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PUBLICATIONS SCIENTIFIQUES


Mise en surbrillance des mots recherchés:


Articles Scientifiques :

2014.

Boyer FD, de Saint Germain A, Pouvreau JB, Clavé G, Pillot JP, Roux A, Rasmussen A, Depuydt S, Lauressergues D, Frei Dit Frey N, Heugebaert TS, Stevens CV, Geelen D, Goormachtig S, Rameau C (2014) New strigolactone analogs as plant hormones with low activities in the rhizosphere. Mol Plant 7: 675-90

Burguet J, Andrey P (2014). Statistical comparison of spatial point patterns in biological imaging. PLoS One, 9, e8775

Catalan P, Chalhoub B, Chochois V, Garvin DF, Hasterok R, Manzaneda AJ, Mur LA, Pecchioni N, Rasmussen, SK Vogel, JP and Voxeur A (2014). Update on the genomics and basic biology of Brachypodium: International Brachypodium Initiative (IBI). Trends in plant science 19: 414-8

Chardon F, Jasinski S, Durandet M, Lecureuil A, Soulay F, Bedu M, Guerche P, Masclaux-Daubresse C (2014) QTL meta-analysis in Arabidopsis reveals an interaction between leaf senescence and resource allocation to seeds. Journal of Experimental Botany 65:3949-62

David LC , Dechorgnat J,  Berquin P, Routaboul JM, Debeaujon I, Daniel-Vedele F and Ferrario-Méry S. (2014). Proanthocyanidin oxidation of Arabidopsis seeds is altered inmutant of the high-affinity nitrate transporter NRT2.7. Journal of Experimental Botany 65: 885–893

Fagard M, Launay A, Clément G, Courtial J, Dellagi A, Farjad M, Krapp A, Soulié MC and Masclaux-Daubresse C (2014) . Nitrogen metabolism meets phytopathology. JExp Bot (doi: 10.1093/jxb/eru323)

Gul-Mohammed J, Arganda-Carreras I, Andrey P, Galy V, Boudier T (2014). A generic classification-based method for segmentation of nuclei in 3D images of early embryos. BMC Bioinformatics, 15, 9

Hoffmann B, Proust H, Belcram K, Labrune C, Boyer FD, Rameau C, Bonhomme S (2014) Strigolactones Inhibit Caulonema Elongation and Cell Division in the Moss Physcomitrella patens. PLoS One: 9(6):e99206. doi: 10.1371

Krapp A, David LC, Chardin C, Girin T, Marmagne A, Leprince AS, Chaillou S, Ferrario-Méry S,  Meyer C and Daniel-Vedele F (2014). Nitrate transport and signalling in Arabidopsis. Journal of Experimental Botany 65: 789–798

Petrik DL, Karlen SD, Cass CL, Padmakshan D, Lu F, Liu S, Le Bris P, Antelme S, Santoro N, Wilkerson CG, Sibout R, Lapierre C, Ralph J, and Sedbrook JC (2014). p-Coumaroyl-CoA:monolignol transferase (PMT) acts specifically in the lignin biosynthetic pathway in Brachypodium distachyon. Plant J 77, 713-726

 

2013

Arc E, Sechet J, Corbineau F, Rajjou L, Marion-Poll A (2013) ABA crosstalk with ethylene and nitric oxide in seed dormancy and germination. Front Plant Sci 4, 63

Arnaud N, Laufs P (2013) Plant development: brassinosteroids go out of bounds. Curr Biol. 23: R152-154.

Bhosale R, Jewell JB, Hollunder J, Koo AJ, Vuylsteke M, Michoel T, Hilson P, Goossens A, Howe GA, Browse J and Maere S (2013) Predicting gene function from uncontrolled expression variation among individual wild-type Arabidopsis plants. Plant Cell 25, in press.

Blein T, Pautot V, Laufs P (2013) Combinations of mutations sufficient to alter Arabidopsis leaf dissection. Plants 2: 230-247

Bonhomme S, Nogue F, Rameau C, Schaefer DG (2013) Usefulness of Physcomitrella patens for studying plant organogenesis. Methods Mol Biol 959: 21-43

Bouvier d'Yvoire M, Bouchabke-Coussa O, Voorend W, Antelm, S, Cezard L, Legee F, Lebris P, Legay S, Whitehead C, McQueen-Mason SJ, Gomez LD, Jouanin L, Lapierre C, and Sibout R (2013). Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon. Plant J. 73, 496-508.

Braybrook S.A., and Peaucelle A. 2013. Mechano-Chemical Aspects of Organ Formation in Arabidopsis thaliana: The Relationship between Auxin and Pectin. PLoS ONE 8, e57813.

Chardon F., Bedu M., Calenge F., Klemens P.A.W., Spinner L., Clement G., Chietera G., Léran S., Ferrand M., Lacombe B., Loudet O., Dinant S., Bellini C., Neuhaus H.E., Daniel-Vedele F., Krapp A. (2013) Leaf fructose content is controlled by the vacuolar transporter SWEET17 in Arabidopsis. Current Biology  23(8): 697-702 

Chen VX, Boyer FD, Rameau C, Pillot JP, Vors JP, Beau JM (2013) New synthesis of A-ring aromatic strigolactone analogues and their evaluation as plant hormones in pea (Pisum sativum). Chemistry 19: 4849-4857

Chupeau MC, Granier F, Pichon O, Renou JP, Gaudin V and Chupeau Y (2013) Characterization of the early events leading to totipotency in an Arabidopsis protoplast liquid culture by temporal transcript profiling. Plant Cell 25, Epub ahead of print.

Crismani, W., and Mercier, R. (2013) Plant Meiosis, Plant Meiosis (Pawlowski, W. P., Grelon, M., and Armstrong, S., Eds.), pp 227–234. Humana Press, Totowa, NJ.

Crismani, W., Portemer, V., Froger, N., Chelysheva, L., Horlow, C., Vrielynck, N., and Mercier, R. (2013) MCM8 Is Required for a Pathway of Meiotic Double-Strand Break Repair Independent of DMC1 in Arabidopsis thaliana., PLoS genetics 9, e1003165.

Crismani, W., Girard, C., and Mercier, R. (2013) Tinkering with meiosis., Journal of experimental botany 64, 55–65

Dalmais M, Antelme S, Ho-Yue-Kuang S, Wang Y, Darracq O, Bouvier d’Yvoire M, Cézard L, Légée F, Blondet E, Oria N, Troadec C, Brunaud V, Jouanin L, Höfte H, Bendahmane A, Lapierre C, Sibout R (2013). A TILLING Platform for Functional Genomics in Brachypodium distachyon. Plos One. 8: e65503.

de Saint Germain A, Bonhomme S, Boyer FD, Rameau C (2013) Novel insights into strigolactone distribution and signalling. Curr Opin Plant Biol 16: 583-589

de Saint Germain A, Ligerot Y, Dun EA, Pillot JP, Ross JJ, Beveridge CA, Rameau C
(2013) Strigolactones stimulate internode elongation independently of gibberellins. Plant Physiol 163: 1012-25

Domenek S, Louaifi A, Guinault A and Baumberger S (2013). Potential of lignins as antioxidant additive in active biodegradable packaging materials. J. Polym. The Environ., 21: 692-701.

Dun EA, de Saint Germain A, Rameau C, Beveridge CA (2013) Dynamics of strigolactone function and shoot branching responses in Pisum sativum. Mol Plant 6: 128-140

Fernandez A, Hilson P and Beeckman T (2013) GOLVEN peptides as important regulatory signaling molecules of plant development. J. Exp. Bot. 64, in press.

Gaufichon L, Masclaux-Daubresse C, Tcherkez G, Reisdorf-Cren M, Sakakibara Y, Hase T, Clément G, Avice J, Grandjean O, Marmagne A, Boutet-Mercey S, Azzopardi M, Soulay F, Suzuki A (2013) Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth. Plant Cell and Environment 36: 328-342

Geshi N., Johansen J.N., Dilukpimol A., Rolland A., Belcram K., Kutake T., Tsumuraya Y., Kaneko S., Tryfona D., Dupree P., Scheller, H.V., Hofte, H. and Mouille, G. (2013). A galactosyltransferase acting on arabinogalactan protein glycans is essential for embryo development in Arabidopsis. Plant Journal doi: 10.1111/tpj.12281

Guiboileau A, Avila-Ospina L, Yoshimoto K, Soulay F, Azzopardi M, Marmagne A, Lothier J, Masclaux-Daubresse C (2013) Physiological and metabolic consequences of autophagy defisciency for the management of nitrogen and protein resources in Arabidopsis leaves depending on nitrate availability. New Phytologist in press doi: 10.1111/nph.12307

Gobron N, Waszcak C, Simon M, Hiard S, Boivin S, Charif D, Ducamp A, Wenes E, Budar F (2013) A Cryptic Cytoplasmic Male Sterility Unveils a Possible Gynodioecious Past for Arabidopsis thaliana. PLoS ONE 8(4):e62450.

Goncalves B, Nougue O, Jabbour F, Ridel C, Morin H, Laufs P, Manicacci D, Damerval C (2013) An APETALA3 homolog controls both petal identity and floral meristem patterning in Nigella damascena L. (Ranunculaceae). Plant J doi: 10.1111/tpj.12284

Haïli N, Arnal N, Quadrado M, Amiar S, Tcherkez G, Dahan J, Briozzo P, Colas des Francs Small C, Vrielynck N, Mireau H (2013) The pentatricopeptide repeat MTSF1 protein stabilizes the nad4 mRNA in Arabidopsis mitochondria. Nucl Acids Res 41(13).

Hofte H., and Fierobe H.P. (2013). Biomasse : filière lignocellulosique, filière bois. In L'énergie à découvert, R. Mosseri and C. Jeandel, eds. (CNRS éditions), pp. 138-139.

Jenczewski, E., Mercier, R., Macaisne, N., and Mezard, C. (2013) Meiosis: Recombination and the Control of Cell Division, in Plant Genome Diversity Volume 2 (Greilhuber, J., Dolezel, J., and Wendel, J. F., Eds.), pp 121–136. Springer Vienna, Vienna.

Jolivet P, Acevedo F, Boulard C, d'Andrea S, Faure JD, Kohli, A, Nesi, N, Valot, B, Chardot, T. (2013) Crop seed oil bodies: From challenges in protein identification to an emerging picture of the oil body proteome. Proteomics 13: 1836-1849.

Jolivet P, Deruyffelaere C, Boulard C, Quinsac A, Savoire R, Nesi N, Chardot T (2013) Deciphering the structural organization of the oil bodies in the Brassica napus seed as a mean to improve the oil extraction yield. Ind Crop Prod 44: 549-557

Julié-Galau S, Bellec Y, Faure J-D, Tepfer M (2013) Evaluation of the potential for interspecific hybridization between Camelina sativa and related wild Brassicaceae in anticipation of field trials of GM camelina. Transgenic research. doi: 10.1007/s11248-013-9722-7

Kubienova L, Kopecny D, Tylichova M, Briozzo P, Skopalova J, Sebela M, Navratil M, Tache R, Luhova L, Barroso JB, Petrivalsky M (2013) Structural and functional characterization of a plant S-nitrosoglutathione reductase from Solanum lycopersicum. Biochimie 95: 889-902

Legland D, Beaugrand J (2013). Automated clustering of lignocellulosic fibres based on morphometric features and using clustering of variables. Industrial Crops and Products, 45, 253-261

Lounifi I, Arc E, Molassiotis A, Job D, Rajjou L, Tanou G (2013) Interplay between protein carbonylation and nitrosylation in plants. Proteomics 13, 568-578

Marchive C, Roudier F, Castaings L, Bréhaut V,  Blondet E, Colot V, Meyer C and Krapp A (2013). Nuclear retention of the transcription factor NLP7 orchestrates the early response to nitrate in plants. Nat. Commun 4:1713.

Martinez de Alba, A.E., Parent, J.S. and Vaucheret, H. (2013) Small RNA-mediated control of development in plants. in Epigenetic Memory and Control in Plants. Grafi, G. and Ohad, N. editors. Signaling and Communication in Plants 18, DOI 10.1007/978-3-642-35227-0_9. Springer-Verlag Berlin Heidelberg, 177-189.

Moreno, A.B., Martinez de Alba, A.E., Bardou, F., Crespi, M.D., Vaucheret, H., Maizel, A. and Mallory, A.C. (2013) Cytoplasmic and nuclear quality control and turnover of single-stranded RNA modulate post-transcriptional gene silencing in plants. Nucleic Acids Res 41, 4699-4708.

Mouterde LMM, Flourat AL, Cannet MMM, Ducrot P-H and Allais F (2013). Chemoenzymatic Total Synthesis of a Naturally Occurring (5-5 ')/(8 '-O-4 '') Dehydrotrimer of Ferulic Acid. Eur. J. Org. Chem., 173-179.

Pion F, Reano AF, Ducrot P-H and Allais F (2013). Chemo-enzymatic preparation of new bio-based bis-and trisphenols: new versatile building blocks for polymer chemistry. RSC Adv. 3: 8988-8997.

