, J.B. (2009). Reciprocal chromosome translocation associated with TDNA-insertion mutation in Arabidopsis: genetic and cytological analyses of consequences for gametophyte development and for construction of doubly mutant lines. Planta 229, 731-745.

d'Erfurth, I., Jolivet, S., Froger, N., Catrice, O., Novatchkova, M., and Mercier, R. (2009). Turning meiosis into mitosis. PLoS Biol 7, e1000124.

De Muyt, A., Pereira, L., Vezon, D., Chelysheva, L., Gendrot, G., Chambon, A., Laine-Choinard, S., Pelletier, G., Mercier, R., Nogue, F., and Grelon, M. (2009). A high throughput genetic screen identifies new early meiotic recombination functions in Arabidopsis thaliana. PLoS Genet 5, e1000654.

de Muyt, A.D., Mercier, R., Mezard, C., and Grelon, M. (2009). Meiotic recombination and crossovers in plants. Genome Dyn 5, 14-25.

Debouba, M., Suzuki, A., Boutet, S., Ghorbel, M., and Gouia, H. (2009). Amino acid changes in leaves and roots of tomato (Solanum lycopersicon) during salt stress. Acta Botanica Gallica sous presse.

Dignac, M.F., Pechot, N., Thevenot, M., Lapierre, C., Bahri, H., Bardoux, G., and Rumpel, C. (2009). Isolation of soil lignins by combination of ball-milling and cellulolysis: Evaluation of purity and isolation efficiency with pyrolysis/GC/MS. Journal of Analytical and Applied Pyrolysis 85, 426-430.

Duroc, Y., Hiard, S., Vrielynck, N., Ragu, S., and Budar, F. (2009). The Ogura sterility-inducing protein forms a large complex without interfering with the oxidative phosphorylation components in rapeseed mitochondria. Plant Mol Biol 70, 123-137.

Elmayan, T., Adenot, X., Gissot, L., Lauressergues, D., Gy, I., and Vaucheret, H. (2009). A neomorphic sgs3 allele stabilizing miRNA cleavage products reveals that SGS3 acts as a homodimer. FEBS J 276, 835-844.

Fontaine, J.X., Ravel, C., Pageau, K., Heumez, E., Dubois, F., Hirel, B., and Le Gouis, J. (2009). A quantitative genetic study for elucidating the contribution of glutamine synthetase, glutamate dehydrogenase and other nitrogen-related physiological traits to the agronomic performance of common wheat. Theor Appl Genet 119, 645-662.

Fornara, F., Panigrahi, K.C., Gissot, L., Sauerbrunn, N., Ruhl, M., Jarillo, J.A., and Coupland, G. (2009). Arabidopsis DOF transcription factors act redundantly to reduce CONSTANS expression and are essential for a photoperiodic flowering response. Dev Cell 17, 75-86.

Fowler, J.H., Narvaez-Vasquez, J., Aromdee, D.N., Pautot, V., Holzer, F.M., and Walling, L.L. (2009). Leucine aminopeptidase regulates defense and wound signaling in tomato downstream of jasmonic acid. Plant Cell 21, 1239-1251.

Froissard, M., D'Andrea, S., Boulard, C., and Chardot, T. (2009). Heterologous expression of AtClo1, a plant oil body protein, induces lipid accumulation in yeast. Fems Yeast Research 9, 428-438.

Gallois, J.L., Guyon-Debast, A., Lecureuil, A., Vezon, D., Carpentier, V., Bonhomme, S., and Guerche, P. (2009). The Arabidopsis proteasome RPT5 subunits are essential for gametophyte development and show accession-dependent redundancy. Plant Cell 21, 442-459.

Gaudin, V., Andrey, P., Devinoy, E., Kress, C., Kieu, K., Beaujean, N., Maurin, Y., and Debey, P. (2009). Modeling the 3D functional architecture of the nucleus in animal and plant kingdoms. C R Biol 332, 937-946.

Grienenberger, E., Besseau, S., Geoffroy, P., Debayle, D., Heintz, D., Lapierre, C., Pollet, B., Heitz, T., and Legrand, M. (2009). A BAHD acyltransferase is expressed in the tapetum of Arabidopsis anthers and is involved in the synthesis of hydroxycinnamoyl spermidines. Plant Journal 58, 246-259.

Guenin, S., Mauriat, M., Pelloux, J., Van Wuytswinkel, O., Bellini, C., and Gutierrez, L. (2009). Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditions-specific, validation of references. J Exp Bot 60, 487-493.

Gutierrez, L., Bussell, J.D., Pacurar, D.I., Schwambach, J., Pacurar, M., and Bellini, C. (2009). Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance. Plant Cell 21, 3119-3132.

Johannes, F., Porcher, E., Teixeira, F.K., Saliba-Colombani, V., Simon, M., Agier, N., Bulski, A., Albuisson, J., Heredia, F., Audigier, P., Bouchez, D., Dillmann, C., Guerche, P., Hospital, F., and Colot, V. (2009). Assessing the impact of transgenerational epigenetic variation on complex traits. PLoS Genet 5, e1000530.

Jolivet, P., Boulard, C., Bellamy, A., Larre, C., Barre, M., Rogniaux, H., d'Andrea, S., Chardot, T., and Nesi, N. (2009). Protein composition of oil bodies from mature Brassica napus seeds. Proteomics 9, 3268-3284.

Konan, K.E., Durand-Gasselin, T., Kouadio, Y.J., Flori, A., Rival, A., Duval, Y., and Pannetier, C. (2009). In vitro conservation of oil palm somatic embryos for 20 years on a hormone-free culture medium: characteristics of the embryogenic cultures, derived plantlets and adult palms. Plant Cell Rep 29, 1-13.

Labboun, S., Terce-Laforgue, T., Roscher, A., Bedu, M., Restivo, F.M., Velanis, C.N., Skopelitis, D.S., Moschou, P.N., Roubelakis-Angelakis, K.A., Suzuki, A., and Hirel, B. (2009). Resolving the role of plant glutamate dehydrogenase. I. In vivo real time nuclear magnetic resonance spectroscopy experiments. Plant Cell Physiol 50, 1761-1773.

Lachaud, C., Da Silva, D., Cotelle, V., Thuleau, P., Xiong, T.C., Jauneau, A., Briere, C., Graziana, A., Bellec, Y., Faure, J.D., Ranjeva, R., and Mazars, C. (2009). Nuclear calcium controls the apoptotic-like cell death induced by d-erythro-sphinganine in tobacco cells. Cell Calcium 47, 92-100.

Laufs, P., Peaucelle, A., and Hofte, H. (2009). Shaping the meristem by mechanical forces. F-1000, Biology reports 1, 45.

Lefebvre, V., Kiani, S.P., and Durand-Tardif, M. (2009). A Focus on Natural Variation for Abiotic Constraints Response in the Model Species Arabidopsis thaliana. Int J Mol Sci 10, 3547-3582.

Lienard, D., and Nogue, F. (2009). Physcomitrella patens: a non-vascular plant for recombinant protein production. Methods Mol Biol 483, 135-144.

Loulakakis, K., Morot-Gaudry, J., Velanis, C., Skopelitis, D., Moschou, P., Hire, l.B., and Roubelakis-Angelakis, K. (2009). Advancements in nitrogen metabolism in grapevine. In : Grapevine molecular physiology and biotechnology. In Grapevine molecular physiology and biotechnology, K. Roubelakis-Angelakis, ed (Netherlands: Springer.

Lu, C., Xin, Z., Ren, Z., Miquel, M., and Browse, J. (2009). An enzyme regulating triacylglycerol composition is encoded by the ROD1 gene of Arabidopsis. Proc Natl Acad Sci U S A 106, 18837-18842.

Mallory, A.C., Hinze, A., Tucker, M.R., Bouche, N., Gasciolli, V., Elmayan, T., Lauressergues, D., Jauvion, V., Vaucheret, H., and Laux, T. (2009). Redundant and specific roles of the ARGONAUTE proteins AGO1 and ZLL in development and small RNA-directed gene silencing. PLoS Genet 5, e1000646.

Mallory, A.C., and Vaucheret, H. (2009). ARGONAUTE 1 homeostasis invokes the coordinate action of the microRNA and siRNA pathways. EMBO Rep 10, 521-526.

Manetti, M.E., Rossi, M., Nakabashi, M., Grandbastien, M.A., and Van Sluys, M.A. (2009). The Tnt1 family member Retrosol copy number and structure disclose retrotransposon diversification in different Solanum species. Mol Genet Genomics 281, 261-271.

Manicacci, D., Camus-Kulandaivelu, L., Fourmann, M., Arar, C., Barrault, S., Rousselet, A., Feminias, N., Consoli, L., Frances, L., Mechin, V., Murigneux, A., Prioul, J.L., Charcosset, A., and Damerval, C. (2009). Epistatic Interactions between Opaque2 Transcriptional Activator and Its Target Gene CyPPDK1 Control Kernel Trait Variation in Maize. Plant Physiology 150, 506-520.

Martin, A., Troadec, C., Boualem, A., Rajab, M., Fernandez, R., Morin, H., Pitrat, M., Dogimont, C., and Bendahmane, A. (2009). A transposon-induced epigenetic change leads to sex determination in melon. Nature 461, 1135-1138.