Poulsen C, Vaucheret H, Brodersen P. (2013) Lessons on RNA silencing Mechanisms in Plants from Eukaryotic Argonaute Structures. Plant Cell. 2013 Jan 9. [Epub ahead of print] doi/10.1105/tpc.112.105643

Renault H, El Amrani A, Berger A -Taconnat L, Bouchereau A, Deleu C. (2013). Plant Cell Environ. 201336(5):1009-18.

Reynaud C, Tapin-Lingua S, Elegir G, Petit-Conil M and Baumberger S. (2013). Phenomena responsible for the hydrophobic properties confered to Kraft pulp by a laccase-catalyzed treatment with lauryl gallate. J. Biotechnol. 167: 302-308.

Renny-Byfield S, Kovarik A, Kelly L, Macas J, Novak P, Chase M, Nichols RA, Pancholi M, Grandbastien M-A, Leitch A (2013) Diploidisation and genome size change in allopolyploids is associated with differential dynamics of low and high copy sequences. Plant J 74: 829-839

Saez-Aguayo S, Ralet MC, Berger A, Botran L, Marion-Poll A, North HM (2013) PECTIN METHYLESTERASE INHIBITOR6 promotes Arabidopsis mucilage release by limiting methylesterification of homogalacturonan in seed coat epidermal cells. Plant Cell 25, 308-323

Silveira A.B., Trontin C., Cortijo S., Barau J., Vieira Del Bem L.E., Loudet O., Colot V., Vincentz M. (2013) Extensive natural epigenetic variation at a de novo originated gene.  PLoS Genetics  9(4): e1003437

Sipponen MH, Lapierre C, Mechin V and Baumberger S (2013). Isolation of structurally distinct lignin-carbohydrate fractions from maize stem by sequential alkaline extractions and endoglucanase treatment. Bioresour. Technol.133C: 522-528.

Snegaroff J, Bouchez I, Smaali Mel A, Pecquet C, Raison-Peyron N, Jolivet P, Lauriere M (2013) Barley gamma3-hordein: glycosylation at an atypical site, disulfide bridge analysis, and reactivity with IgE from patients allergic to wheat. Biochim Biophys Acta Proteins and Proteomics 1834: 395-403

Spinner L, Gadeyne A, Belcram K, Goussot M, Moison M, Duroc Y, Eeckhout D, De Winne N, Schaefer E, Van De Slijke E, Persiau G, Witters E, Gevaert K, De Jaeger G, Bouchez D, Van Damme D and Pastuglia M (2013). A protein phosphatase 2A complex spatially controls plant cell division. Nature Comunications, in press

Tisné S., Serrand Y., Bach L., Gilbault E., Ben Ameur R., Balasse H., Voisin R., Bouchez D., Durand-Tardif M., Guerche P., Chareyron G., Da Rugna J., Camilleri C., Loudet O. (2013)  PHENOSCOPE: an automated large-scale phenotyping platform offering high spatial homogeneity. The Plant Journal  74: 534-544 

Vaucheret, H. and Masson, J. (2013) Les plantes aussi se soignent aux petits ARN. Biofutur 340, 39.

Vindigni JD, Wien F, Giuliani A, Erpapazoglu Z, Tache R, Jagic F, Chardot T, Gohon Y, Froissard M (2013) Fold of an oleosin biologically targeted into cellular oil bodies. Biochim Biophys Acta Biomembranes 1828: 1881-1888

Vilaine F, Kerchev P, Clement G, Batailler B, Cayla T, Bill L, Gissot L, Dinant S (2013) Increased Expression of a Phloem Membrane Protein Encoded by NHL26 Alters Phloem Export and Sugar Partitioning in Arabidopsis. Plant Cell 25: 1689-1708

Wang Y, Chantreau M, Sibout R,Hawkins S (2013). Plant cell wall lignification and monolignol metabolism. Front Plant Sci. 4 : 220.

Zhong, S.H., Liu, J.Z., Jin, H., Lin, L., Li, Q., Chen, Y., Yuan, Y.X., Wang, Z.Y., Huang, H., Qi, Y.J. et al. (2013) Warm temperatures induce transgenerational epigenetic release of RNA silencing by inhibiting siRNA biogenesis in Arabidopsis. Proc Natl Acad Sci U S A  110, 9171-9176.



2012

Acevedo, F., Rubilar, M., Shene, C., Navarrete, P., Romero, F., Rabert, C., Jolivet, P., Valot, B., and Chardot, T. (2012). Seed Oil Bodies from Gevuina avellana and Madia sativa. Journal of agricultural and food chemistry 60, 6994-7004.

Akroun M, Jannin L, Laîné P, Etienne P, Masclaux-Daubresse C, Citerne S, Garnica M, Garcia-Mina J, Yvin J, Ourry A. (2012). A physiological and molecular study of the effects of nickel defisciency and phenylphosphorodiamidate (PPD) application on urea metabolism in oilseed rape (Brassica napus L.). Plant Soil.

Amiour, N., Imbaud, S., Clement, G., Agier, N., Zivy, M., Valot, B., Balliau, T., Armengaud, P., Quillere, I., Canas, R., Tercet-Laforgue, T., and Hirel, B. (2012). The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize. Journal of experimental botany 63, 5017-5033.

Barriere, Y., Mechin, V., Lefevre, B., and Maltese, S. (2012). QTLs for agronomic and cell wall traits in a maize RIL progeny derived from a cross between an old Minnesota13 line and a modern Iodent line. Theoretical and Applied Genetics 125, 531-549.

Barthole, G., Lepiniec, L., Rogowsky, P.M., and Baud, S. (2012). Controlling lipid accumulation in cereal grains. Plant Sci 185-186, 33-39.

Batailler, B., Lemaitre, T., Vilaine, F., Sanchez, C., Renard, D., Cayla, T., Beneteau, J., and Dinant, S. (2012). Soluble and filamentous proteins in Arabidopsis sieve elements. Plant Cell and Environment 35, 1258-1273.

Beopoulos, A., Haddouche, R., Kabran, P., Dulermo, T., Chardot, T., and Nicaud, J.M. (2012). Identification and characterization of DGA2, an acyltransferase of the DGAT1 acyl-CoA:diacylglycerol acyltransferase family in the oleaginous yeast Yarrowia lipolytica. New insights into the storage lipid metabolism of oleaginous yeasts. Applied Microbiology and Biotechnology 93, 1523-1537.

Bernard, A. et al. Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. The Plant cell 24, 3106-3118, doi:10.1105/tpc.112.099796 (2012).

Berger, N., and Dubreucq, B. (2012). Evolution goes GAGA: GAGA binding proteins across kingdoms. Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms 1819, 863-868.

Berthet S, Thévenin J, Baratiny D, Demont-Caulet N, Debeaujon I, Bidzinski P, Leple JC, Huis R, Hawkins S, Gomez LD, Lapierre C, Jouanin, L (2012) Role of plant laccases in lignin polymerization. In Lignins, biosynthesis, biodegradation and bioengineering. In Advances in Botanical Research 61, Jouanin L and Lapierre C eds (Elsevier Ltd), pp 145-172

Bigeard, J., Pflieger, D., Colcombet, J., Gérard, L., Mireau, H., and Hirt, H. (2012). Protein Complexes Characterization in Arabidopsis thaliana by Tandem Affinity Purification Coupled to Mass Spectrometry Analysis (Humana Press.

Bonhomme, S., Nogué, F., Rameau, C., and Schaefer, D.G. (2012). Usefulness of Physcomitrella patens for studying plant organogenesis. In Plant Organogenesis: Methods and Protocols, I.D. Smet, ed (New York: Humana Press.

Bouteille, M., Rolland, G., Balsera, C., Loudet, O., and Muller, B. (2012). Disentangling the Intertwined Genetic Bases of Root and Shoot Growth in Arabidopsis. Plos One 7.

Bouvier d'Yvoire, M., Bouchabke-Coussa, O., Voorend, W., Antelme, S., Cezard, L., Legee, F., Lebris, P., Legay, S., Whitehead, C., McQueen-Mason, S.J., Gomez, L.D., Jouanin, L., Lapierre, C., and Sibout, R. (2012). Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon. Plant J. DOI: 10.1111/tpj.12053

Boyer, F.D., de Saint Germain, A., Pillot, J.P., Pouvreau, J.B., Chen, V.X., Ramos, S., Stevenin, A., Simier, P., Delavault, P., Beau, J.M., and Rameau, C. (2012). Structure-activity relationship studies of strigolactone-related molecules for branching inhibition in garden pea: molecule design for shoot branching. Plant physiology 159, 1524-1544.

Brandt, R., Salla-Martret, M., Bou-Torrent, J., Musielak, T., Stahl, M., Lanz, C., Ott, F., Schmid, M., Greb, T., Schwarz, M., Choi, S.B., Quint, M., Palauqui, J.C., Martinez-Garcia, J.F., and Wenkel, S. (2012). Genome-wide binding-site analysis of REVOLUTA reveals a link between leaf patterning and light-mediated growth responses. Plant J.

Braun, N., de Saint Germain, A., Pillot, J.P., Boutet-Mercey, S., Dalmais, M., Antoniadi, I., Li, X., Maia-Grondard, A., Le Signor, C., Bouteiller, N., Luo, D., Bendahmane, A., Turnbull, C., and Rameau, C. (2012). The pea TCP transcription factor PsBRC1 acts downstream of Strigolactones to control shoot branching. Plant Physiol 158, 225-238.

Braybrook, S.A., Hofte, H., and Peaucelle, A. (2012). Probing the mechanical contributions of the pectin matrix: Insights for cell growth. Plant signaling & behavior 7.

Canas, R.A., Quillere, I., Gallais, A., and Hirel, B. (2012). Can genetic variability for nitrogen metabolism in the developing ear of maize be exploited to improve yield? New Phytol 194, 440-452.

Chapelle, A., Morreel, K., Vanholme, R., Le-Bris, P., Morin, H., Lapierre, C., Boerjan, W., Jouanin, L., and Demont-Caulet, N. (2012). Impact of the Absence of Stem-Specific beta-Glucosidases on Lignin and Monolignols. Plant physiology 160, 1204-1217.

Castelain, M., Le Hir, R., and Bellini, C. (2012). The non-DNA-binding bHLH transcription factor PRE3/bHLH135/ATBS1/TMO7 is involved in the regulation of light signaling pathway in Arabidopsis. Physiol Plant.

Chavigneau H., Goué N., Delaunay S., Courtial A., Jouanin L., Reymond M., Méchin V., Barrière Y. 2012. QTL for floral stem lignin content and degradability in three recombinant inbred line (RIL) progenies of Arabidopsis thaliana and search for candidate genes involved in cell wall biosynthesis and degradability. Open Journal of Genetics 2 : 7-30.

Chardon, F., Noel, V., and Masclaux-Daubresse, C. (2012). Exploring NUE in crops and in Arabidopsis ideotypes to improve yield and seed quality. J Exp Bot 63, 3401-3412.

Chelysheva, L., Vezon, D., Chambon, A., Gendrot, G., Pereira, L., Lemhemdi, A., Vrielynck, N., Le Guin, S., Novatchkova, M., and Grelon, M. (2012). The Arabidopsis HEI10 Is a New ZMM Protein Related to Zip3. PLoS genetics 8, e1002799.

Cortizo, M., and Laufs, P. (2012). Genetic basis of the "sleeping leaves" revealed. Proceedings of the National Academy of Sciences of the United States of America 109, 11474-11475.

Courtial A, Jourda C, Arribat S, Balzergue S, Huguet S, Reymond M, Grima-Pettenati J, Barrière Y. 2012 Comparative expression of cell wall related genes in four maize RILs and one parental line of variable lignin content and cell wall degradability. Maydica 57

Crismani, W., Girard, C., Froger, N., Pradillo, M., Santos, J.L., Chelysheva, L., Copenhaver, G.P., Horlow, C., and Mercier, R. (2012). FANCM limits meiotic crossovers. Science 336, 1588-1590.

Crismani W, Mercier R (2012) What limits meiotic crossovers? Cell cycle (Georgetown, Tex) 11: 3527–3528.

Crismani W, Girard C, Froger N, Pradillo M, Santos JL, et al. (2012) FANCM limits meiotic crossovers. Science (New York, NY) 336: 1588–1590.

Crismani W*, Portemer V*, Froger N, Chelysheva L, Horlow C, Vrielynck N, Mercier R. (2012) MCM8 is Required for a Pathway of Meiotic Double Strand Break Repair Independent of DMC1 in Arabidopsis thaliana.  PLoS Genetics. In press

Crismani W, Girard C and Mercier R. (2012) Tinkering with meiosis. Journal of Experimental Botany. In press.

Cromer, L., Heyman, J., Touati, S., Harashima, H., Araou, E., Girard, C., Horlow, C., Wassmann, K., Schnittger, A., De Veylder, L., and Mercier, R. (2012). OSD1 Promotes Meiotic Progression via APC/C Inhibition and Forms a Regulatory Network with TDM and CYCA1;2/TAM. PLoS genetics 8, e1002865.