Matakiadis, T., Alboresi, A., Jikumaru, Y., Tatematsu, K., Pichon, O., Renou, J.P., Kamiya, Y., Nambara, E., and Truong, H.N. (2009). The Arabidopsis abscisic acid catabolic gene CYP707A2 plays a key role in nitrate control of seed dormancy. Plant Physiol 149, 949-960.

Matre, P., Meyer, C., and Lillo, C. (2009). Diversity in subcellular targeting of the PP2A B'eta subfamily members. Planta 230, 935-945.

Matsuno, M., Compagnon, V., Schoch, G.A., Schmitt, M., Debayle, D., Bassard, J.E., Pollet, B., Hehn, A., Heintz, D., Ullmann, P., Lapierre, C., Bernier, F., Ehlting, J., and Werck-Reichhart, D. (2009). Evolution of a Novel Phenolic Pathway for Pollen Development. Science 325, 1688-1692.

Maumus, F., Allen, A.E., Mhiri, C., Hu, H., Jabbari, K., Vardi, A., Grandbastien, M.A., and Bowler, C. (2009). Potential impact of stress activated retrotransposons on genome evolution in a marine diatom. BMC Genomics 10, 624.

Melser, S., Batailler, B., Peypelut, M., Poujol, C., Bellec, Y., Wattelet-Boyer, V., Maneta-Peyret, L., Faure, J.D., and Moreau, P. (2009). Glucosylceramide Biosynthesis is Involved in Golgi Morphology and Protein Secretion in Plant Cells. Traffic 11, 479-490.

Minic, Z., Jamet, E., San-Clemente, H., Pelletier, S., Renou, J.P., Rihouey, C., Okinyo, D.P., Proux, C., Lerouge, P., and Jouanin, L. (2009). Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes. BMC Plant Biol 9, 6.

Monachello, D., Allot M, Oliva S, Krapp A, Daniel-Vedele F, Barbier-Brygoo H, Ephritikhine G. (2009). Two anion transporters AtClCa and AtClCe fulfil interconnecting but not redundant roles in nitrate assimilation pathways. New Phytol 183, 88 -94.

Morse, A.M., Whetten, R.W., Dubos, C., and Campbell, M.M. (2009). Post-translational modification of an R2R3-MYB transcription factor by a MAP Kinase during xylem development. New Phytol 183, 1001-1013.

Muyt, A.D., Mercier, R., Mezard, C., and Grelon, M. (2009). Meiotic recombination and crossovers in plants. Genome Dyn 5, 14-25.

Nelieu, S., Perreau, F., Bonnemoy, F., Ollitrault, M., Azam, D., Lagadic, L., Bohatier, J., and Einhorn, J. (2009). Sunlight nitrate-induced photodegradation of chlorotoluron: evidence of the process in aquatic mesocosms. Environ Sci Technol 43, 3148-3154.

Nesi, N., Lucas, M.O., Auger, B., Baron, C., Lecureuil, A., Guerche, P., Kronenberger, J., Lepiniec, L., Debeaujon, I., and Renard, M. (2009). The promoter of the Arabidopsis thaliana BAN gene is active in proanthocyanidin-accumulating cells of the Brassica napus seed coat. Plant Cell Rep 28, 601-617.

Nicolas, S.D., Leflon, M., Monod, H., Eber, F., Coriton, O., Huteau, V., Chevre, A.M., and Jenczewski, E. (2009). Genetic regulation of meiotic cross-overs between related genomes in Brassica napus haploids and hybrids. Plant Cell 21, 373-385.

Parisod, C., Alix, K., Just, J., Petit, M., Sarilar, V., Mhiri, C., Ainouche, M., Chalhoub, B., and Grandbastien, M.A. (2009). Impact of transposable elements on the organization and function of allopolyploid genomes. New Phytol 186, 37-45.

Parisod, C., Salmon, A., Zerjal, T., Tenaillon, M., Grandbastien, M.A., and Ainouche, M. (2009). Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina. New Phytol 184, 1003-1015.

Pelletier, G. (2009). [Cultivation and environmental impacts of GMO crops]. J Soc Biol 203, 329-332.

Petit, M., Guidat, C., Daniel, J., Denis, E., Montoriol, E., Bui, Q.T., Lim, K.Y., Kovarik, A., Leitch, A.R., Grandbastien, M.A., and Mhiri, C. (2009). Mobilization of retrotransposons in synthetic allotetraploid tobacco. New Phytol.

Potel, F., Valadier, M.H., Ferrario-Mery, S., Grandjean, O., Morin, H., Gaufichon, L., Boutet-Mercey, S., Lothier, J., Rothstein, S.J., Hirose, N., and Suzuki, A. (2009). Assimilation of excess ammonium into amino acids and nitrogen translocation in Arabidopsis thaliana--roles of glutamate synthases and carbamoylphosphate synthetase in leaves. FEBS J 276, 4061-4076.

Pouteau, S., and Albertini, C. (2009). The significance of bolting and floral transitions as indicators of reproductive phase change in Arabidopsis. J Exp Bot 60, 3367-3377.

Punginelli, C., Wilson, A., Routaboul, J.M., and Kirilovsky, D. (2009). Influence of zeaxanthin and echinenone binding on the activity of the orange carotenoid protein. Biochim Biophys Acta 1787, 280-288.

Quentin, M., Allasia, V., Pegard, A., Allais, F., Ducrot, P.H., Favery, B., Levis, C., Martinet, S., Masur, C., Ponchet, M., Roby, D., Schlaich, N.L., Jouanin, L., and Keller, H. (2009). Imbalanced lignin biosynthesis promotes the sexual reproduction of homothallic oomycete pathogens. PLoS Pathog 5, e1000264.

Riboulet, C., Guillaumie, S., Mechin, V., Bosio, M., Pichon, M., Goffner, D., Lapierre, C., Pollet, B., Lefevre, B., Martinant, J.P., and Barriere, Y. (2009). Kinetics of Phenylpropanoid Gene Expression in Maize Growing Internodes: Relationships with Cell Wall Deposition. Crop Science 49, 211-223.

Rousset, P., Lapierre, C., Pollet, B., Quirino, W., and Perre, P. (2009). Effect of severe thermal treatment on spruce and beech wood lignins. Annals of Forest Science 66.

Ruel, K., Berrio-Sierra, J., Derikvand, M.M., Pollet, B., Thevenin, J., Lapierre, C., Jouanin, L., and Joseleau, J.P. (2009). Impact of CCR1 silencing on the assembly of lignified secondary walls in Arabidopsis thaliana. New Phytol 184, 99-113.

Saidi, I., Ammar, S., Demont-Caulet, N., Thevenin, J., Lapierre, C., Bouzid, S., and Jouanin, L. (2009). Thigmomorphogenesis in Solanum lycopersicum: Morphological and biochemical responses in stem after mechnical stimulation. Plant Science 177, 1-6.

Samouelian F, Gaudin V, and Boccara M. (2009). Genetique moleculaire des plantes.

Sugliani, M., Rajjou, L., Clerkx, E.J., Koornneef, M., and Soppe, W.J. (2009). Natural modifiers of seed longevity in the Arabidopsis mutants abscisic acid insensitive3-5 (abi3-5) and leafy cotyledon1-3 (lec1-3). New Phytol 184, 898-908.

Tadonleke, R.D., Leberre, B., Perreau, F., and Humbert, J.F. (2009). Responses of lake bacterioplankton activities and composition to the herbicide diuron. Aquat Toxicol 94, 103-113.

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Blein, T., Pulido, A., Vialette-Guiraud, A., Nikovics, K., Morin, H., Hay, A., Johansen, I.E., Tsiantis, M., and Laufs, P. (2008). A conserved molecular framework for compound leaf development. Science 322, 1835-1839.

Boualem, A., Fergany, M., Fernandez, R., Troadec, C., Martin, A., Morin, H., Sari, M.A., Collin, F., Flowers, J.M., Pitrat, M., Purugganan, M.D., Dogimont, C., and Bendahmane, A. (2008). A conserved mutation in an ethylene biosynthesis enzyme leads to andromonoecy in melons. Science 321, 836-838.

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Deveaux, Y., Toffano-Nioche, C., Claisse, G., Thareau, V., Morin, H., Laufs, P., Moreau, H., Kreis, M., and Lecharny, A. (2008). Genes of the most conserved WOX clade in plants affect root and flower development in Arabidopsis. BMC Evol Biol 8, 291.

Diaz, C., Lemaitre, T., Christ, A., Azzopardi, M., Kato, Y., Sato, F., Morot-Gaudry, J.F., Le Dily, F., and Masclaux-Daubresse, C. (2008). Nitrogen recycling and remobilization are differentially controlled by leaf senescence and development stage in Arabidopsis under low nitrogen nutrition. Plant Physiol 147, 1437-1449.

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Dubos, C., Le Gourrierec, J., Baudry, A., Huep, G., Lanet, E., Debeaujon, I., Routaboul, J.M., Alboresi, A., Weisshaar, B., and Lepiniec, L. (2008). MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana. Plant J 55, 940-953.

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Es-Safi, N.E., Le Guerneve, C., and Ducrot, P.H. (2008). Application of NMR spectroscopy and mass spectrometry to the structural elucidation of modified flavan-3-ols and their coupling reaction products. Spectroscopy Letters 41, 41-56.