Cubillos, F.A., Coustham, V., and Loudet, O. (2012). Lessons from eQTL mapping studies: non-coding regions and their role behind natural phenotypic variation in plants. Curr Opin Plant Biol 15, 192-198.

Cubillos, F.A., Yansouni, J., Khalili, H., Balzergue, S., Elftieh, S., Martin-Magniette, M.L., Serrand, Y., Lepiniec, L., Baud, S., Dubreucq, B., Renou, J.P., Camilleri, C., and Loudet, O. (2012). Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures. BMC Genomics 13, 117.

Debouba, M., Maaroufi-Dguimi, H., Ghorbel, M., Gouia, H., and Suzuki, A. (2012). Expression pattern of genes encoding nitrate and ammonium assimilating enzymes in Arabidopsis thaliana exposed to short term NaCl stress. Journal plant physiology (in press)

Dechorgnat, J., Patrit, O., Krapp, A., Fagard, M., and Daniel-Vedele, F. (2012). Characterization of the Nrt2.6 Gene in Arabidopsis thaliana: A Link with Plant Response to Biotic and Abiotic Stress. PloS one 7, e42491.

Denancé, N., Ranocha, P., Oria, N., Barlet, X., Rivière, M.-P., Yadeta, K.-A., Hoffmann, L., Perreau, F., Clément, .G, Maia-Grondard, A., van der Berg G.C.M., Savetti, B., Fournier, S., Aubert, Y., Pelletier, S., Thomma, B., Molina, A., Jouanin, L., Marco, Y., Goffner, D. (2012) Arabidopsis wat1 (wall are thin-1)-mediated resistance to the bacterial vascular pathogen, Ralstonia solanacearum, is accompagnied by cross-regulation of salicylic and tryptophan metabolism. Plant J, DOI: 10.1111/tpj.12027

DE PESSEMIER J, CHARDON F, JURANIEC M, DELAPLACE P, HERMANS C (2012) Natural variation of the root morphological response to nitrate supply in Arabidopsis thaliana. Mechanisms of Development "in press"

Dinant, S., and Kehr, J. (2012). Sampling and analysis of phloem sap. In Plant Mineral Nutrients: Methods and Protocols, F. Maathuis, ed (Humana Press, USA.

Dinant, S., and Lucas, W.J. (2012). Sieve Elements: Puzzling Activities Deciphered by Proteomics Studies. In Biochemistry of Phloem, G.A. Thompson and A.J.E. van Bel, eds (Cichester, UK: Wiley & Sons.

Dinant, S., and Suárez-López, P. (2012). Multitude of long-distance signal molecules acting via phloem. In Signaling and Communication in Plants, G. Witzany and F. Baluška, eds

Drevensek, S., Goussot, M., Duroc, Y., Christodoulidou, A., Steyaert, S., Schaefer, E., Duvernois, E., Grandjean, O., Vantard, M., Bouchez, D., and Pastuglia, M. (2012). The Arabidopsis TRM1-TON1 interaction reveals a recruitment network common to plant cortical microtubule arrays and eukaryotic centrosomes. Plant Cell 24, 178-191.

Dun, E.A., de Saint Germain, A., Rameau, C., and Beveridge, C.A. (2012). Antagonistic action of strigolactone and cytokinin in bud outgrowth control. Plant Physiol 158, 487-498.

Durand, S., Bouche, N., Perez Strand, E., Loudet, O., and Camilleri, C. (2012). Rapid establishment of genetic incompatibility through natural epigenetic variation. Curr Biol 22, 326-331.

Eloy, N.B., Gonzalez, N., Van Leene, J., Maleux, K., Vanhaeren, H., De Milde, L., Dhondt, S., Vercruysse, L., Witters, E., Mercier, R., Cromer, L., Beemster, G.T.S., Remaut, H., Van Montagu, M.C.E., De Jaeger, G., Ferreira, P.C.G., and Inze, D. (2012). SAMBA, a plant-specific anaphase-promoting complex/cyclosome regulator is involved in early development and A-type cyclin stabilization. Proceedings of the National Academy of Sciences of the United States of America 109, 13853-13858.

Eudes, A., George, A., Mukerjee, P., Kim, J.S., Pollet, B., Benke, P.I., Yang, F., Mitra, P., Sun, L., Cetinkol, O.P., Chabout, S., Mouille, G., Soubigou-Taconnat, L., Balzergue, S., Singh, S., Holmes, B.M., Mukhopadhyay, A., Keasling, J.D., Simmons, B.A., Lapierre, C., Ralph, J., and Loque, D. (2012). Biosynthesis and incorporation of side-chain-truncated lignin monomers to reduce lignin polymerization and enhance saccharification. Plant Biotechnol J 10, 609-620.

Frey, A., Effroy, D., Lefebvre, V., Seo, M., Perreau, F., Berger, A., Sechet, J., To, A., North, H.M., and Marion-Poll, A. (2012). Epoxycarotenoid cleavage by NCED5 fine-tunes ABA accumulation and affects seed dormancy and drought tolerance with other NCED family members. The Plant journal : for cell and molecular biology 70, 501-512.

Froissard, M, Boulard, C, (2012) Optimisation de la production de lipides d'intérêt chez la levure par génie génétique. Techniques de l’ingénieur article

Galland, M., Job, D., and Rajjou, L. (2012). The seed proteome web portal. Front Plant Sci 3, 98.

Galland M, Lounifi I, Cueff G, Baldy A, Morin H, Job D, Rajjou L (2012) A role for "omics" technologies in exploration of the seed nutritional quality. In SEED DEVELOPMENT: OMICS Technologies toward Improvement of Seed Quality and Crop Yield. Eds Agrawal GK & Rakwal R, Springer (in press)

Gaufichon, L., Masclaux-Daubresse, C., Tcherkez, G., Reisdorf-Cren, M., Sakakibara, Y., Hase, T., Clement, G., Avice, J.C., Grandjean, O., Marmagne, A., Boutet-Mercey, S., Azzopardi, M., Soulay, F., and Suzuki, A. (2012). Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth. Plant, cell & environment. doi: 10.1111/j.1365-3040.2012.02576.x

Gonneau, M., Hofte, H., and Vernhettes, S. (2012). Fluorescent tags to explore cell wall structure and dynamics. Front Plant Sci 3, 145.

Guiboileau A, Masclaux-Daubresse C. (2012). Autophagic processes in plants: Mechanisms, regulation and function. Comptes Rendus Biologies 335(6): 375-388.

Guiboileau, A., Yoshimoto, K., Soulay, F., Bataille, M.P., Avice, J.C., and Masclaux-Daubresse, C. (2012). Autophagy machinery controls nitrogen remobilization at the whole-plant level under both limiting and ample nitrate conditions in Arabidopsis. The New phytologist 194, 732-740.

Guillon, F., Larre, C., Petipas, F., Berger, A., Moussawi, J., Rogniaux, H., Santoni, A., Saulnier, L., Jamme, F., Miquel, M., Lepiniec, L., and Dubreucq, B. (2012). A comprehensive overview of grain development in Brachypodium distachyon variety Bd21. Journal of Experimental Botany 63, 739-755.

Gutierrez, L., Mongelard, G., Flokova, K., Pacurar, D.I., Novak, O., Staswick, P., Kowalczyk, M., Pacurar, M., Demailly, H., Geiss, G., and Bellini, C. (2012). Auxin Controls Arabidopsis Adventitious Root Initiation by Regulating Jasmonic Acid Homeostasis. The Plant cell 24, 2515-2527.

Harrington, M.J., Mutwil, M., Barrière, Y., and Sibout, R. (2012). Chapter 3 - Molecular Biology of Lignification in Grasses. In Advances in Botanical Research, Jouanin  and Lapierre, eds (Academic Press), pp. 77-112.

Houba-Herin, N., Hennig, L., Kohler, C., and Gaudin, V. (2012). A fruitful chromatin harvest: meeting summary of the Second European Workshop on Plant Chromatin 2011 in Versailles, France. Epigenetics : official journal of the DNA Methylation Society 7, 307-311.

Ikram, S., Bedu, M., Daniel-Vedele, F., Chaillou, S., and Chardon, F. (2012). Natural variation of Arabidopsis response to nitrogen availability. J Exp Bot 63, 91-105.

Jasinski, S., Lécureuil, A., Miquel, M., Loudet, O., Raffaele, S., Froissard, M., and Guerche, P. (2012). Natural variation in seed very long chain fatty acid content is controlled by a new isoform of KCS18 in Arabidopsis thaliana. PLoS ONE 11, e49261.

Jauvion, V., Rivard, M., Bouteiller, N., Elmayan, T., and Vaucheret, H. (2012). RDR2 partially antagonizes the production of RDR6-dependent siRNA in sense transgene-mediated PTGS. Plos One 7, e29785.

Jouannet, V., Moreno, A.B., Elmayan, T., Vaucheret, H., Crespi, M.D., and Maizel, A. (2012). Cytoplasmic Arabidopsis AGO7 accumulates in membrane-associated siRNA bodies and is required for ta-siRNA biogenesis. Embo Journal 31, 1704-1713.

Kamisugi, Y., Schaefer, D.G., Kozak, J., Charlot, F., Vrielynck, N., Hola, M., Angelis, K.J., Cuming, A.C., and Nogue, F. (2012). MRE11 and RAD50, but not NBS1, are essential for gene targeting in the moss Physcomitrella patens. Nucleic Acids Research 40, 3496-3510.

Khandal, D., Mikus, P.Y., Dole, P., Bliard, C., Soulestin, J., Lacrampe, M.F., Baumberger, S., and Coqueret, X. (2012). Tailoring the properties of thermoplastic starch by blending with cinnamyl alcohol and radiation processing: An insight into the competitive grafting and scission reactions. Radiation Physics and Chemistry 81, 986-990.

Kiani, S.P., Trontin, C., Andreatta, M., Simon, M., Robert, T., Salt, D.E., and Loudet, O. (2012). Allelic Heterogeneity and Trade-Off Shape Natural Variation for Response to Soil Micronutrient. PLoS genetics 8.

Kiba, T., Feria-Bourrellier, A.B., Lafouge, F., Lezhneva, L., Boutet-Mercey, S., Orsel, M., Brehaut, V., Miller, A., Daniel-Vedele, F., Sakakibara, H., and Krapp, A. (2012). The Arabidopsis Nitrate Transporter NRT2.4 Plays a Double Role in Roots and Shoots of Nitrogen-Straved Plants. Plant Cell 24, 245-258.

Legland, D., Devaux, M.F., Bouchet, B., Guillon, F., and Lahaye, M. (2012). Cartography of cell morphology in tomato pericarp at the fruit scale. J Microsc.

Le Masson I, Jauvion V, Bouteiller N, Rivard M, Elmayan T, Vaucheret H. Mutations in the Arabidopsis H3K4me2/3 Demethylase JMJ14 Suppress Posttranscriptional Gene Silencing by Decreasing Transgene Transcription. Plant Cell. 2012 Sep;24(9):3603-12. doi: 10.1105/tpc.112.103119. Epub 2012 Sep 21.

Lloyd, A.H., Wang, D., and Timmis, J.N. (2012). Single Molecule PCR Reveals Similar Patterns of Non-Homologous DSB Repair in Tobacco and Arabidopsis. PloS one 7.

Mameri, H., Bouchez, I., Pecquet, C., Raison-Peyron, N., Choudat, D., Chabane, H., Kerre, S., Denery-Papini, S., Gohon, Y., Briozzo, P., Lauriere, M., and Snegaroff, J. (2012). A Recombinant omega-Gliadin-like D-Type Glutenin and an alpha-Gliadin from Wheat (Triticum aestivum): Two Immunoglobulin E Binding Proteins, Useful for the Diagnosis of Wheat-Dependent Allergies. Journal of agricultural and food chemistry 60, 8059-8068.

Mameri, H., Snegaroff, J., Gohon, Y., Pecquet, C., Choudat, D., Raison-Peyron, N., Denery-Papini, S., Wien, F., and Briozzo, P. (2012). Immunoglobulin-E Reactivity and Structural Analysis of Wheat Low-Molecular-Weight Glutenin Subunits and Their Repetitive and Nonrepetitive Halves. Journal of agricultural and food chemistry.

Moreau, M., Azzopardi, M., Clement, G., Dobrenel, T., Marchive, C., Renne, C., Martin-Magniette, M.L., Taconnat, L., Renou, J.P., Robaglia, C., and Meyer, C. (2012). Mutations in the Arabidopsis homolog of LST8/GbetaL, a partner of the target of Rapamycin kinase, impair plant growth, flowering, and metabolic adaptation to long days. Plant Cell 24, 463-481.

Naseer, S., Lee, Y., Lapierre, C., Franke, R., Nawrath, C., and Geldner, N. (2012). Casparian strip diffusion barrier in Arabidopsis is made of a lignin polymer without suberin. Proceedings of the National Academy of Sciences of the United States of America 109, 10101-10106.