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Fardet, A., Llorach, R., Orsoni, A., Martin, C.F., Pujos-Guillot, E., Lapierre, C., and Scalbert, A. (2008). Metabolomics provide new insight on the metabolism of dietary phytochemicals in rats. Journal of Nutrition 138, 1282-1287.

Ferrario-Mery, S., Meyer, C., and Hodges, M. (2008). Chloroplast nitrite uptake is enhanced in Arabidopsis PII mutants. FEBS Lett 582, 1061-1066.

Ghanem, A., Bados, P., Perreau, F., Benabdallah, R., Plagellat, C., de Alencastro, L.F., and Einhorn, J. (2008). Multiresidue analysis of atrazine, diuron and their degradation products in sewage sludge by liquid chromatography tandem mass spectrometry. Anal Bioanal Chem 391, 345-352.

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Gomez-Roldan, V., Fermas, S., Brewer, P.B., Puech-Pages, V., Dun, E.A., Pillot, J.P., Letisse, F., Matusova, R., Danoun, S., Portais, J.C., Bouwmeester, H., Becard, G., Beveridge, C.A., Rameau, C., and Rochange, S.F. (2008). Strigolactone inhibition of shoot branching. Nature 455, 189-194.

Gonzalez-Melendi, P., Uyttewaal, M., Morcillo, C.N., Hernandez Mora, J.R., Fajardo, S., Budar, F., and Lucas, M.M. (2008). A light and electron microscopy analysis of the events leading to male sterility in Ogu-INRA CMS of rapeseed (Brassica napus). J Exp Bot 59, 827-838.

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Hematy, K., and Hofte, H. (2008). Novel receptor kinases involved in growth regulation. Curr Opin Plant Biol 11, 321-328.

Higgins, J.D., Vignard, J., Mercier, R., Pugh, A.G., Franklin, F.C., and Jones, G.H. (2008). AtMSH5 partners AtMSH4 in the class I meiotic crossover pathway in Arabidopsis thaliana, but is not required for synapsis. Plant J 55, 28-39.

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Lazrek, F., Roussel, V., Ronfort, J., Cardinet, G., Chardon, F., Aouani, M.E., and Huguet, T. (2008). The use of neutral and non-neutral SSRs to analyse the genetic structure of a Tunisian collection of Medicago truncatula lines and to reveal associations with eco-environmental variables. Genetica 135, 391-402.

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Lienard, D., Durambur, G., Kiefer-Meyer, M.C., Nogue, F., Menu-Bouaouiche, L., Charlot, F., Gomord, V., and Lassalles, J.P. (2008). Water transport by aquaporins in the extant plant Physcomitrella patens. Plant Physiol 146, 1207-1218.

Lohmiller, L.D., De Muyt, A., Howard, B., Offenberg, H.H., Heyting, C., Grelon, M., and Anderson, L.K. (2008). Cytological analysis of MRE11 protein during early meiotic prophase I in Arabidopsis and tomato. Chromosoma 117, 277-288.

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Pouch-Pelissier, M.N., Pelissier, T., Elmayan, T., Vaucheret, H., Boko, D., Jantsch, M.F., and Deragon, J.M. (2008). SINE RNA induces severe developmental defects in Arabidopsis thaliana and interacts with HYL1 (DRB1), a key member of the DCL1 complex. PLoS Genet 4, e1000096.

Pouilly, N., Delourme, R., Alix, K., and Jenczewski, E. (2008). Repetitive sequence-derived markers tag centromeres and telomeres and provide insights into chromosome evolution in Brassica napus. Chromosome Res 16, 683-700.

Pouteau, S., Carre, I., Gaudin, V., Ferret, V., Lefebvre, D., and Wilson, M. (2008). Diversification of photoperiodic response patterns in a collection of early-flowering mutants of Arabidopsis. Plant Physiol 148, 1465-1473.

Prioul, J.L., Mechin, V., Lessard, P., Thevenot, C., Grimmer, M., Chateau-Joubert, S., Coates, S., Hartings, H., Kloiber-Maitz, M., Murigneux, A., Sarda, X., Damerval, C., and Edwards, K.J. (2008). A joint transcriptomic, proteomic and metabolic analysis of maize endosperm development and starch filling. Plant Biotechnology Journal 6, 855-869.

Purkrtova, Z., Jolivet, P., Miquel, M., and Chardot, T. (2008). Structure and function of seed lipid-body-associated proteins. C R Biol 331, 746-754.

Purkrtova, Z., Le Bon, C., Kralova, B., Ropers, M.H., Anton, M., and Chardot, T. (2008). Caleosin of Arabidopsis thaliana: Effect of Calcium on Functional and Structural Properties. Journal of Agricultural and Food Chemistry 56, 11217-11224.

Ragni, L., Belles-Boix, E., Gunl, M., and Pautot, V. (2008). Interaction of KNAT6 and KNAT2 with BREVIPEDICELLUS and PENNYWISE in Arabidopsis inflorescences. Plant Cell 20, 888-900.

Rajjou, L., and Debeaujon, I. (2008). Seed longevity: survival and maintenance of high germination ability of dry seeds. C R Biol 331, 796-805.

Rajjou, L., Lovigny, Y., Groot, S.P., Belghazi, M., Job, C., and Job, D. (2008). Proteome-wide characterization of seed aging in Arabidopsis: a comparison between artificial and natural aging protocols. Plant Physiol 148, 620-641.

Ralet, M.C., Crepeau, M.J., Lefebvre, J., Mouille, G., Hofte, H., and Thibault, J.F. (2008). Reduced number of homogalacturonan domains in pectins of an Arabidopsis mutant enhances the flexibility of the polymer. Biomacromolecules 9, 1454-1460.

Ralph, J., Kim, H., Lu, F., Grabber, J.H., Leple, J.C., Berrio-Sierra, J., Derikvand, M.M., Jouanin, L., Boerjan, W., and Lapierre, C. (2008). Identification of the structure and origin of a thioacidolysis marker compound for ferulic acid incorporation into angiosperm lignins (and an indicator for cinnamoyl CoA reductase deficiency). Plant J 53, 368-379.

Raman, S., Greb, T., Peaucelle, A., Blein, T., Laufs, P., and Theres, K. (2008). Interplay of miR164, CUP-SHAPED COTYLEDON genes and LATERAL SUPPRESSOR controls axillary meristem formation in Arabidopsis thaliana. Plant J 55, 65-76.

Ravalason, H., Jan, G., Molle, D., Pasco, M., Coutinho, P.M., Lapierre, C., Pollet, B., Bertaud, F., Petit-Conil, M., Grisel, S., Sigoillot, J.C., Asther, M., and Herpoel-Gimbert, I. (2008). Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood. Applied Microbiology and Biotechnology 80, 719-733.

Richard-Molard, C., Krapp, A., Brun, F., Ney, B., Daniel-Vedele, F., and Chaillou, S. (2008). Plant response to nitrate starvation is determined by N storage capacity matched by nitrate uptake capacity in two Arabidopsis genotypes. J Exp Bot 59, 779-791.

Ronceret, A., Gadea-Vacas, J., Guilleminot, J., Lincker, F., Delorme, V., Lahmy, S., Pelletier, G., Chaboute, M.E., and Devic, M. (2008). The first zygotic division in Arabidopsis requires de novo transcription of thymidylate kinase. Plant J 53, 776-789.

Ruggeberg, M., Speck, T., Paris, O., Lapierre, C., Pollet, B., Koch, G., and Burgert, I. (2008). Stiffness gradients in vascular bundles of the palm Washingtonia robusta. Proceedings of the Royal Society B-Biological Sciences 275, 2221-2229.

Salmon, A., Clotault, J., Jenczewski, E., Chable, V., and Manzanares-Dauleux, M. (2008). Brassica oleracea displays a high level of DNA-methylation polymorphism. Plant Science 174, 61-70.

Santos-Mendoza, M., Dubreucq, B., Baud, S., Parcy, F., Caboche, M., and Lepiniec, L. (2008). Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis. Plant J 54, 608-620.

Shankar, M.V., Nelieu, S., Kerhoas, L., and Einhorn, J. (2008). Natural sunlight NO(3)(-)/NO(2)(-)-induced photo-degradation of phenylurea herbicides in water. Chemosphere 71, 1461-1468.

Sicard, O., Loudet, O., Keurentjes, J.J., Candresse, T., Le Gall, O., Revers, F., and Decroocq, V. (2008). Identification of quantitative trait loci controlling symptom development during viral infection in Arabidopsis thaliana. Mol Plant Microbe Interact 21, 198-207.

Simon, M., Loudet, O., Durand, S., Berard, A., Brunel, D., Sennesal, F.X., Durand-Tardif, M., Pelletier, G., and Camilleri, C. (2008). Quantitative trait loci mapping in five new large recombinant inbred line populations of Arabidopsis thaliana genotyped with consensus single-nucleotide polymorphism markers. Genetics 178, 2253-2264.

Stranska, J., Snegaroff, J., Tylichova, M., Kopecny, D., and Sebela, M. (2008). Cloning and expression of plant ornithine delta-aminotransferase. Febs Journal 275, 177-177.

Tellier, F., Fritz, R., Kerhoas, L., Ducrot, P.H., Einhorn, J., Carlin-Sinclair, A., and Leroux, P. (2008). Characterization of metabolites of fungicidal cymoxanil in a sensitive strain of Botrytis cinerea. J Agric Food Chem 56, 8050-8057.

Thibeault-Martel, M., Krause, C., Morin, H., and Rossi, S. (2008). Cambial activity and intra-annual xylem formation in roots and stems of Abies balsamea and Picea mariana. Ann Bot (Lond) 102, 667-674.

Truernit, E., Bauby, H., Dubreucq, B., Grandjean, O., Runions, J., Barthelemy, J., and Palauqui, J.C. (2008). High-resolution whole-mount imaging of three-dimensional tissue organization and gene expression enables the study of Phloem development and structure in Arabidopsis. Plant Cell 20, 1494-1503.

Truernit, E., and Haseloff, J. (2008). Arabidopsis thaliana outer ovule integument morphogenesis: ectopic expression of KNAT1 reveals a compensation mechanism. BMC Plant Biol 8, 35.

Truernit, E., and Haseloff, J. (2008). A simple way to identify non-viable cells within living plant tissue using confocal microscopy. Plant Methods 4, 15.

Tylichova, M., Briozzo, P., Kopecny, D., Ferrero, J., Morera, S., Joly, N., Snegaroff, J., and Sebela, M. (2008). Purification, crystallization and preliminary crystallographic study of a recombinant plant aminoaldehyde dehydrogenase from Pisum sativum. Acta Crystallographica Section F-Structural Biology and Crystallization Communications 64, 88-90.

Ulker, B., Peiter, E., Dixon, D.P., Moffat, C., Capper, R., Bouche, N., Edwards, R., Sanders, D., Knight, H., and Knight, M.R. (2008). Getting the most out of publicly available T-DNA insertion lines. Plant J 56, 665-677.

Uyttewaal, M., Arnal, N., Quadrado, M., Martin-Canadell, A., Vrielynck, N., Hiard, S., Gherbi, H., Bendahmane, A., Budar, F., and Mireau, H. (2008). Characterization of Raphanus sativus pentatricopeptide repeat proteins encoded by the fertility restorer locus for Ogura cytoplasmic male sterility. Plant Cell 20, 3331-3345.

Uyttewaal, M., Mireau, H., Rurek, M., Hammani, K., Arnal, N., Quadrado, M., and Giege, P. (2008). PPR336 is associated with polysomes in plant mitochondria. J Mol Biol 375, 626-636.

Valadier, M.H., Yoshida, A., Grandjean, O., Morin, H., Kronenberger, J., Boutet, S., Raballand, A., Hase, T., Yoneyama, T., and Suzuki, A. (2008). Implication of the glutamine synthetase/glutamate synthase pathway in conditioning the amino acid metabolism in bundle sheath and mesophyll cells of maize leaves. FEBS J 275, 3193-3206.

Vaucheret, H. (2008). Plant ARGONAUTES. Trends Plant Sci 13, 350-358.

Wang, Z., Luo, Y., Li, X., Wang, L., Xu, S., Yang, J., Weng, L., Sato, S., Tabata, S., Ambrose, M., Rameau, C., Feng, X., Hu, X., and Luo, D. (2008). Genetic control of floral zygomorphy in pea (Pisum sativum L.). Proc Natl Acad Sci U S A 105, 10414-10419.

Weston, D.E., Elliott, R.C., Lester, D.R., Rameau, C., Reid, J.B., Murfet, I.C., and Ross, J.J. (2008). The Pea DELLA proteins LA and CRY are important regulators of gibberellin synthesis and root growth. Plant Physiol 147, 199-205.

Wilson, A., Punginelli, C., Gall, A., Bonetti, C., Alexandre, M., Routaboul, J.M., Kerfeld, C.A., van Grondelle, R., Robert, B., Kennis, J.T., and Kirilovsky, D. (2008). A photoactive carotenoid protein acting as light intensity sensor. Proc Natl Acad Sci U S A 105, 12075-12080.

Zabotina, O.A., van de Ven, W.T., Freshour, G., Drakakaki, G., Cavalier, D., Mouille, G., Hahn, M.G., Keegstra, K., and Raikhel, N.V. (2008). Arabidopsis XXT5 gene encodes a putative alpha-1,6-xylosyltransferase that is involved in xyloglucan biosynthesis. Plant J 56, 101-115.

2007

Chiurugwi T, Pouteau S, Nicholls D, Tooke F, Ordidge M, Battey N (2007) Floral meristem indeterminacy depends on flower position and is facilitated by acarpellate gynoecium development in Impatiens balsamina L. New Phytol 173, 79-90 (PubMed)

Dadejová M, Lim YK, Soucková-Skalická K, Matyásek R, Grandbastien M-A, Leitch AR and Kovarík A (2007) Transcription activity of rRNA genes correlates with their tendency towards intergenomic homogenisation in Nicotiana allotetraploids. New Phytol 174, 658-668 (PubMed)

Desprez T, Juraniec M, Crowell E, Jouy H, Pochylova Z, Parcy F, Höfte H, Gonneau M and Vernhettes S. (2007) Organization of cellulose synthase complexes involved in primary cell wall synthesis in Arabidopsis thaliana. Proc Natl Acad Sci, in press

Divol F, Vilaine F, Thibivilliers, Kusiak C, Sauge M-H, Dinant S (2007) Involvement of the xyloglucan endotransglycosylase/hydrolases encoded by celery XTH1 and Arabidopsis XTH33 in the phloem response to aphids. Plant Cell Environ 30, 187-20. (PubMed)

Do C-T, Pollet B, Thévenin J, Sibout R, Denoue D, Barrière Y, Lapierre C, Jouanin L.(2007) Both caffeoyl CoA enzyme 3-O-methyltransferase and caffeic acid O-methyltransferase I are involved in redundant functions for lignins, flavonoids and sinapoyl malate biosynthesis in Arabidopsis. Planta, 226, 1117-29 (PubMed)

Emons, A-MC., Höfte, H., Mulder, BM. (2007) Microtubules and Cellulose Microfibrills, how intimate is their relation? Trends in Plant Science, 279-81. (PubMed

Gy, V Gasciolli, D Lauressergues, J-B Morel, J Gombert, F Proux, C Proux, H Vaucheret, and AC. Mallory (2007) Plant Cell Arabidopsis FIERY1, XRN2, and XRN3 Are Endogenous RNA Silencing Suppressors Nov;19(11):3451-61(PubMed) and free download

Hématy, K., Sado, P-E., Van Tuinen, A., Rochange, S., Desnos, T., Balzergue, S., Pelletier, S., Renou, J-P., and Höfte, H. (2007) A Receptor-Like Kinase mediates the response of Arabidopsis cells to the inhibition of cellulose synthesis. Current Biology, 17, 922-931. (PubMed)

Kannangara, R., Branigan, C., Liu, Y., Penfield, T., Rao, V., Mouille, G., Höfte, H., Pauly, M., Riechmann, J-L., and Broun, P. (2007) The transcription factor WIN1/SHN1 regulates Cutin biosynthesis Arabidopsis thaliana. Plant Cell 19, 1278-1294. (PubMed)

Le QH, Melayah D, Bonnivard E, Petit M and Grandbastien M-A (2007). Distribution dynamics of the Tnt1 retrotransposon in tobacco. Mol Gen Genet 278, 639-651 (PubMed)

Lim KY, Kovarik A, Matyasek R, Chase MW, Clarkson JJ, Grandbastien M-A, Leitch AR (2007) Near complete genome turnover in five million years of plant evolution. New Phytol 175, 756–763 (PubMed)

Mouille G., Ralet M.-C., Cavelier C., Eland C., Effroy D., Hématy, K., McCartney L., Truong H.N., Gaudon V., Thibault J.-F. , Marchant A., Höfte H. (2007) Homogalacturonan synthesis in Arabidopsis thaliana requires a novel Golgi-localized protein with a putative methyl-transferase domain. Plant J 50, 605-614 (PubMed)

Mourrain P, van Blockland R, Kooter J, Vaucheret H (2007) A single transgene locus triggers both transcriptional and post-transcriptional silencing through double-stranded RNA production. Planta 225, 365-79 (PubMed)

Petit M, Lim KY, Julio E, Poncet C, Dorlhac De Borne F, Kovarik A, Leitch AR, Grandbastien M-A and Mhiri C (2007) Differential impact of retrotransposon populations on the genome of allotetraploid tobacco (Nicotiana tabacum). Mol Gen Genet 278, 1-15 (PubMed)

Peaucelle A, Morin H, Traas J, Laufs P. (2007) Plants expressing a miR164-resistant CUC2 gene reveal the importance of post-meristematic maintenance of phyllotaxy in Arabidopsis. Development, 134, 1045-1050 (PubMed)

Ragni, L., Truernit, E., Pautot, V. (2007). KNOXing on the BELL: TALE Homeobox Genes and Meristem Activity. IJPDP1: 42-48

Tam SM, Causse M, Garchery C, Burck H, Mhiri C and Grandbastien M-A (2007) The distribution of copia-type retrotransposons and the evolutionary history of tomato and related wild species. J Evolution Biol 20,1056-1072 (PubMed)