Nicolas, S.D., Monod, H., Eber, F., Chevre, A.M., and Jenczewski, E. (2012). Non-random distribution of extensive chromosome rearrangements in Brassica napus depends on genome organization. Plant J 70, 691-703.

Pacurar, D.I., Pacurar, M.L., Street, N., Bussell, J.D., Pop, T.I., Gutierrez, L., and Bellini, C. (2012). A collection of INDEL markers for map-based cloning in seven Arabidopsis accessions. Journal of Experimental Botany 63, 2491-2501.

Parent JS, Martínez de Alba AE, Vaucheret H. The origin and effect of small RNA signaling in plants. Front Plant Sci. 2012;3:179. Epub 2012 Aug 9.

Peaucelle, A., Braybrook, S., and Hofte, H. (2012). Cell wall mechanics and growth control in plants: the role of pectins revisited. Front Plant Sci 3, 121.

Pineau C., Loubet S., Lefoulon C., Chalies C., Fizames C., Lacombe B., Ferrand M., Loudet O., Berthomieu P., Richard O. (2012)  Natural variation at the FRD3 MATE transporter locus reveals cross-talk between Fe homeostasis and Zn tolerance in Arabidopsis thaliana. PLoS Genetics  8(12): e1003120

Pochon S, Terrasson E, Guillemette T, Iacomi-Vasilescu B, Georgeault S, Juchaux M, Berruyer R, Debeaujon I, Simoneau P, Campion C (2012) The Arabidopsis thaliana - Alternaria brassicicola pathosystem: a model interaction for investigating seed transmission of necrotrophic fungi. Plant Methods 8, 16

Poormohammad Kiani, S., Trontin, C., Andreatta, M., Simon, M., Robert, T., Salt, D.E., and Loudet, O. (2012). Allelic heterogeneity and trade-off shape natural variation for response to soil micronutrient. PLoS genetics 8, e1002814.

Pribat, A., Sormani, R., Rousseau-Gueutin, M., Julkowska, M.M., Testerink, C., Joubes, J., Castroviejo, M., Laguerre, M., Meyer, C., Germain, V., and Rothan, C. (2012). A novel class of PTEN protein in Arabidopsis displays unusual phosphoinositide phosphatase activity and efficiently binds phosphatidic acid. Biochemical Journal 441, 161-171.

Rajjou, L., Duval, M., Gallardo, K., Catusse, J., Bally, J., Job, C., and Job, D. (2012). Seed Germination and Vigor. Annual Review of Plant Biology 63.

Richet, N., Afif, D., Tozo, K., Pollet, B., Maillard, P., Huber, F., Priault, P., Banvoy, J., Gross, P., Dizengremel, P., Lapierre, C., Perre, P., and Cabane, M. (2012). Elevated CO2 and/or ozone modify lignification in the wood of poplars (Populus tremula x alba). Journal of experimental botany 63, 4291-4301.

Richet, N., Tozo, K., Afif, D., Banvoy, J., Legay, S., Dizengremel, P., and Cabane, M. (2012). The response to daylight or continuous ozone of phenylpropanoid and lignin biosynthesis pathways in poplar differs between leaves and wood. Planta 236, 727-737.

Robaglia, C., Thomas, M., and Meyer, C. (2012). Sensing nutrient and energy status by SnRK1 and TOR kinases. Current opinion in plant biology 15, 301-307.

Romano, J.M., Dubos, C., Prouse, M.B., Wilkins, O., Hong, H., Poole, M., Kang, K.Y., Li, E., Douglas, C.J., Western, T.L., Mansfield, S.D., and Campbell, M.M. (2012). AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network. The New phytologist 195, 774-786.

Routaboul, J.M., Dubos, C., Beck, G., Marquis, C., Bidzinski, P., Loudet, O., and Lepiniec, L. (2012). Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis. J Exp Bot.

Rubio-Diaz, S., Perez-Perez, J.M., Gonzalez-Bayon, R., Munoz-Viana, R., Borrega, N., Mouille, G., Hernandez-Romero, D., Robles, P., Hofte, H., Ponce, M.R., and Micol, J.L. (2012). Cell Expansion-Mediated Organ Growth Is Affected by Mutations in Three EXIGUA Genes. PloS one 7.

Sibout, R., and Hofte, H. (2012). Plant cell biology: the ABC of monolignol transport. Current biology : CB 22, R533-535.

Simon, M., Simon, A., Martins, F., Botran, L., Tisne, S., Granier, F., Loudet, O., and Camilleri, C. (2012). DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions. Plant J 69, 1094-1101.

Snegaroff, J., Bouchez, I., Smaali, M.E., Pecquet, C., Raison-Peyron, N., Jolivet, P., and Lauriere, M. (2012). Barley gamma3-hordein: Glycosylation at an atypical site, disulfide bridge analysis, and reactivity with IgE from patients allergic to wheat. Biochimica et biophysica acta.

Thévenin, J., Dubos, C., Xu, W., Le Gourrierec, J., Kelemen, Z., Charlot, F., Nogue, F., Lepiniec, L., and Dubreucq, B. (2012). A new system for fast and quantitative analysis of heterologous gene expression in plants. New Phytol 193, 504-512.

To A, Joube J, Barthole G, Lécureuil A, Scagnelli A, Jasinski S, Lepiniec L, Baud S (2012) WRINKLED transcription factors orchestrate tissue-specific regulation of fatty acid biosynthesis in Arabidopsis. Plant Cell 24, 5007-5023

Truernit, E., Bauby, H., Belcram, K., Barthelemy, J., and Palauqui, J.C. (2012). OCTOPUS, a polarly localised membrane-associated protein, regulates phloem differentiation entry in Arabidopsis thaliana. Development 139, 1306-1315.

Uyttewaal, M., Burian, A., Alim, K., Landrein, B.T., Borowska-Wykret, D., Dedieu, A., Peaucelle, A., Ludynia, M., Traas, J., Boudaoud, A., Kwiatkowska, D., and Hamant, O. (2012). Mechanical Stress Acts via Katanin to Amplify Differences in Growth Rate between Adjacent Cells in Arabidopsis. Cell 149, 439-451.

Vaucheret, H., and Chupeau, Y. (2012). Ingested plant miRNAs regulate gene expression in animals. Cell Res 22, 3-5.

Vetter MM, Kronholm I, He F, Häweker H, Reymond M, Bergelson J, Robatzek S, de Meaux J. 2012 Flagellin perception varies quantitatively in Arabidopsis thaliana and its relatives. Mol Biol Evol. 29 1655-67

Vivancos, J., Spinner, L., Mazubert, C., Charlot, F., Paquet, N., Thareau, V., Dron, M., Nogue, F., and Charon, C. (2012). The function of the RNA-binding protein TEL1 in moss reveals ancient regulatory mechanisms of shoot development. Plant Molecular Biology 78, 323-336.

Wolf, S., and Greiner, S. (2012). Growth control by cell wall pectins. Protoplasma 249 Suppl 2, S169-175.

Wolf, S., Hematy, K., and Hofte, H. (2012). Growth control and cell wall signaling in plants. Annu Rev Plant Biol 63, 381-407.

Wolf, S., Mravec, J., Greiner, S., Mouille, G., and Hofte, H. (2012). Plant Cell Wall Homeostasis Is Mediated by Brassinosteroid Feedback Signaling. Current biology : CB.

Yoshimoto, K. (2012). Beginning to understand autophagy, an intracellular self-degradation system in plants. Plant Cell Physiol 53, 1355-1365.

Yelina NE, Choi K, Chelysheva L, Macaulay M, De Snoo B, Wijnker E, Miller N, Drouaud J, Grelon M, Copenhaver GP, et al (2012) Epigenetic remodeling of meiotic crossover frequency in Arabidopsis thaliana DNA methyltransferase mutants. PLoS genetics 8: e1002844

Zaffalon, V., Mukherjee, S.K., Reddy, V.S., Thompson, J.R., and Tepfer, M. (2012). A survey of geminiviruses and associated satellite DNAs in the cotton-growing areas of northwestern India. Archives of Virology 157, 483-495.

Zerjal, T., Rousselet, A., Mhiri, C., Combes, V., Madur, D., Grandbastien, M.A., Charcosset, A., and Tenaillon, M.I. (2012). Maize genetic diversity and association mapping using transposable element insertion polymorphisms. Theoretical and Applied Genetics 124, 1521-1537.

 

2011

Adam, H., Marguerettaz, M., Qadri, R., Adroher, B., Richaud, F., Collin, M., Thuillet, A.C., Vigouroux, Y., Laufs, P., Tregear, J.W., and Jouannic, S. (2011). Divergent Expression Patterns of miR164 and CUP-SHAPED COTYLEDON Genes in Palms and Other Monocots: Implication for the Evolution of Meristem Function in Angiosperms. Molecular Biology and Evolution 28, 1439-1454.

Agrawal, G.K., Bourguignon, J., Rolland, N., Ephritikhine, G., Ferro, M., Jaquinod, M., Alexiou, K.G., Chardot, T., Chakraborty, N., Jolivet, P., Doonan, J.H., and Rakwal, R. (2011). Plant organelle proteomics: Collaborating for optimal cell function. Mass Spectrometry Reviews 30, 772-853

Alcazar, R., Reymond, M., Schmitz, G., and de Meaux, J. (2011). Genetic and evolutionary perspectives on the interplay between plant immunity and development. Current Opinion in Plant Biology 14, 378-384.

Allais, F., Lancelot, A., Pion, F., Mazeau, K., Méry, S., and Ducrot, P. (2011). Synthesis, molecular modeling and characterization of new polyphenolic dendronized polymers via ROMP. Polymer Preprints 52, 379.

Allais, F., Pla, T.J.L., and Ducrot, P.-H. (2011). An Access to Chiral ß-Benzyl-?-butyrolactones and Its Application to the Synthesis of Enantiopure (+)-Secoisolariciresinol, (-)-Secoisolariciresinol, and (-)-Enterolactone. Synthesis-Stuttgart, 1456-1464.

Arc, E., Galland, M., Cueff, G., Godin, B., Lounifi, I., Job, D., and Rajjou, L. (2011). Reboot the system thanks to protein post-translational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment. Proteomics 11, 1606-1618.

Arc E, Ogé L, Grappin P, Rajjou L (2011) Plant Seed: A Relevant Model to Study Aging Processes. in "The Field of Biological Aging: Past, Present and Future", Research Signpost, Olgun A Ed, pp 87-102

Arraouadi, S., Chardon, F., Huguet, T., Aouani, M.E., and Badri, M. (2011). QTLs mapping of morphological traits related to salt tolerance in Medicago truncatula. Acta Physiologiae Plantarum 33, 917-926.

Aubert, A., Marion, J., Boulogne, C., Bourge, M., Abreu, S., Bellec, Y., Faure, J.D., and Satiat-Jeunemaitre, B. (2011). Sphingolipids involvement in plant endomembrane differentiation: the BY2 case. Plant J 65, 958-971.

Bach, L., Gissot, L., Marion, J., Tellier, F., Moreau, P., Satiat-Jeunemaitre, B., Palauqui, J.C., Napier, J.A., and Faure, J.D. (2011). Very-long-chain fatty acids are required for cell plate formation during cytokinesis in Arabidopsis thaliana. J Cell Sci 124, 3223-3234.

Badri, M., Chardon, F., Huguet, T., and Aouani, M.E. (2011). Quantitative trait loci associated with drought tolerance in the model legume Medicago truncatula. Euphytica 181, 415-428.

Berger, N., Dubreucq, B., Roudier, F., Dubos, C., and Lepiniec, L. (2011). Transcriptional Regulation of Arabidopsis LEAFY COTYLEDON2 Involves RLE, a cis-Element That Regulates Trimethylation of Histone H3 at Lysine-27. The Plant cell 23, 4065-4078.

Berthet, S., Demont-Caulet, N., Pollet, B., Bidzinski, P., Cezard, L., Le Bris, P., Borrega, N., Herve, J., Blondet, E., Balzergue, S., Lapierre, C., and Jouanin, L. (2011). Disruption of LACCASE4 and 17 Results in Tissue-Specific Alterations to Lignification of Arabidopsis thaliana Stems. Plant Cell 23, 1124-1137.

Bilsborough, G.D., Runions, A., Barkoulas, M., Jenkins, H.W., Hasson, A., Galinha, C., Laufs, P., Hay, A., Prusinkiewicz, P., and Tsiantis, M. (2011). Model for the regulation of Arabidopsis thaliana leaf margin development. Proc Natl Acad Sci U S A 108, 3424-3429.

Bischoff, V., Desprez, T., Mouille, G., Vernhettes, S., Gonneau, M., and Hofte, H. (2011). Phytochrome regulation of cellulose synthesis in Arabidopsis. Current biology : CB 21, 1822-1827.