Tessadori, F., Chupeau, M.C., Chupeau, Y., Knip, M., Germann, S., van Driel, R., Fransz, P., and Gaudin, V. (2007). Large-scale dissociation and sequential reassembly of pericentric heterochromatin in dedifferentiated Arabidopsis cells. J Cell Sci 120, 1200-1208. (PubMed)

Urbanowicz BR, Bennett AB, Del Campillo E, Catalá C, Hayashi T, Henrissat B, Höfte H, McQueen-Mason SJ, Patterson SE, Shoseyov O, Teeri TT, Rose JK. (2007) Structural Organization and a Standardized Nomenclature for Plant Endo-1,4-beta-Glucanases (Cellulases) of Glycosyl Hydrolase Family 9. Plant Physiol. 144,1693-6. (PubMed)

Zhang X, Germann S, Blus BJ, Khorasanizadeh S, Gaudin V, Jacobsen SE. (2007) The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation. Nat Struct Mol Biol. 2007 Aug 5 (PubMed

Baud S, Mendoza MS, To A, Harscoët E, Lepiniec L, Dubreucq B. (2007a) WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis. Plant J. 50, 825-838. (PubMed)

Baud S, Wuillème S, Dubreucq B, de Almeida A, Vuagnat C, Lepiniec L, Miquel M, Rochat C. (2007b) Function of plastidial pyruvate kinases in seeds of Arabidopsis thaliana. Plant J. 52, 405-419. (PubMed)

d'Andréa S, Canonge M, Beopoulos A, Jolivet P, Hartmann MA, Miquel M, Lepiniec L, Chardot T. (2007) At5g50600 encodes a member of the short-chain dehydrogenase reductase superfamily with 11beta- and 17beta-hydroxysteroid dehydrogenase activities associated with Arabidopsis thaliana seed oil bodies. Biochimie 89, 222-229. (PubMed)

Dall'Osto L, Cazzaniga S, North H, Marion-Poll A, Bassi R (2007) The aba4 mutant of Arabidopsis thaliana reveals a specific function for neoxanthin in protection against photooxidative stress. Plant Cell 19, 1048-1064 (PubMed)

Macquet A, Ralet MC, Kronenberger J, Marion-Poll A, North HM (2007a) In situ chemical and macromolecular study of the composition of Arabidopsis thaliana seed coat mucilage. Plant Cell Physiol 48, 984-999 (PubMed)

Macquet A, Ralet MC, Loudet O, Kronenberger J, Mouille G, Marion-Poll A, North HM (2007b) A naturally occurring mutation in an Arabidopsis accession affects a β-galactosidase that increases the hydrophilic potential of rhamnogalacturonan I in seed mucilage. Plant Cell 19, 3990-4006 (Pubmed)

Marinova K, Pourcel L, Weder B, Schwarz M, Barron D, Routaboul JM, Debeaujon I, Klein M. (2007) The Arabidopsis MATE transporter TT12 acts as a vacuolar flavonoid/H+ -antiporter active in proanthocyanidin-accumulating cells of the seed coat. Plant Cell. 19, 2023-2038 (PubMed)

North H, De Almeida A, Boutin JP, Frey A, To A, Botran L, Sotta B, Marion-Poll A (2007) The Arabidopsis ABA-deficient mutant aba4 demonstrates that the major route for stress-induced ABA accumulation is via neoxanthin isomers. Plant J 50, 810-824 (PubMed)

Pourcel L, Routaboul JM, Cheynier V, Lepiniec L, Debeaujon I. (2007) Flavonoid oxidation in plants: from biochemical properties to physiological functions. Trends Plant Sci. 12, 29-36 (PubMed)

Chopin F, Orsel M, Dorbe MF, Chardon F, Truong HN, Miller AJ, Krapp A, Daniel-Vedele F (2007) The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds. Plant Cell 19, 1590-1602

Chopin F, Wirth J, Dorbe M-F, Lejay L, Krapp A, Gojon A, Daniel-Vedele F (2007) The Arabidopsis nitrate transporter AtNRT2.1 is targeted to the root plasma membrane. Plant Physiology and Biochemistry 45, 630-635

Debouba M, Maaroufi-Dghimi H, Suzuki A, Ghorbel MH, Gouia H (2007) Changes in growth and activity of enzymes involved in nitrate reduction and ammonium assimilation in tomato seedlings in response to NaCl stress. Ann Bot (Lond) 99, 1143-1151

Deprost D, Yao L, Sormani R, Moreau M, Leterreux G, Nicolai M, Bedu M, Robaglia C, Meyer C (2007) The Arabidopsis TOR kinase links plant growth, yield, stress resistance and mRNA translation. EMBO Rep 8, 864-870

Gallais A, Coque M, Le Gouis J, Prioul JL, Hirel B, Quillere I (2007) Estimating the Proportion of Nitrogen Remobilization and of Postsilking Nitrogen Uptake Allocated to Maize Kernels by Nitrogen-15 Labeling. Crop Science 47, 685-691

Hirel B, Chardon F, Durand J (2007) The contribution of molecular physiology to the improvement of nitrogen use efficiency in crops. Journal of Crop Science and Biotechnology 10, 123-132

Hirel B, Le Gouis J, Ney B, Gallais A (2007) The challenge of improving nitrogen use efficiency in crop plants: towards a more central role for genetic variability and quantitative genetics within integrated approaches. J Exp Bot 58, 2369-2387

Kichey T, Hirel B, Heumez E, Dubois F, Le Gouis J (2007) In winter wheat (Triticum aestivum L.), post-anthesis nitrogen uptake and remobilisation to the grain correlates with agronomic traits and nitrogen physiological markers. Field Crops Research 102, 22-32

Loudet O, Saliba-Colombani V, Camilleri C, Calenge F, Gaudon V, Koprivova A, North KA, Kopriva S, Daniel-Vedele F (2007) Natural variation for sulfate content in Arabidopsis thaliana is highly controlled by APR2. Nat Genet 39, 896-900

Martinelli T, Whittaker A, Bochicchio A, Vazzana C, Suzuki A, Masclaux-Daubresse C (2007) Amino acid pattern and glutamate metabolism during dehydration stress in the 'resurrection' plant Sporobolus stapfianus: a comparison between desiccation-sensitive and desiccation-tolerant leaves. J Exp Bot 58, 3037-3046

Martinelli T, Whittaker A, Masclaux-Daubresse C, Farrant JM, Brilli F, Loreto F, Vazzana C (2007) Evidence for the presence of photorespiration in desiccation-sensitive leaves of the C4 'resurrection' plant Sporobolus stapfianus during dehydration stress. J Exp Bot 58, 3929-3939

Masclaux-Daubresse C, Purdy S, Lemaitre T, Pourtau N, Taconnat L, Renou JP, Wingler A (2007) Genetic variation suggests interaction between cold acclimation and metabolic regulation of leaf senescence. Plant Physiol 143, 434-446

Mouille G, Ralet MC, Cavelier C, Eland C, Effroy D, Hematy K, McCartney L, Truong HN, Gaudon V, Thibault JF, Marchant A, Hofte H (2007) Homogalacturonan synthesis in Arabidopsis thaliana requires a Golgi-localized protein with a putative methyltransferase domain. Plant J 50, 605-614

Orsel M, Chopin F, Leleu O, Smith SJ, Krapp A, Daniel-Vedele F, Miller AJ (2007) Nitrate signalling and the two component high affinity uptake system in Arabidopsis. Plant Signalling and behaviour 2, 260-262

Sormani R, Yao L, Menand B, Ennar N, Lecampion C, Meyer C, Robaglia C (2007) Saccharomyces cerevisiae FKBP12 binds Arabidopsis thaliana TOR and its expression in plants leads to rapamycin susceptibility. BMC Plant Biol 7, 26

Tavernier V, Cadiou S, Pageau K, Lauge R, Reisdorf-Cren M, Langin T, Masclaux-Daubresse C (2007) The plant nitrogen mobilization promoted by Colletotrichum lindemuthianum in Phaseolus leaves depends on fungus pathogenicity. J Exp Bot 58, 3351-3360

Wirth J, Chopin F, Santoni V, Viennois G, Tillard P, Krapp A, Lejay L, Daniel-Vedele F, Gojon A (2007) Regulation of root nitrate uptake at the NRT2.1 protein level in Arabidopsis thaliana. J Biol Chem 282, 23541-23552

A. M. Chèvre, K. Adamczyk, F. Eber, V. Huteau, O. Coriton, J.C. Letanneur, C. Laredo, E. Jenczewski et H. Monod (2007) Modelling gene flow between oilseed rape and wild radish. I. Evolution of chromosome structure. Theoretical & Applied Genetics. 114, 209-22. (pdf)

Budar F, Berthomé R. (2007) Cytoplasmic male sterilities and mitochondrial gene mutations in land plants. Logan, D. C. Plant Mitochondria. Blackwell Publishing 31, 278-307.

Chelysheva L, Gendrot G, Vezon D, Doutriaux MP, Mercier R, Grelon M. (2007) Zip4/Spo22 is required for class I CO formation but not for synapsis completion in Arabidopsis thaliana.PLoS Genet 3(5), e83.

Délye, C. Menchari, Y. Guillemin, J.P. Matéjicek, A. Camilleri, C. Chauvel, B. (2007) Status of black grass (Alopecurus myosuroides) resistance to acetyl-coenzyme A carboxylase inhibitors in France. Weed Research 47, 95-105.

De Muyt A, Vezon D, Gendrot G, Gallois J.L, Stevens R, Grelon M. (2007) AtPRD1 is required for meiotic double strand break formation in Arabidopsis thaliana. Embo J 26(18) 41, 26-37.

Drouaud, J.Mercier, R.Chelysheva, L.Berard, A.Falque, M.Martin,O.Zanni,V.Brunel, D.Mezard, (2007) C.Sex-specific crossover distributions and variations in interference level along Arabidopsis thaliana chromosome 4. PLoS Genet 36, e106.

Falque, M., R. Mercier, C. Mezard, D. de Vienne and O. C. Martin (2007) Patterns of recombination and MLH1 foci density along mouse chromosomes: modeling effects of interference and obligate chiasma. Genetics.

Foo, E., S. E. Morris, K. Parmenter, N. Young, H. Wang, A. Jones, C. Rameau, C. G. Turnbull and C. A. Beveridge (2007) Feedback regulation of xylem cytokinin content is conserved in pea and Arabidopsis. Plant Physiol 143(3), 1418-28.

Giancola, S., Y. Rao, S. Chaillou, S. Hiard, A. Martin-Canadell, G. Pelletier and F. Budar (2007) Cytoplasmic suppression of Ogura cytoplasmic male sterility in European natural populations of Raphanus raphanistrum. Theor Appl Genet 114, 1333-1343.

Granier F, Bouchez D. (2007) Mutant Libraries: a High-throughput Arabidopsis Reverse Genetics System. Morot-Gaudry J.F, Lea P, Briat J.F. Title: Functional Plant Genomics. Science Publishers 143-164.

Johnson X, Bouchez D. (2007) The model species, Arabidopsis thaliana. Morot-Gaudry J.F, Lea P, Briat J.F. Functional Plant Genomics. Science Publishers 385-396.

Lahmy S, Guilleminot J, Schmit A.C, Pelletier G, Chaboute M.E, Devic M. (2007) QQT proteins colocalize with microtubules and are essential for early embryo development in Arabidopsis. Plant J 50(4), 615-26.

Loudet O., Saliba-Colombani V., Camilleri C., Calenge F., Gaudon V., Koprivova A., North K.A., Kopriva S., Daniel-Vedele F. (2007) Natural variation for sulfate content in Arabidopsis is highly controlled by APR2 . Nature Genetics 39, 896-900. (pdf)

Macquet A, Ralet M.C, Loudet O, Kronenberger J, Mouille G, Marion-Poll A, North H.M. (2007) A naturally occurring mutation in an Arabidopsis accession affects a beta-D-galactosidase that increases the hydrophilic potential of rhamnogalacturonan I in seed mucilage. Plant Cell 19(12), 3990-4006.

Mazier, M.Botton, E.Flamain, F.Bouchet, J. P.Courtial,B.Chupeau,M.C.Chupeau, Y.Maisonneuve, B.Lucas, H.(2007) Successful gene tagging in lettuce using the Tnt1 retrotransposon from tobacco. Plant Physiol 144, 18-31.

Nicaise, V., J. L. Gallois, F. Chafiai, L. M. Allen, V. Schurdi-Levraud, K. S. Browning, T. Candresse, C. Caranta, O. Le Gall and S. German-Retana (2007) Coordinated and selective recruitment of eIF4E and eIF4G factors for potyvirus infection in Arabidopsis thaliana. FEBS Lett 581(5), 1041-6.

Nicolas S, G. LeMignon, F. Eber, O. Coriton, H. Monod, V. Clouet, V. Huteau, A. Lostanlen, R. Delourme, B. Chalhoub, C. D. Ryder, A.-M. Chèvre et E. Jenczewski (2007) Homeologous recombination is responsible for most of the rearrangements that occur during meiosis of Brassica napus haploids. Genetics. 175, 487 503(StephGenetics2007. (pdf )

Pastuglia M, Bouchez D. (2007) Molecular encounters at microtubule ends in the plant cell cortex. Curr Opin Plant Biol 10(6), 557-63.

Pelletier G, Durand-Tardif M, Doré C. (2007) Evolution des pratiques de l'amélioration des plantes cultivées. Acta Bot. Gallica. 154(3), 353-362.

Pierre M, Traverso J.A, Boisson B, Domenichini S, Bouchez D, Giglione C, Meinnel T. (2007) N-myristoylation regulates the SnRK1 pathway in Arabidopsis. Plant Cell 19(9), 2804-21.

Prioul-Gervais, S., G. Deniot, E. M. Receveur, A. Frankewitz, M. Fourmann, C. Rameau, M. L. Pilet-Nayel and A. Baranger (2007) Candidate genes for quantitative resistance to Mycosphaerella pinodes in pea (Pisum sativum L.). Theor Appl Genet 114(6), 971-84.

Triques, K.Sturbois, B.Gallais, S.Dalmais, M.Chauvin, S.Clepet, C.Aubourg, S.Rameau, C.Caboche, M.Bendahmane, A.(2007) Characterization of Arabidopsis thaliana mismatch specific endonucleases: application to mutation discovery by TILLING in pea. Plant J.

Trouiller, B.Charlot, F.Choinard, S.Schaefer, D. G.Nogue, F.(2007) Comparison of gene targeting efficiencies in two mosses suggests that it is a conserved feature of Bryophyte transformation. Biotechnol Lett 29, 1591-1598.

Vignard J , Siwiec T , Chelysheva L, Vrielynck N, Gonord F, Armstrong SJ, Schlögelhofer P, R Mercier. (2007) The interplay of RecA-related proteins and the MND1-HOP2 complex during meiosis in Arabidopsis thaliana..PLoS Genet. 3(10), 1894-906.

2006

Adenot X, Elmayan T, Lauressergues D, Boutet S, Bouché N, Gasciolli V, Vaucheret H (2006) DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7. Curr Biol 16, 927-932 (PubMed)

Barrière Y, Denoue D, Briand M, Simon M, Jouanin L, Durand-Tardif M (2006) Genetic variations of cell wall digestibility related traits in floral stems of Arabidopsis thaliana accessions as a basis for the improvement of the feeding value in maize and forage plants. Theor Appl Genet 113, 163-175 (PubMed)

Belles-Boix E, Hamant O, Witiak S M, Morin H, Traas J, and Pautot V (2006) KNAT6: An Arabidopsis homeobox gene involved in meristem activity and organ separation. Plant Cell 18, 1900-1907 (PubMed)

Bouché N, Lauressergues D, Gasciolli V, Vaucheret H (2006) An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs. EMBO J 25, 3347-3356 (PubMed)

Da Costa M, Bach L, Landrieu I, Bellec Y, Catrice O, Brown S, De Veylder L, Lippens G, Inze D, Faure J-D (2006) Arabidopsis PASTICCINO2 Is an Antiphosphatase Involved in Regulation of Cyclin-Dependent Kinase A. Plant Cell 18, 1426-1437.(PubMed)

Eudes A, Pollet B, Sibout R, Do C-T, Séguin A, Lapierre C, Jouanin L (2006) Evidence for a role of AtCAD1 in lignification of elongating stems of Arabidopsis thaliana Planta 225, 23-39 (PubMed)

Germann S, Juul-Jensen T, Letarnec B, Gaudin V (2006) DamID, a new tool for studying plant chromatin profiling in vivo, and its use to identify putative LHP1 target loci. Plant J 48, 153-163 (PubMed)

Kopecny D, Tarkowski P, Majira A, Bouchez-Mahiout I, Nogué F, Lauriere M, Sandberg G, Laloue M, Houba-Hérin N (2006) Probing cytokinin homeostasis in Arabidopsis thaliana by constitutively overexpressing two forms of the maize cytokinin oxidase/dehydrogenase 1 gene. Plant Sci 171, 114-122

Minic Z, Jouanin L (2006) Plant glycoside hydrolases in cell wall polysaccharide degradation. Plant Physiol Biochem 44, 435-449 (PubMed)

Minic Z, Do C-T, Rihouey C, Morin H, Lerouge P, Jouanin L (2006) Purification, functional characterization, cloning, and identification of mutants of a seed specific arabinan hydrolase in Arabidopsis. J Exp Bot 57, 2339-2351 (PubMed)


Mouille G, Witucka-Wall H, Bruyant, M-P, Loudet O, Pelletier S, Rihouey C, Lerouxel O, Lerouge P, Höfte H, Pauly M (2006) QTL analysis of primary cell wall composition in Arabidopsis thaliana. Plant Physiol 141, 1035-44 (PubMed)

Mourrain P, van Blockland R, Kooter J, Vaucheret H (2006) A single transgene locus triggers both transcriptional and post-transcriptional silencing through double-stranded RNA production. Planta DOI 10.1007/s00425-006-0366-1

Muller R, Borghi L, Kwiatkowska D, Laufs P, Simon R (2006) Dynamic and compensatory responses of Arabidopsis shoot and floral meristems to CLV3 signaling Plant Cell 18, 1188-1198

Mulligan EA, Ferry N, Jouanin L, Walters KFA, Port GR, Gatehouse AMR (2006) Comparing the impact of conventional pesticide and use of a transgenic pest-resistant crop on the beneficial carabid beetle Pterostichus melanarius. Pest Manag Sci 62, 999-1012.