Bouxin, F., Baumberger, S., Renault, J.H., and Dole, P. (2011). Study of a specific lignin model: gamma-oxidation and how it influences the hydrolysis efficiency of alcohol-aldehyde dehydrogenation copolymers. Bioresour Technol 102, 5567-5573.

Boyer, F., Rameau, C., Pillot, J., De Saint-Germain, A., and Pouvreau, J. (2011). Nouveaux analogues de strigolactones spécifiquement actif sur le contrôle de la ramification des plantes agissant faiblement sur la germination des plantes parasites de type Orobanche, I. DIRV-11-0027, ed.

Brkljacic, J., Grotewold, E., Scholl, R., Mockler, T., Garvin, D.F., Vain, P., Brutnell, T., Sibout, R., Bevan, M., Budak, H., Caicedo, A.L., Gao, C.X., Gu, Y., Hazen, S.P., Holt, B.F., Hong, S.Y., Jordan, M., Manzaneda, A.J., Mitchell-Olds, T., Mochida, K., Mur, L.A.J., Park, C.M., Sedbrook, J., Watt, M., Zheng, S.J., and Vogel, J.P. (2011). Brachypodium as a Model for the Grasses: Today and the Future. Plant Physiology 157, 3-13.

Budar, F., and Roux, F. (2011). The role of organelle genomes in plant adaptation: time to get to work! Plant Signal Behav 6, 635-639.

Canas, R.A., Amiour, N., Quillere, I., and Hirel, B. (2011). An integrated statistical analysis of the genetic variability of nitrogen metabolism in the ear of three maize inbred lines (Zea mays L.). Journal of experimental botany 62, 2309-2318.

Caranta, C., Aranda, M., Tepfer, M., and Lopez-Moya, J. (2011). Recent advances in plant virology. (Norfolk, UK: Caister Academic Press).

Castaings, L., Marchive, C., Meyer, C., and Krapp, A. (2011). Nitrogen signalling in Arabidopsis: how to obtain insights into a complex signalling network. J Exp Bot 62, 1391-1397.

Chan, J., Eder, M., Crowell, E.F., Hampson, J., Calder, G., and Lloyd, C. (2011). Microtubules and CESA tracks at the inner epidermal wall align independently of those on the outer wall of light-grown Arabidopsis hypocotyls. Journal of Cell Science 124, 1088-1094.

Chen, S., Nelson, M.N., Chv®vre, A.-M., Jenczewski, E., Li, Z., Mason, A.S., Meng, J., Plummer, J.A., Pradhan, A., Siddique, K.H.M., Snowdon, R.J., Yan, G., Zhou, W., and Cowling, W.A. (2011). Trigenomic Bridges for Brassica Improvement. Critical Reviews in Plant Sciences 30, 524-547.

Cottyn, B., Kollmann, A., Waffo-Teguo, P., and Ducrot, P.H. (2011). Rationalization and in vitro modeling of the chemical mechanisms of the enzymatic oxidation of phenolic compounds in planta: from flavonols and stilbenoids to lignins. Chemistry 17, 7282-7287.

Crowell, E.F., Timpano, H., Desprez, T., Franssen-Verheijen, T., Emons, A.M., Hofte, H., and Vernhettes, S. (2011). Differential regulation of cellulose orientation at the inner and outer face of epidermal cells in the Arabidopsis hypocotyl. Plant Cell 23, 2592-2605.

Culhaoglu, T., Zheng, D., Mechin, V., and Baumberger, S. (2011). Adaptation of the Carrez procedure for the purification of ferulic and p-coumaric acids released from lignocellulosic biomass prior to LC/MS analysis. Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 879, 3017-3022.

Dechorgnat, J., Nguyen, C.T., Armengaud, P., Jossier, M., Diatloff, E., Filleur, S., and Daniel-Vedele, F. (2011). From the soil to the seeds: the long journey of nitrate in plants. J Exp Bot 62, 1349-1359.

Dobrenel, T., Marchive, C., Sormani, R., Moreau, M., Mozzo, M., Montane, M.H., Menand, B., Robaglia, C., and Meyer, C. (2011). Regulation of plant growth and metabolism by the TOR kinase. Biochem Soc Trans 39, 477-481.

Drouaud, J., and Mezard, C. (2011). Characterization of meiotic crossovers in pollen from Arabidopsis thaliana. Methods Mol Biol 745, 223-249.

Duroc, Y., Bouchez, D., and Pastuglia, M. (2011). The preprophase band and division site determination in land plants. In The Plant Cytoskeleton, B. Liu, ed (New York: Springer USA), pp. 145-186.

Feraru, E., Feraru, M.I., Kleine-Vehn, J., Martiniere, A., Mouille, G., Vanneste, S., Vernhettes, S., Runions, J., and Friml, J. (2011). PIN Polarity Maintenance by the Cell Wall in Arabidopsis. Current Biology 21, 338-343.

Frey, A., Effroy, D., Lefebvre, V., Seo, M., Perreau, F., Berger, A., Sechet, J., To, A., North, H.M., and Marion-Poll, A. (2011). Epoxycarotenoid cleavage by NCED5 fine-tunes ABA accumulation and affects seed dormancy and drought tolerance with other NCED family members. Plant J.

Gery, C., Zuther, E., Schulz, E., Legoupi, J., Chauveau, A., McKhann, H., Hincha, D.K., and Téoulé, E. (2011). Natural variation in the freezing tolerance of Arabidopsis thaliana: Effects of RNAi-induced CBF depletion and QTL localisation vary among accessions. Plant Science 180, 12-23.

Giraut, L., Falque, M., Drouaud, J., Pereira, L., Martin, O.C., and Mezard, C. (2011). Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes. PLoS genetics 7, e1002354.

Gohon, Y., Vindigni, J.D., Pallier, A., Wien, F., Celia, H., Giuliani, A., Tribet, C., Chardot, T., and Briozzo, P. (2011). High water solubility and fold in amphipols of proteins with large hydrophobic regions: Oleosins and caleosin from seed lipid bodies. Biochim Biophys Acta 1808, 706-716.

Grappin, P., Collet, B., Yang, H., Jallet, D., Oge, L., and Zubarev, R. (2011). New proteomic developments to analyze protein isomerization and their biological significance in plants. J Proteomics 74, 1475-1482.

Guenin, S., Mareck, A., Rayon, C., Lamour, R., Ndong, Y.A., Domon, J.M., Senechal, F., Fournet, F., Jamet, E., Canut, H., Percoco, G., Mouille, G., Rolland, A., Rusterucci, C., Guerineau, F., Van Wuytswinkel, O., Gillet, F., Driouich, A., Lerouge, P., Gutierrez, L., and Pelloux, J. (2011). Identification of pectin methylesterase 3 as a basic pectin methylesterase isoform involved in adventitious rooting in Arabidopsis thaliana. New Phytologist 192, 114-126.

Guillon, F., Larre, C., Petipas, F., Berger, A., Moussawi, J., Rogniaux, H., Santoni, A., Saulnier, L., Jamme, F., Miquel, M., Lepiniec, L., and Dubreucq, B. (2011). A comprehensive overview of grain development in Brachypodium distachyon variety Bd21. Journal of Experimental Botany in press.

Hasson, A., Plessis, A., Blein, T., Adroher, B., Grigg, S., Tsiantis, M., Boudaoud, A., Damerval, C., and Laufs, P. (2011). Evolution and Diverse Roles of the CUP-SHAPED COTYLEDON Genes in Arabidopsis Leaf Development. Plant Cell 23, 54-68.

Heidari, B., Matre, P., Nemie-Feyissa, D., Meyer, C., Rognli, O.A., Moller, S.G., and Lillo, C. (2011). Protein Phosphatase 2A B55 and A Regulatory Subunits Interact with Nitrate Reductase and Are Essential for Nitrate Reductase Activation. Plant Physiol 156, 165-172.

Heiss-Blanquet, S., Zheng, D., Ferreira, N.L., Lapierre, C., and Baumberger, S. (2011). Effect of pretreatment and enzymatic hydrolysis of wheat straw on cell wall composition, hydrophobicity and cellulase adsorption. Bioresource Technology 102, 5938-5946.

Hirsch, J., Misson, J., Crisp, P.A., David, P., Bayle, V., Estavillo, G.M., Javot, H., Chiarenza, S., Mallory, A.C., Maizel, A., Declerck, M., Pogson, B.J., Vaucheret, H., Crespi, M., Desnos, T., Thibaud, M.C., Nussaume, L., and Marin, E. (2011). A novel fry1 allele reveals the existence of a mutant phenotype unrelated to 5'->3' exoribonuclease (XRN) activities in Arabidopsis thaliana roots. PLoS One 6, e16724.

Jauvion, V., Mallory, A., and Vaucheret, H. (2011). Deciphering post-transcriptional gene silencing pathways through genetic screens. . In RNAi technology, R.K. Gaur, Y. Gafni, P. Sharma, and V.K. Gupta, eds (CRC press. Science publishers), pp. 17-46.

Jenczewski, E., Mercier, R., Macaisne, N., and Mézard, C. (2011). Meiosis: recombination and the control of cell division. In Diversity of genomes in plants. (Springer-Verlag).

Job, D., Pelletier, G., and Pernollet, J.C. (2011). On the trail of domestications, migrations and invasions in agriculture Foreword. Comptes Rendus Biologies 334, 169-170.

Jolivet, P., Boulard, C., Bellamy, A., Valot, B., d'Andrea, S., Zivy, M., Nesi, N., and Chardot, T. (2011). Oil body proteins sequentially accumulate throughout seed development in Brassica napus. J Plant Physiol 168, 2015-2020.

Kamisugi, Y., Schaefer, D.G., Kozak, J., Charlot, F., Vrielynck, N., Hola, M., Angelis, K.J., Cuming, A.C., and Nogue, F. (2011). MRE11 and RAD50, but not NBS1, are essential for gene targeting in the moss Physcomitrella patens. Nucleic Acids Res.

Kopecny, D., Tylichova, M., Snegaroff, J., Popelkova, H., and Sebela, M. (2011). Carboxylate and aromatic active-site residues are determinants of high-affinity binding of omega-aminoaldehydes to plant aminoaldehyde dehydrogenases. Febs Journal 278, 3130-3139.

Krapp, A., Berthome, R., Orsel, M., Mercey-Boutet, S., Yu, A., Castaings, L., Elftieh, S., Major, H., Renou, J.P., and Daniel-Vedele, F. (2011). Arabidopsis roots and shoots show distinct temporal adaptation patterns toward nitrogen starvation. Plant physiology 157, 1255-1282.

Latrasse, D., Germann, S., Houba-Herin, N., Dubois, E., Bui-Prodhomme, D., Hourcade, D., Juul-Jensen, T., Le Roux, C., Majira, A., Simoncello, N., Granier, F., Taconnat, L., Renou, J.P., and Gaudin, V. (2011). Control of Flowering and Cell Fate by LIF2, an RNA Binding Partner of the Polycomb Complex Component LHP1. Plos One 6, 17.

Lebrun, J.D., Demont-Caulet, N., Cheviron, N., Laval, K., Trinsoutrot-Gattin, I., and Mougin, C. (2011). Secretion profiles of fungi as potential tools for metal ecotoxicity assessment: a study of enzymatic system in Trametes versicolor. Chemosphere 82, 340-345.

Lefebvre, V., Fortabat, M.N., Ducamp, A., North, H.M., Maia-Grondard, A., Trouverie, J., Boursiac, Y., Mouille, G., and Durand-Tardif, M. (2011). ESKIMO1 Disruption in Arabidopsis Alters Vascular Tissue and Impairs Water Transport. Plos One 6, 13.

Libeau, P., Durandet, M., Granier, F., Marquis, C., Berthomé, R., Renou, J., Taconnat-Soubirou, L., and Horlow, C. (2011). Gene expression profiling of Arabidopsis meiocytes. Plant Biol (Stuttg) 13, 784-793.

Llorens, C., Futami, R., Covelli, L., Dominguez-Escriba, L., Viu, J.M., Tamarit, D., Aguilar-Rodriguez, J., Vicente-Ripolles, M., Fuster, G., Bernet, G.P., Maumus, F., Munoz-Pomer, A., Sempere, J.M., Latorre, A., and Moya, A. (2011). The Gypsy Database (GyDB) of mobile genetic elements: release 2.0. Nucleic Acids Research 39, D70-D74.

Lothier, J., Gaufichon, L., Sormani, R., Lemaitre, T., Azzopardi, M., Morin, H., Chardon, F., Reisdorf-Cren, M., Avice, J.C., and Masclaux-Daubresse, C. (2011). The cytosolic glutamine synthetase GLN1;2 plays a role in the control of plant growth and ammonium homeostasis in Arabidopsis rosettes when nitrate supply is not limiting. J Exp Bot 62, 1375-1390.

Maaroufi-Dguimi, H., Debouba, M., Gaufichon, L., Clement, G., Gouia, H., Hajjaji, A., and Suzuki, A. (2011). An Arabidopsis mutant disrupted in ASN2 encoding asparagine synthetase 2 exhibits low salt stress tolerance. Plant Physiology and Biochemistry 49, 623-628.

Macaisne, N., Vignard, J., and Mercier, R. (2011). SHOC1 and PTD form an XPF-ERCC1-like complex that is required for formation of class I crossovers. J Cell Sci 124, 2687-2691.

Marimuthu, M.P., Jolivet, S., Ravi, M., Pereira, L., Davda, J.N., Cromer, L., Wang, L., Nogue, F., Chan, S.W., Siddiqi, I., and Mercier, R. (2011). Synthetic clonal reproduction through seeds. Science 331, 876.

Markham, J.E., Molino, D., Gissot, L., Bellec, Y., Hematy, K., Marion, J., Belcram, K., Palauqui, J.C., Satiat-JeuneMaitre, B., and Faure, J.D. (2011). Sphingolipids Containing Very-Long-Chain Fatty Acids Define a Secretory Pathway for Specific Polar Plasma Membrane Protein Targeting in Arabidopsis. Plant Cell 23, 2362-2378.

Martínez de Alba AE, Jauvion V, Mallory AC, Bouteiller N, Vaucheret H. The miRNA pathway limits AGO1 availability during siRNA-mediated PTGS defense against exogenous RNA. Nucleic Acids Res. 2011 Nov;39(21):9339-44.

Masclaux-Daubresse C, Chardon F. (2011). Exploring nitrogen remobilization for seed filling using natural variation in Arabidopsis thaliana. Journal of Experimental Botany 62(6): 2131-2142.

Matiolli, C.C., Tomaz, J.P., Duarte, G.T., Prado, F.M., Del Bem, L.E., Silveira, A.B., Gauer, L., Corrv™a, L.G., Drumond, R.D., Viana, A.J., Di Mascio, P., Meyer, C., and Vincentz, M. (2011). The Arabidopsis bZIP Gene AtbZIP63 Is a Sensitive Integrator of Transient Abscisic Acid and Glucose Signals. Plant physiology 157, 692-705.

Maunoury, N., and Vaucheret, H. (2011). AGO1 and AGO2 Act Redundantly in miR408-Mediated Plantacyanin Regulation. PloS one 6, e28729.

Méchin, V., Riboule, t.C., Guillaumie, S., and Barrière, Y. (2011). Investigating maize cell wall traits for improvement of silage and biofuel production in Europe. In Advances in maize, J. Prioul, ed

Melser, S., Molino, D., Batailler, B., Peypelut, M., Laloi, M., Wattelet-Boyer, V., Bellec, Y., Faure, J.D., and Moreau, P. (2011). Links between lipid homeostasis, organelle morphodynamics and protein trafficking in eukaryotic and plant secretory pathways. Plant Cell Rep 30, 177-193.

Miquel, M., Nesi, N., Paris, N., Larre, C., Quinsac, A., Savoire, R., Lanoiselle, J.-L., Jolivet, P., and Chardot , T. (2011). A continuum of research projects to improve extraction of oil and proteins in oilseed plants. Oléagineux Corps gras Lipides 18, 168-172.

Mravec, J., Petrasek, J., Li, N., Boeren, S., Karlova, R., Kitakura, S., Parezova, M., Naramoto, S., Nodzynski, T., Dhonukshe, P., Bednarek, S.Y., Zazimalova, E., de Vries, S., and Friml, J. (2011). Cell Plate Restricted Association of DRP1A and PIN Proteins Is Required for Cell Polarity Establishment in Arabidopsis. Current Biology 21, 1055-1060.

Päcurar, D.I., Thordal-Christensen, H., Päcurar, M.L., Pamfil, D., Botez, C., and Bellini, C. (2011). Agrobacterium tumefaciens: From crown gall tumors to genetic transformation. Physiological and Molecular Plant Pathology 76, 76-81.

Palauqui, J.C., and Laufs, P. (2011). Phyllotaxis: in search of the golden angle. Curr Biol 21, R502-504.

Parisod, C., A, S., Ainouche, M., and Grandbastien, M. (2011). Detecting epigenetic effects of transposable elements in plants. In Epigenetic phenomena in plants: understanding and analysis (Springer), pp. in press.

Peaucelle, A., Braybrook, S.A., Le Guillou, L., Bron, E., Kuhlemeier, C., and Hofte, H. (2011). Pectin-Induced Changes in Cell Wall Mechanics Underlie Organ Initiation in Arabidopsis. Curr Biol 21, 1720-1726.

Peaucelle, A., Louvet, R., Johansen, J.N., Salsac, F., Morin, H., Fournet, F., Belcram, K., Gillet, F., Hofte, H., Laufs, P., Mouille, G., and Pelloux, J. (2011). The transcription factor BELLRINGER modulates phyllotaxis by regulating the expression of a pectin methylesterase in Arabidopsis. Development 138, 4733-4741.

Pelissier, T., Clavel, M., Chaparro, C., Pouch-Pelissier, M.N., Vaucheret, H., and Deragon, J.M. (2011). Double-stranded RNA binding proteins DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels in Arabidopsis. RNA 17, 1502-1510.

Planchet, E., Rannou, O., Ricoult, C., Boutet-Mercey, S., Maia-Grondard, A., and Limami, A.M. (2011). Nitrogen metabolism responses to water deficit act through both abscisic acid (ABA)-dependent and independent pathways in Medicago truncatula during post-germination. Journal of Experimental Botany 62, 605-615.

Plessis, A., Cournol, R., Effroy, D., Perez, V.S., Botran, L., Kraepiel, Y., Frey, A., Sotta, B., Cornic, G., Leung, J., Giraudat, J., Marion-Poll, A., and North, H.M. (2011). New ABA-Hypersensitive Arabidopsis Mutants Are Affected in Loci Mediating Responses to Water Deficit and Dickeya dadantii Infection. Plos One 6, 13.

Pop, T.I., Pamfil, D., and Bellini, C. (2011). Auxin Control in the Formation of Adventitious Roots. Notulae Botanicae Horti Agrobotanici Cluj-Napoca 39, 307-316.

Popluechai, S., Froissard, M., Jolivet, P., Breviario, D., Gatehouse, A.M., O'Donnell, A.G., Chardot, T., and Kohli, A. (2011). Jatropha curcas oil body proteome and oleosins: L-form JcOle3 as a potential phylogenetic marker. Plant Physiol Biochem 49, 352-356.

Pouteau, S., and Albertini, C. (2011). An assessment of morphogenetic fluctuation during reproductive phase change in Arabidopsis. Ann Bot 107, 1017-1027.

Pouvreau, B., Baud, S., Vernoud, V., Morin, V., Py, C., Gendrot, G., Pichon, J.P., Rouster, J., Paul, W., and Rogowsky, P.M. (2011). Duplicate maize wrinkled1 transcription factors activate target genes involved in seed oil biosynthesis. Plant Physiol 156, 674-686.

Prioul, J., Damerval, C., Manicacci, D., and Méchin, V. (2011). Proteomics in identifying new regulatory mechanisms involved in seed development and ultimately seed quality. In Seed Development: OMICS Technologies toward Improvement of Seed Quality and Crop Yield, A.G.a.R. R, ed (Springer (The Netherlands).

Proust, H., Hoffmann, B., Xie, X., Yoneyama, K., Schaefer, D.G., Nogue, F., and Rameau, C. (2011). Strigolactones regulate protonema branching and act as a quorum sensing-like signal in the moss Physcomitrella patens. Development 138, 1531-1539.

Ragni, L., Nieminen, K., Pacheco-Villalobos, D., Sibout, R., Schwechheimer, C., and Hardtke, C.S. (2011). Mobile Gibberellin Directly Stimulates Arabidopsis Hypocotyl Xylem Expansion. Plant Cell 23, 1322-1336.

Rajjou L, Belghazi M, Catusse J, Ogé L, Arc E, Godin B, Chibani K, Ali-Rachidi S, Collet B, Grappin P, Jullien M, Gallardo K, Job C, Job D (2011) Proteomics and posttranslational proteomics of seed dormancy and germination. Methods Mol Biol 773, 215-36

Renny-Byfield, S., Chester, M., Kovarik, A., Le Comber, S.C., Grandbastien, M.A., Deloger, M., Nichols, R.A., Macas, J., Novak, P., Chase, M.W., and Leitch, A.R. (2011). Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived Repetitive DNAs. Molecular Biology and Evolution 28, 2843-2854.

Richet, N., Afif, D., Huber, F.o., Pollet, B., Banvoy, J., El Zein, R., Lapierre, C., Dizengremel, P., Perré, P., and Cabané, M. (2011). Cellulose and lignin biosynthesis is altered by ozone in wood of hybrid poplar (Populus tremula—alba). Journal of Experimental Botany 62, 3575-3586.

Roux, F., Colome-Tatche, M., Edelist, C., Wardenaar, R., Guerche, P., Hospital, F., Colot, V., Jansen, R.C., and Johannes, F. (2011). Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature. Genetics 188, 1015-1017.

Shi, C.L., Stenvik, G.E., Vie, A.K., Bones, A.M., Pautot, V., Proveniers, M., Aalen, R.B., and Butenko, M.A. (2011). Arabidopsis Class I KNOTTED-Like Homeobox Proteins Act Downstream in the IDA-HAE/HSL2 Floral Abscission Signaling Pathway. Plant Cell 23, 2553-2567.

Simon, M., Simon, A., Martins, F., Botran, L., Tisne, S., Granier, F., Loudet, O., and Camilleri, C. (2011). DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions. Plant J in press.

Sormani, R., Masclaux-Daubresse, C., Daniel-Vedele, F., and Chardon, F. (2011). Transcriptional Regulation of Ribosome Components Are Determined by Stress According to Cellular Compartments in Arabidopsis thaliana. PLoS ONE 6, e28070.

Sullivan, S., Ralet, M.C., Berger, A., Diatloff, E., Bischoff, V., Gonneau, M., Marion-Poll, A., and North, H.M. (2011). CESA5 is required for the synthesis of cellulose with a role in structuring the adherent mucilage of Arabidopsis seeds. Plant Physiol 156, 1725-1739.

Szadkowski, E., Eber, F., Huteau, V., Lode, M., Coriton, O., Jenczewski, E., and Chevre, A.M. (2011). Polyploid formation pathways have an impact on genetic rearrangements in resynthesized Brassica napus. New Phytologist 191, 884-894.

Tamasloukht, B., Lam, M., Martinez, Y., Tozo, K., Barbier, O., Jourda, C., Jauneau, A., Borderies, G., Balzergue, S., Renou, J.P., Huguet, S., Martinant, J.P., Tatout, C., Lapierre, C., Barriere, Y., Goffner, D., and Pichon, M. (2011). Characterization of a cinnamoyl-CoA reductase 1 (CCR1) mutant in maize: effects on lignification, fibre development, and global gene expression. Journal of Experimental Botany 62, 3837-3848.

Thévenin, J., Pollet, B., Letarnec, B., Saulnier, L., Gissot, L., Maia-Grondard, A., Lapierre, C., and Jouanin, L. (2011). The Simultaneous Repression of CCR and CAD, Two Enzymes of the Lignin Biosynthetic Pathway, Results in Sterility and Dwarfism in Arabidopsis thaliana. Mol Plant 4, 70-82.

Timpano, H.T., Bischoff, V., Desprez, T., Hofte, H., Gonneau, M., and Vernhettes, S. (2011). Dynamics and regulation of cellulose synthase machinery. Abstracts of Papers of the American Chemical Society 241.

Trontin, C., Tisne, S., Bach, L., and Loudet, O. (2011). What does Arabidopsis natural variation teach us (and does not teach us) about adaptation in plants? Curr Opin Plant Biol 14, 225-231.

Vaucheret, H. (2011). 2001, an odyssey of small RNAs. Biofutur 30, 32-34.

Vaucheret, H., and Chupeau, Y. (2011). Ingested plant miRNAs regulate gene expression in animals. Cell Research. doi:10.1038/cr.2011.

Vermachova, M., Purkrtova, Z., Santrucek, J., Jolivet, P., Chardot, T., and Kodicek, M. (2011). New protein isoforms identified within Arabidopsis thaliana seed oil bodies combining chymotrypsin/trypsin digestion and peptide fragmentation analysis. Proteomics 11, 3430-3434.

Vivancos, J., Spinner, L., Mazubert, C., Charlot, F., Paquet, N., Thareau, V., Dron, M., Nogue, F., and Charon, C. (2011). The function of the RNA-binding protein TEL1 in moss reveals ancient regulatory mechanisms of shoot development. Plant Mol Biol.

Wang, X.B., Jovel, J., Udomporn, P., Wang, Y., Wu, Q.F., Li, W.X., Gasciolli, V., Vaucheret, H., and Ding, S.W. (2011). The 21-Nucleotide, but Not 22-Nucleotide, Viral Secondary Small Interfering RNAs Direct Potent Antiviral Defense by Two Cooperative Argonautes in Arabidopsis thaliana. Plant Cell 23, 1625-1638.