Nikovics K, Blein T, Peaucelle A, Ishida T, Morin H, Aida M, Laufs P (2006) The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis. Plant Cell 18, 2929-2945 (PubMed)

Pouteau S, Ferret V, Lefebvre D (2006) Comparison of environmental and mutational variation in flowering time in Arabidopsis. J Exp Bot 57, 4099-4109 (PubMed)

Rajagopalan R, Vaucheret H, Trejo J, Bartel DP (2006) A diverse and evolutionarily fluid set of miRNAs in Arabidopsis thaliana. Genes Dev 20, 3407-3425

de Reuille P B, Bohn-Courseau I, Ljung K, Morin H, Carraro N, Godin C, Traas J (2006) Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis Proc Natl Acad Sci USA 103, 1627-1632

Smyczynski C, Roudier F, Gissot L, Vaillant E, Grandjean O, Morin H, Masson T, Bellec Y, Geelen D, Faure JD (2006) The Arabidopsis immunophilin PASTICCINO1 targets a NAC–like transcription factor to the nucleus during the cell cycle. J Biol Chem 281, 25475–25484 (PubMed)

Sorin C, Negroni L, Balliau T, Corti H, Jacquemot MP, Daventure M, Sandberg G, Zivy M, Bellini C (2006) Proteomic analysis of different mutant genotypes of Arabidopsis thaliana led to the identification of eleven proteins correlating with adventitious root development. Plant Physiol 40, 349-364

Vaucheret H, Mallory AC, Bartel DP (2006) AGO1 homeostasis entails co-expression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1. Mol Cell 22, 129-136 (PubMed)

Buitink J, Leger JJ, Guisle I, Vu BL, Wuilleme S, Lamirault G, Le Bars A, Le Meur N, Becker A, Kuster H, Leprince O. (2006) Transcriptome profiling uncovers metabolic and regulatory processes occurring during the transition from desiccation-sensitive to desiccation-tolerant stages in Medicago truncatula seeds. Plant J, 47, 735-50 (PubMed)

Baudry A, Caboche M, Lepiniec L (2006) TT8 controls its own expression in a feedback regulation involving TTG1 and homologous MYB and bHLH factors, allowing a strong and cell-specific accumulation of flavonoids in Arabidopsis thaliana. Plant J, 46, 768-779 (PubMed)

Chibani K, Ali-Rachedi S, Job C, Job D, Jullien M, Grappin P. (2006) Proteomic analysis of seed dormancy in Arabidopsis. Plant Physiol. 142, 1493-1510 (PubMed)

de Diego JG, David Rodríguez F, Rodríguez Lorenzo JL, Grappin P, Cervantes E. (2006) cDNA-AFLP analysis of seed germination in Arabidopsis thaliana identifies transposons and new genomic sequences. J Plant Physiol. 16, 452-62 (PubMed)

Frey A, Boutin JP, Sotta B, Mercier R, Marion-Poll A (2006) Regulation of carotenoid and ABA accumulation during the development and germination of Nicotiana plumbaginifolia seeds. Planta, 224, 622-632 (PubMed)

Lefebvre V, North H, Frey A, Sotta A, Seo M, Okamoto M, Nambara E, Marion-Poll A (2006) Functional analysis of Arabidopsis NCED6 and NCED9 genes indicates that ABA synthesised in the endosperm is involved in the induction of seed dormancy. Plant J, 45, 309-319 (PubMed)

Marion-Poll A, North H, Lessard P, Redondo E (2006) Identification of proteins useful for improving plant tolerance water deficit (ABA4). European patent EP 06290983

Kerhoas L, Aouak D, Cingöz A, Birlirakis N, Routaboul JM, Lepiniec L, Einhorn J (2006) Structural characterization of the major flavonoid glycosides from Arabidopsis thaliana seeds, Agric. Food. Biochem. (PubMed)

Routaboul JM, Kerhoas L, Debeaujon I, Pourcel L, Caboche M, Einhorn J, Lepiniec L (2006) Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana. Planta, 224, 96-107 (PubMed)

Seo S, Hanada A, Kuwahara A, Endo A, Okamoto M, Yamauchi Y, North H, Marion-Poll A, Sun TP, Koshiba T, Kamiya Y, Yamaguchi S, Nambara E (2006) Regulation of hormone metabolism in Arabidopsis seeds: Phytochrome regulation of abscisic acid metabolism and abscisic acid regulation of gibberellin metabolism. Plant J. 48, 354-366 (PubMed)

Tamura N, Yoshida T, Tanaka A, Rsasaki R, Bando A, Toh S, Lepiniec L, Kawakami N (2006) Isolation and characterization of high temperature resistant germination mutants of Arabidopsis thaliana. Plant Cell Physiol. 47, 1081-1094 (PubMed)

Calenge F, Saliba-Colombani V, Mahieu S, Loudet O, Daniel-Vedele F, Krapp A (2006) Natural variation for carbohydrate content in Arabidopsis. Interaction with complex traits dissected by quantitative genetics. Plant Physiol 141: 1630-1643

Chaffei C, Suzuki A, Masclaux-Daubresse C, Ghorbel MH, Gouia H (2006) [Implication of glutamate, isocitrate and malate deshydrogenases in nitrogen assimilation in the cadmium-stressed tomato]. C R Biol 329: 790-803

Debouba M, Gouia H, Suzuki A, Ghorbel MH (2006) NaCl stress effects on enzymes involved in nitrogen assimilation pathway in tomato "Lycopersicon esculentum" seedlings. J Plant Physiol 163: 1247-1258

Debouba M, Gouia H, Valadier MH, Ghorbel MH, Suzuki A (2006) Salinity-induced tissue-specific diurnal changes in nitrogen assimilatory enzymes in tomato seedlings grown under high or low nitrate medium. Plant Physiol Biochem 44: 409-419

Diaz C, Saliba-Colombani V, Loudet O, Belluomo P, Moreau L, Daniel-Vedele F, Morot-Gaudry JF, Masclaux-Daubresse C (2006) Leaf yellowing and anthocyanin accumulation are two genetically independent strategies in response to nitrogen limitation in Arabidopsis thaliana. Plant Cell Physiol 47: 74-83

Fei H, Chaillou S, Hirel B, Polowick P, Mahon JD, Vessey JK (2006) Effects of the overexpression of a soybean cytosolic glutamine synthetase gene (GS15) linked to organ-specific promoters on growth and nitrogen accumulation of pea plants supplied with ammonium. Plant Physiol Biochem 44: 543-550

Ferrario-Mery S, Besin E, Pichon O, Meyer C, Hodges M (2006) The regulatory PII protein controls arginine biosynthesis in Arabidopsis. FEBS Lett 580: 2015-2020

Fontaine JX, Saladino F, Agrimonti C, Bedu M, Terce-Laforgue T, Tetu T, Hirel B, Restivo FM, Dubois F (2006) Control of the synthesis and subcellular targeting of the two GDH genes products in leaves and stems of Nicotiana plumbaginifolia and Arabidopsis thaliana. Plant Cell Physiol 47: 410-418

Gallais A, Coque M, Quillere I, Prioul JL, Hirel B (2006) Modelling postsilking nitrogen fluxes in maize (Zea mays) using 15N-labelling field experiments. New Phytol 172: 696-707

Hirel B, Gallais A (2006) Rubisco synthesis, turnover and degradation: some new thoughts on an old problem. New Phytol 169: 445-448

Kichey T, Heumez E, Pocholle D, Pageau K, Vanacker H, Dubois F, Le Gouis J, Hirel B (2006) Combined agronomic and physiological aspects of nitrogen management in wheat highlight a central role for glutamine synthetase. New Phytol 169: 265-278

Lea US, Leydecker MT, Quillere I, Meyer C, Lillo C (2006) Posttranslational regulation of nitrate reductase strongly affects the levels of free amino acids and nitrate, whereas transcriptional regulation has only minor influence. Plant Physiol 140: 1085-1094

Martin A, Lee J, Kichey T, Gerentes D, Zivy M, Tatout C, Dubois F, Balliau T, Valot B, Davanture M, Terce-Laforgue T, Quillere I, Coque M, Gallais A, Gonzalez-Moro MB, Bethencourt L, Habash DZ, Lea PJ, Charcosset A, Perez P, Murigneux A, Sakakibara H, Edwards KJ, Hirel B (2006) Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production. Plant Cell 18: 3252-3274

Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A (2006) Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco. Plant Physiol 140: 444-456

Orsel M, Chopin F, Leleu O, Smith SJ, Krapp A, Daniel-Vedele F, Miller AJ (2006) Characterization of a two-component high-affinity nitrate uptake system in Arabidopsis. Physiology and protein-protein interaction. Plant Physiol 142: 1304-1317

Pageau K, Reisdorf-Cren M, Morot-Gaudry JF, Masclaux-Daubresse C (2006) The two senescence-related markers, GS1 (cytosolic glutamine synthetase) and GDH (glutamate dehydrogenase), involved in nitrogen mobilization, are differentially regulated during pathogen attack and by stress hormones and reactive oxygen species in Nicotiana tabacum L. leaves. J Exp Bot 57: 547-557

Pommel B, Gallais A, Coque M, Quillere I, Hirel B, Prioul JL, Andrieu B, Floriot M (2006) Carbon and nitrogen allocation and grain filling in three maize hybrids differing in leaf senescence. European Journal of Agronomy 24: 203-211

Schjoerring JK, Mack G, Nielsen KH, Husted S, Suzuki A, Driscoll S, Boldt R, Bauwe H (2006) Antisense reduction of serine hydroxymethyltransferase results in diurnal displacement of NH4+ assimilation in leaves of Solanum tuberosum. Plant J 45: 71-82

Adenot X, Elmayan T, Lauressergues D, Boutet S, Bouché N, Gasciolli V et Vaucheret H.(2006) Uncoupled production of ta-siRNAs in hypomorphic rdr6 and sgs3 mutants uncovers a role for TAS3 in AGO7- DCL4-DRB4-mediated control of leaf morphology, Current
Biology 16: 927-932.