Wilson, A., Punginelli, C., Couturier, M., Perreau, F., and Kirilovsky, D. (2011). Essential role of two tyrosines and two tryptophans on the photoprotection activity of the Orange Carotenoid Protein. Biochim Biophys Acta 1807, 293-301.

Zhang, Y., Culhaoglu, T., Pollet, B., Melin, C., Denoue, D., Barriere, Y., Baumberger, S., and Mechin, V. (2011). Impact of Lignin Structure and Cell Wall Reticulation on Maize Cell Wall Degradability. J Agric Food Chem 59, 10129-10135.


2010

Adam, H., Marguerettaz, M., Qadri, R., Adroher, B., Richaud, F., Collin, M., Thuillet, A.-C., Vigouroux, Y., Laufs, P., Treager, J.C., and Jouannic, S. (2010). Divergent expression patterns of miR164 and CUP-SHAPED COTYLEDON genes in palms and other monocots: implication for the evolution of meristem function in angiosperms. Mol Biol Evol in press.
Ainouche, M.L., and Jenczewski, E. (2010). Focus on polyploidy. New Phytol 186, 1-4.

Allais, F., Aouhansou, M., Majira, A., and Ducrot, P.H. (2010). Asymmetric Total Synthesis of Rugulactone, an alpha-Pyrone from Cryptocarya rugulosa. Synthesis-Stuttgart, 2787-2793.

Allais, F., and Ducrot, P.-H. (2010). Stereoselective Total Synthesis of (+)-Dodoneine. Synthesis-Stuttgart, 1649-1653.

Andrey, P., Kieu, K., Kress, C., Lehmann, G., Tirichine, L., Liu, Z., Biot, E., Adenot, P.G., Hue-Beauvais, C., Houba-Herin, N., Duranthon, V., Devinoy, E., Beaujean, N., Gaudin, V., Maurin, Y., and Debey, P. (2010). Statistical analysis of 3D images detects regular spatial distributions of centromeres and chromocenters in animal and plant nuclei. PLoS Comput Biol 6, e1000853.

Auger, B., Marnet, N., Gautier, V., Maia-Grondard, A., Leprince, F., Renard, M., Guyot, S., Nesi, N., and Routaboul, J.M. (2010). A Detailed Survey of Seed Coat Flavonoids in Developing Seeds of Brassica napus L. J Agric Food Chem 58, 6246-6256.

Baarends, W.M., and Mercier, R. (2010). Sisters dancing in meiosis. EMBO Rep 11, 76-78.

Bach, L., and Faure, J.D. (2010). Role of very-long-chain fatty acids in plant development, when chain length does matter. C R Biol 333, 361-370.

Barriere, Y., Mechin, V., Denoue, D., Bauland, C., and Laborde, J. (2010). QTL for Yield, Earliness, and Cell Wall Quality Traits in Topcross Experiments of the F838 x F286 Early Maize RIL Progeny. Crop Science 50, 1761-1772.

Baud, S., Bourrellier, A.B.F., Azzopardi, M., Berger, A., Dechorgnat, J., Daniel-Vedele, F., Lepiniec, L., Miquel, M., Rochat, C., Hodges, M., and Ferrario-Mery, S. (2010). PII is induced by WRINKLED1 and fine-tunes fatty acid composition in seeds of Arabidopsis thaliana. Plant Journal 64, 291-303.

Baud, S., and Lepiniec, L. (2010). Physiological and developmental regulation of seed oil production. Prog Lipid Res 49, 235-249.

Beauclair, L., Yu, A., and Bouche, N. (2010). microRNA-directed cleavage and translational repression of the copper chaperone for superoxide dismutase mRNA in Arabidopsis. Plant J 62, 454-462.

Bencharki, B., Boissinot, S., Revollon, S., Ziegler-Graff, V., Erdinger, M., Wiss, L., Dinant, S., Renard, D., Beuve, M., Lemaitre-Guillier, C., and Brault, V. (2010). Phloem Protein Partners of Cucurbit aphid borne yellows virus: Possible Involvement of Phloem Proteins in Virus Transmission by Aphids. Mol Plant Microbe Interact 23, 799-810.

Beneteau, J., Renard, D., Marche, L., Douville, E., Lavenant, L., Rahbe, Y., Dupont, D., Vilaine, F., and Dinant, S. (2010). Binding Properties of the N-Acetylglucosamine and High-Mannose N-Glycan PP2-A1 Phloem Lectin in Arabidopsis. Plant Physiol 153, 1345-1361.

Beveridge, C., and Rameau, C. (2010). The branching hormone, strigolactone. In Plant Hormones : Biosynthesis, Signal Transduction, Action! (Revised 3rd edition), P. Davies, ed (Springer.

Blein, T., Hasson, A., and Laufs, P. (2010). Leaf development: what it needs to be complex. Curr Opin Plant Biol 13, 75-82.

Bonhomme, S. (2010). Pollen Development And Ubiquitin Proteasome System. In Pollen: Structure, Types and Effects, B.J. Kaiser, ed (Hauppauge, NY, USA: NOVA Publishers.

Bouche, N. (2010). New insights into miR398 functions in Arabidopsis. Plant Signal Behav 5.

Bouchez-Mahiout, I., Boulenc, E., Snv©garoff, J., Choudat, D., Pecquet, C., Raison-Peyron, N., Vigan, M., Chabane, H., Dron-Gonzalves, M., Branlard, G., Tanis-Plant, S., and Lauriere, M. (2010). Immunoblotting analysis of wheat allergens: control of side reactions through wheat polypeptides naturally present in dried cow milk. Food and Agricultural Immunology 21, 237 - 251.

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Wilson, A., Kinney, J.N., Zwart, P.H., Punginelli, C., D'Haene, S., Perreau, F., Klein, M.G., Kirilovsky, D., and Kerfeld, C.A. (2010). Structural Determinants Underlying Photoprotection in the Photoactive Orange Carotenoid Protein of Cyanobacteria. J Biol Chem 285, 18364-18375.

Wingler, A., Purdy, S.J., Edwards, S.A., Chardon, F., and Masclaux-Daubresse, C. (2010). QTL analysis for sugar-regulated leaf senescence supports flowering-dependent and -independent senescence pathways. New Phytol 185, 420-433.

Wuyts, N., Palauqui, J.C., Conejero, G., Verdeil, J.L., Granier, C., and Massonnet, C. (2010). High-contrast three-dimensional imaging of the Arabidopsis leaf enables the analysis of cell dimensions in the epidermis and mesophyll. Plant Methods 6, 17.

Yu, B., Bi, L., Zhai, J., Agarwal, M., Li, S., Wu, Q., Ding, S.W., Meyers, B.C., Vaucheret, H., and Chen, X. (2010). siRNAs compete with miRNAs for methylation by HEN1 in Arabidopsis. Nucleic Acids Res 38, 5844-5850.


2009

Abasolo, W., Eder, M., Yamauchi, K., Obel, N., Reinecke, A., Neumetzler, L., Dunlop, J.W., Mouille, G., Pauly, M., Hofte, H., and Burgert, I. (2009). Pectin may hinder the unfolding of xyloglucan chains during cell deformation: implications of the mechanical performance of Arabidopsis hypocotyls with pectin alterations. Mol Plant 2, 990-999.

Ainouche, M., Fortune, P., Salmon, A., Parisod, C., Grandbastien, M.A., Fukunaga, K., Ricou, M., and Misset, M.T. (2009). Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae). Biological Invasions 11, 1159-1173.

Allais, F., Martinet, S., and Ducrot, P.H. (2009). Straightforward Total Synthesis of 2-O-Feruloyl-L-malate, 2-O-Sinapoyl-L-malate and 2-O-5-Hydroxyferuloyl-L-malate. Synthesis-Stuttgart, 3571-3578.

Assor, C., Placet, V., Chabbert, B., Habrant, A., Lapierre, C., Pollet, B., and Perre, P. (2009). Concomitant Changes in Viscoelastic Properties and Amorphous Polymers during the Hydrothermal Treatment of Hardwood and Softwood. Journal of Agricultural and Food Chemistry 57, 6830-6837.

Atta, R., Laurens, L., Boucheron-Dubuisson, E., Guivarc'h, A., Carnero, E., Giraudat-Pautot, V., Rech, P., and Chriqui, D. (2009). Pluripotency of Arabidopsis xylem pericycle underlies shoot regeneration from root and hypocotyl explants grown in vitro. Plant J 57, 626-644.

Balasubramanian, S., Schwartz, C., Singh, A., Warthmann, N., Kim, M.C., Maloof, J.N., Loudet, O., Trainer, G.T., Dabi, T., Borevitz, J.O., Chory, J., and Weigel, D. (2009). QTL mapping in new Arabidopsis thaliana advanced intercross-recombinant inbred lines. PLoS One 4, e4318.

Barriere, Y., Mechin, V., Riboulet, C., Guillaumie, S., Thomas, J., Bosio, M., Fabre, F., Goffner, D., Pichon, M., Lapierre, C., and Martinant, J.P. (2009). Genetic and genomic approaches for improving biofuel production from maize. Euphytica 170, 183-202.

Baud S, Wuillème S, To A, Rochat, C, Lepiniec L (2009) Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis. Plant J 60, 933-947

Baud, S., and Lepiniec, L. (2009). Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis. Plant Physiol Biochem 47, 448-455.(Pubmed)

Baud, S., Wuilleme, S., To, A., Rochat, C., and Lepiniec, L. (2009). Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis. Plant J 60, 933-947. (Pubmed)

Ben Amor, B., Wirth, S., Merchan, F., Laporte, P., d'Aubenton-Carafa, Y., Hirsch, J., Maizel, A., Mallory, A., Lucas, A., Deragon, J.M., Vaucheret, H., Thermes, C., and Crespi, M. (2009). Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses. Genome Res 19, 57-69.

Beopoulos, A., Chardot, T., and Nicaud, J.M. (2009). Yarrowia lipolytica: A model and a tool to understand the mechanisms implicated in lipid accumulation. Biochimie 91, 692-696.

Betz, G.A., Knappe, C., Lapierre, C., Olbrich, M., Welzl, G., Langebartels, C., Heller, W., Sandermann, H., and Ernst, D. (2009). Ozone affects shikimate pathway transcripts and monomeric lignin composition in European beech (Fagus sylvatica L.). European Journal of Forest Research 128, 109-116.

Beveridge, C.A., Dun, E.A., and Rameau, C. (2009). Pea has its tendrils in branching discoveries spanning a century from auxin to strigolactones. Plant Physiol 151, 985-990.

Bikard, D., Patel, D., Le Mette, C., Giorgi, V., Camilleri, C., Bennett, M.J., and Loudet, O. (2009). Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana. Science 323, 623-626.

Blein, T. (2009). [A conserved mechanism at the base of leaf dissection]. Med Sci (Paris) 25, 891-893.

Blein, T., Hasson, A., and Laufs, P. (2009). Leaf development: what it needs to be complex. Curr Opin Plant Biol 13, 75-82.

Brewer, P.B., Dun, E.A., Ferguson, B.J., Rameau, C., and Beveridge, C.A. (2009). Strigolactone acts downstream of auxin to regulate bud outgrowth in pea and Arabidopsis. Plant Physiol 150, 482-493.

Broyart, C., Fontaine, J.X., Molinie, R., Cailleu, D., Terce-Laforgue, T., Dubois, F., Hirel, B., and Mesnard, F. (2010). Metabolic profiling of maize mutants deficient for two glutamine synthetase isoenzymes using 1H-NMR-based metabolomics. Phytochem Anal 21, 102-109.

Canas, R.A., Quillere, I., Christ, A., and Hirel, B. (2009). Nitrogen metabolism in the developing ear of maize (Zea mays): analysis of two lines contrasting in their mode of nitrogen management. New Phytol 184, 340-352.

Castaings, L., Camargo, A., Pocholle, D., Gaudon, V., Texier, Y., Boutet-Mercey, S., Taconnat, L., Renou, J.P., Daniel-Vedele, F., Fernandez, E., Meyer, C., and Krapp, A. (2009). The nodule inception-like protein 7 modulates nitrate sensing and metabolism in Arabidopsis. Plant J 57, 426-435.

Cosgrove, D.J., Fincher, G., and Hofte, H. (2009). Plants and the State of the Union. Editorial. Mol Plant 2, 839.

Crowell, E.F., Bischoff, V., Desprez, T., Rolland, A., Stierhof, Y.D., Schumacher, K., Gonneau, M., Hofte, H., and Vernhettes, S. (2009). Pausing of Golgi bodies on microtubules regulates secretion of cellulose synthase complexes in Arabidopsis. Plant Cell 21, 1141-1154.

Curtis, M.J., Belcram, K., Bollmann, S.R., Tominey, C.M., Hoffman, P.D., Mercier, R., and Hays, J.B. (2009). Reciprocal chromosome translocation associated with TDNA-insertion mutation in Arabidopsis: genetic and cytological analyses of consequences for gametophyte development and for construction of doubly mutant lines. Planta 229, 731-745.

d'Erfurth, I., Jolivet, S., Froger, N., Catrice, O., Novatchkova, M., and Mercier, R. (2009). Turning meiosis into mitosis. PLoS Biol 7, e1000124.