Arnal N, Quadrado M. and Mireau H. (2006) The Arabidopsis Bio2 protein requires mitochondrial targeting to be active. Plant Mol Biol. 62(3):471-9.

Aubert G, Morin J, Jacquin F, Loridon K, Quillet M.C, Petit A, Rameau C, Lejeune-Henaut I, Huguet T, Burstin J. (2006) Functional mapping in pea, as an aid to the candidate gene selection and for investigating synteny with the model legume Medicago truncatula. Theor Appl Genet 112(6) 1024-41.

Barriere Y, Denoue D, Briand M, Simon M, Jouanin L, Durand-Tardif M. (2006) Genetic variations of cell wall digestibility related traits in floral stems of Arabidopsis thaliana accessions as a basis for the improvement of the feeding value in maize and forage plants. Theoretical and Applied Genetics. 113(1) 163-175.

Bouché N, Lauressergues D, Gasciolli V et Vaucheret H. (2006) An antagonistic function for Arabidopsis DCL2 in development and a new
function for DCL4 in generating viral siRNAs. The EMBO Journal, 26;25(14) 3347-3356.

Calenge F., Saliba-Colombani V., Mahieu S., Loudet O., Daniel-Vedele F., Krapp A. (2006) Natural variation for carbohydrate content in Arabidopsis thaliana: interaction with complex traits dissected by quantitative genetics. Plant Physiology June 23 Epub. PDF

Diaz C., Saliba-Colombani V., Loudet O., Belluomo P., Moreau L., Daniel-Vedele F., Morot-Gaudry J.-F., Masclaux-Daubresse C. (2006) Leaf yellowing and anthocyanin accumulation are two genetically independent strategies in response to nitrogen limitation in Arabidopsis thaliana. Plant and Cell Physiology 47: 74-83 6 -PDF

Drouaud J, Camilleri C, Bourguignon PY, Canaguier A, Berard A, Vezon D, Giancola S, Brunel D, Colot V, Prum B, Quesneville H ,Mezard C.(2006) Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination "hot spots". Genome Res 16:106-114.

Duroc, Y, Gaillard, C., Hiard, S., Tinchant, C, Berthomé, R, Pelletier, G and Budar, F (2006) « Nuclear expression of a cytoplasmic male sterility gene modifies mitochondrial morphology in yeast and plant cells. » Plant Science 170 :755-767. (pdf -intranet uniquement)

Frédéric Sapet, Erik Kimmel, Fabienne Granier, Delphine Steinbach-Samson, Nicolas Grimault, Farid Chétouani, Delphine Grando, Jean-Baptiste Guidier, Frédéric Potier, C Pommier, François Artiguenave and Dominique Brunel. (2006) GnpSNP : a database for storing polymorphism data JOBIM : Journées Ouvertes Biologie, Informatique, Mathématiques, Bordeaux, 5-7 juillet 2006 (poster). PDF (intranet)

Giancola S, McKhann H, Bérard A, Camilleri C, Durand S, Libeau P, Roux F, Reboud X, Gut IG and Brunel D (2006) Utilization of the three high-throughput SNP genotyping methods, the GOOD assay, Amplifluor and TaqMan, in diploid and polyploid plants. Theor Appl Genet 2 ; 1-10.

Johnson X, Brcich T, Dun E.A, Goussot M, Haurogne K, Beveridge C.A, Rameau C. (2006) Branching genes are conserved across species. Genes controlling a novel signal in pea are coregulated by other long-distance signals. Plant Physiol 142(3) 1014-26.

Jolivet S, Vezon D, Froger N ,Mercier R. ((2006)) Non conservation of the meiotic function of the Ski8/Rec103 homolog in Arabidopsis. Genes Cells 11:615-622.

Kerzendorfer C, Vignard J, Pedrosa-Harand A, Siwiec T, Akimcheva S, Jolivet S, Sablowski R, Armstrong S, Schweizer D, Mercier R ,Schlogelhofer P. (2006) The Arabidopsis thaliana MND1 homologue plays a key role in meiotic homologous pairing, synapsis and recombination. J Cell Sci 119:2486-2496.

Kliebenstein D.J., West M.A.L., van Leeuwen H., Loudet O., Doerge R.W., St.Clair D.A. (2006) Identification of QTLs controlling gene expression networks defined a priori. BMC Bioinformatics June 16 Epub. PDF

Kopecny D, Tarkowski P, Majira A, Bouchez-Mahiout I, Nogue F, Laurière M, Sandberg G, Laloue M ,Houba-Herin N. (2006) Probing cytokinin homeostasis in Arabidopsis thaliana by constitutively overexpressing two forms of the maize cytokinin oxidase/dehydrogenase 1 gene. Plant Science 171:114-122.

Leflon M, F. Eber, J.C. Letanneur, L. Chelysheva, O. Coriton, V. Huteau, B. Chalhoub, R. Delourme, C. D. Ryder, G Barker, E. Jenczewski and A.M. Chèvre (2006) Pairing and recombination at meiosis of Brassica rapa (AA) x Brassica napus (AACC) hybrids. Theoretical and Applied Genetics 113(8):1467-80. (pdf)

Liu Z, Adamczyk K, Manzanares-Dauleux M, Eber F, Lucas M.O, Delourme R, Chevre A.M, Jenczewski E. (2006) Mapping PrBn and other quantitative trait loci responsible for the control of homeologous chromosome pairing in oilseed rape (Brassica napus L.) haploids. Genetics 174(3) 1583-96.

Menchari Y, Camilleri C, Michel S, Brunel D, Dessaint F, Le Corre V, Délye C. (2006) Weed response to herbicides: regional-scale distribution of herbicide resistance alleles in the grass weed Alopecurus myosuroides Huds. New Phytologist 171 861-874.

Mouille G., Witucka-Wall H., Bruyant M.P., Loudet O., Rihouey C., Lerouxel O., Lerouge P., Hofte H., Pauly M. (2006) QTL analysis of primary cell wall composition in Arabidopsis thaliana. Plant Physiology 141: 1035-1044 - PDF

Ostrowski MF, David J, Santoni S, McKhann H, Reboud X, Le Corre V, Camilleri C, Brunel D, Bouchez D, Faure B and Bataillon T (2006). Evidence for a large-scale population structure among accessions of Arabidopsis thaliana : possible causes and consequences for the distribution of linkage disequilibrium. Molecular Ecology 15(6) ; 1507-17.

Pastuglia M, Azimzadeh J, Goussot M, Camilleri C, Belcram K, Evrard JL, Schmit AC, Guerche P and Bouchez D.(2006) Gamma-tubulin is essential for microtubule organization and development in Arabidopsis. Plant Cell 18:1412-1425 (pdf)

Perchepied L., Kroj T., Tronchet M., Loudet O., Roby D. (2006) Natural variation in partial resistance to Pseudomonas syringae is controlled by two major QTLs in Arabidopsis thaliana. PLoS ONE 1(1): e123 Paper eLink - PDF

Prosperi JM, Jenczewski E, Angevain M, Rnfort Jo.(2006) Morphologic and agronomic diversity of wild genetic resources of Medicago sativa L. collected in Spain. Genetic Resources and Crop Evolution 53: 843-856, .

Reymond M., Svistoonoff S., Loudet O., Nussaume L., Desnos T. (2006) dentification of QTL controlling root growth response to phosphate starvation in Arabidopsis thaliana. Plant, Cell and Environment 29:115-125 - PDF

Trouiller B, Schaefer DG, Charlot F ,Nogue F.(2006) MSH2 is essential for the preservation of genome integrity and prevents homeologous recombination in the moss Physcomitrella patens. Nucleic Acids Res 34:232-242.

Y. Barrière, D. Denoue, M. Briand, M. Simon, L. Jouanin and M. Durand-Tardif (2006),Genetic variation for cell walldigestibility related traits in floral stems of A. thaliana accessions as a basis for the improvement of the feeding value in maize and forage plants, Theor. Appl. Genet. 113:163-175 - PDF

Z. Liu, K. Adamczyk, M. Manzanares-Dauleux, F. Eber, M.-O. Lucas, R. Delourme, A.-M. Chèvre et E. Jenczewski (2006) Mapping PrBn and Other Quantitative Trait Loci Responsible for the Control of Homoeologous Chromosome Pairing in Oilseed Rape (Brassica napus L.) Haploids. Genetics. 174(3):1583-96 (LiuGenetics2006. (pdf)