De Muyt, A., Pereira, L., Vezon, D., Chelysheva, L., Gendrot, G., Chambon, A., Laine-Choinard, S., Pelletier, G., Mercier, R., Nogue, F., and Grelon, M. (2009). A high throughput genetic screen identifies new early meiotic recombination functions in Arabidopsis thaliana. PLoS Genet 5, e1000654.

de Muyt, A.D., Mercier, R., Mezard, C., and Grelon, M. (2009). Meiotic recombination and crossovers in plants. Genome Dyn 5, 14-25.

Debouba, M., Suzuki, A., Boutet, S., Ghorbel, M., and Gouia, H. (2009). Amino acid changes in leaves and roots of tomato (Solanum lycopersicon) during salt stress. Acta Botanica Gallica sous presse.

Dignac, M.F., Pechot, N., Thevenot, M., Lapierre, C., Bahri, H., Bardoux, G., and Rumpel, C. (2009). Isolation of soil lignins by combination of ball-milling and cellulolysis: Evaluation of purity and isolation efficiency with pyrolysis/GC/MS. Journal of Analytical and Applied Pyrolysis 85, 426-430.

Duroc, Y., Hiard, S., Vrielynck, N., Ragu, S., and Budar, F. (2009). The Ogura sterility-inducing protein forms a large complex without interfering with the oxidative phosphorylation components in rapeseed mitochondria. Plant Mol Biol 70, 123-137.

Elmayan, T., Adenot, X., Gissot, L., Lauressergues, D., Gy, I., and Vaucheret, H. (2009). A neomorphic sgs3 allele stabilizing miRNA cleavage products reveals that SGS3 acts as a homodimer. FEBS J 276, 835-844.

Feria Bourrellier, A.B., Ferrario-Mery, S., Vidal, J., and Hodges, M. (2009). Metabolite regulation of the interaction between Arabidopsis thaliana PII and N-acetyl-l-glutamate kinase. Biochem Biophys Res Commun 387, 700-704.

Fontaine, J.X., Ravel, C., Pageau, K., Heumez, E., Dubois, F., Hirel, B., and Le Gouis, J. (2009). A quantitative genetic study for elucidating the contribution of glutamine synthetase, glutamate dehydrogenase and other nitrogen-related physiological traits to the agronomic performance of common wheat. Theor Appl Genet 119, 645-662.

Fornara, F., Panigrahi, K.C., Gissot, L., Sauerbrunn, N., Ruhl, M., Jarillo, J.A., and Coupland, G. (2009). Arabidopsis DOF transcription factors act redundantly to reduce CONSTANS expression and are essential for a photoperiodic flowering response. Dev Cell 17, 75-86.

Fowler, J.H., Narvaez-Vasquez, J., Aromdee, D.N., Pautot, V., Holzer, F.M., and Walling, L.L. (2009). Leucine aminopeptidase regulates defense and wound signaling in tomato downstream of jasmonic acid. Plant Cell 21, 1239-1251.

Froissard, M., D'Andrea, S., Boulard, C., and Chardot, T. (2009). Heterologous expression of AtClo1, a plant oil body protein, induces lipid accumulation in yeast. Fems Yeast Research 9, 428-438.

Gallois, J.L., Guyon-Debast, A., Lecureuil, A., Vezon, D., Carpentier, V., Bonhomme, S., and Guerche, P. (2009). The Arabidopsis proteasome RPT5 subunits are essential for gametophyte development and show accession-dependent redundancy. Plant Cell 21, 442-459.

Gaudin, V., Andrey, P., Devinoy, E., Kress, C., Kieu, K., Beaujean, N., Maurin, Y., and Debey, P. (2009). Modeling the 3D functional architecture of the nucleus in animal and plant kingdoms. C R Biol 332, 937-946.

Grienenberger, E., Besseau, S., Geoffroy, P., Debayle, D., Heintz, D., Lapierre, C., Pollet, B., Heitz, T., and Legrand, M. (2009). A BAHD acyltransferase is expressed in the tapetum of Arabidopsis anthers and is involved in the synthesis of hydroxycinnamoyl spermidines. Plant Journal 58, 246-259.

Guenin, S., Mauriat, M., Pelloux, J., Van Wuytswinkel, O., Bellini, C., and Gutierrez, L. (2009). Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditions-specific, validation of references. J Exp Bot 60, 487-493.

Gutierrez, L., Bussell, J.D., Pacurar, D.I., Schwambach, J., Pacurar, M., and Bellini, C. (2009). Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance. Plant Cell 21, 3119-3132.

Johannes, F., Porcher, E., Teixeira, F.K., Saliba-Colombani, V., Simon, M., Agier, N., Bulski, A., Albuisson, J., Heredia, F., Audigier, P., Bouchez, D., Dillmann, C., Guerche, P., Hospital, F., and Colot, V. (2009). Assessing the impact of transgenerational epigenetic variation on complex traits. PLoS Genet 5, e1000530.

Jolivet, P., Boulard, C., Bellamy, A., Larre, C., Barre, M., Rogniaux, H., d'Andrea, S., Chardot, T., and Nesi, N. (2009). Protein composition of oil bodies from mature Brassica napus seeds. Proteomics 9, 3268-3284.

Konan, K.E., Durand-Gasselin, T., Kouadio, Y.J., Flori, A., Rival, A., Duval, Y., and Pannetier, C. (2009). In vitro conservation of oil palm somatic embryos for 20 years on a hormone-free culture medium: characteristics of the embryogenic cultures, derived plantlets and adult palms. Plant Cell Rep 29, 1-13.

Labboun, S., Terce-Laforgue, T., Roscher, A., Bedu, M., Restivo, F.M., Velanis, C.N., Skopelitis, D.S., Moschou, P.N., Roubelakis-Angelakis, K.A., Suzuki, A., and Hirel, B. (2009). Resolving the role of plant glutamate dehydrogenase. I. In vivo real time nuclear magnetic resonance spectroscopy experiments. Plant Cell Physiol 50, 1761-1773.

Lachaud, C., Da Silva, D., Cotelle, V., Thuleau, P., Xiong, T.C., Jauneau, A., Briere, C., Graziana, A., Bellec, Y., Faure, J.D., Ranjeva, R., and Mazars, C. (2009). Nuclear calcium controls the apoptotic-like cell death induced by d-erythro-sphinganine in tobacco cells. Cell Calcium 47, 92-100.

Laufs, P., Peaucelle, A., and Hofte, H. (2009). Shaping the meristem by mechanical forces. F-1000, Biology reports 1, 45.

Lefebvre, V., Kiani, S.P., and Durand-Tardif, M. (2009). A Focus on Natural Variation for Abiotic Constraints Response in the Model Species Arabidopsis thaliana. Int J Mol Sci 10, 3547-3582.

Lienard, D., and Nogue, F. (2009). Physcomitrella patens: a non-vascular plant for recombinant protein production. Methods Mol Biol 483, 135-144.

Loulakakis, K., Morot-Gaudry, J., Velanis, C., Skopelitis, D., Moschou, P., Hire, l.B., and Roubelakis-Angelakis, K. (2009). Advancements in nitrogen metabolism in grapevine. In : Grapevine molecular physiology and biotechnology. In Grapevine molecular physiology and biotechnology, K. Roubelakis-Angelakis, ed (Netherlands: Springer.

Lu, C., Xin, Z., Ren, Z., Miquel, M., and Browse, J. (2009). An enzyme regulating triacylglycerol composition is encoded by the ROD1 gene of Arabidopsis. Proc Natl Acad Sci U S A 106, 18837-18842.

Mallory, A.C., Hinze, A., Tucker, M.R., Bouche, N., Gasciolli, V., Elmayan, T., Lauressergues, D., Jauvion, V., Vaucheret, H., and Laux, T. (2009). Redundant and specific roles of the ARGONAUTE proteins AGO1 and ZLL in development and small RNA-directed gene silencing. PLoS Genet 5, e1000646.

Mallory, A.C., and Vaucheret, H. (2009). ARGONAUTE 1 homeostasis invokes the coordinate action of the microRNA and siRNA pathways. EMBO Rep 10, 521-526.

Manetti, M.E., Rossi, M., Nakabashi, M., Grandbastien, M.A., and Van Sluys, M.A. (2009). The Tnt1 family member Retrosol copy number and structure disclose retrotransposon diversification in different Solanum species. Mol Genet Genomics 281, 261-271.

Manicacci, D., Camus-Kulandaivelu, L., Fourmann, M., Arar, C., Barrault, S., Rousselet, A., Feminias, N., Consoli, L., Frances, L., Mechin, V., Murigneux, A., Prioul, J.L., Charcosset, A., and Damerval, C. (2009). Epistatic Interactions between Opaque2 Transcriptional Activator and Its Target Gene CyPPDK1 Control Kernel Trait Variation in Maize. Plant Physiology 150, 506-520.

Martin, A., Troadec, C., Boualem, A., Rajab, M., Fernandez, R., Morin, H., Pitrat, M., Dogimont, C., and Bendahmane, A. (2009). A transposon-induced epigenetic change leads to sex determination in melon. Nature 461, 1135-1138.

Matakiadis, T., Alboresi, A., Jikumaru, Y., Tatematsu, K., Pichon, O., Renou, J.P., Kamiya, Y., Nambara, E., and Truong, H.N. (2009). The Arabidopsis abscisic acid catabolic gene CYP707A2 plays a key role in nitrate control of seed dormancy. Plant Physiol 149, 949-960.

Matre, P., Meyer, C., and Lillo, C. (2009). Diversity in subcellular targeting of the PP2A B'eta subfamily members. Planta 230, 935-945.

Matsuno, M., Compagnon, V., Schoch, G.A., Schmitt, M., Debayle, D., Bassard, J.E., Pollet, B., Hehn, A., Heintz, D., Ullmann, P., Lapierre, C., Bernier, F., Ehlting, J., and Werck-Reichhart, D. (2009). Evolution of a Novel Phenolic Pathway for Pollen Development. Science 325, 1688-1692.

Maumus, F., Allen, A.E., Mhiri, C., Hu, H., Jabbari, K., Vardi, A., Grandbastien, M.A., and Bowler, C. (2009). Potential impact of stress activated retrotransposons on genome evolution in a marine diatom. BMC Genomics 10, 624.

Melser, S., Batailler, B., Peypelut, M., Poujol, C., Bellec, Y., Wattelet-Boyer, V., Maneta-Peyret, L., Faure, J.D., and Moreau, P. (2009). Glucosylceramide Biosynthesis is Involved in Golgi Morphology and Protein Secretion in Plant Cells. Traffic 11, 479-490.

Minic, Z., Jamet, E., San-Clemente, H., Pelletier, S., Renou, J.P., Rihouey, C., Okinyo, D.P., Proux, C., Lerouge, P., and Jouanin, L. (2009). Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes. BMC Plant Biol 9, 6.

Monachello, D., Allot M, Oliva S, Krapp A, Daniel-Vedele F, Barbier-Brygoo H, Ephritikhine G. (2009). Two anion transporters AtClCa and AtClCe fulfil interconnecting but not redundant roles in nitrate assimilation pathways. New Phytol 183, 88 -94.

Morse, A.M., Whetten, R.W., Dubos, C., and Campbell, M.M. (2009). Post-translational modification of an R2R3-MYB transcription factor by a MAP Kinase during xylem development. New Phytol 183, 1001-1013.

Muyt, A.D., Mercier, R., Mezard, C., and Grelon, M. (2009). Meiotic recombination and crossovers in plants. Genome Dyn 5, 14-25.

Nelieu, S., Perreau, F., Bonnemoy, F., Ollitrault, M., Azam, D., Lagadic, L., Bohatier, J., and Einhorn, J. (2009). Sunlight nitrate-induced photodegradation of chlorotoluron: evidence of the process in aquatic mesocosms. Environ Sci Technol 43, 3148-3154.

Nesi, N., Lucas, M.O., Auger, B., Baron, C., Lecureuil, A., Guerche, P., Kronenberger, J., Lepiniec, L., Debeaujon, I., and Renard, M. (2009). The promoter of the Arabidopsis thaliana BAN gene is active in proanthocyanidin-accumulating cells of the Brassica napus seed coat. Plant Cell Rep 28, 601-617. (Pubmed)

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Parisod, C., Salmon, A., Zerjal, T., Tenaillon, M., Grandbastien, M.A., and Ainouche, M. (2009). Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina. New Phytol 184, 1003-1015.

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Potel, F., Valadier, M.H., Ferrario-Mery, S., Grandjean, O., Morin, H., Gaufichon, L., Boutet-Mercey, S., Lothier, J., Rothstein, S.J., Hirose, N., and Suzuki, A. (2009). Assimilation of excess ammonium into amino acids and nitrogen translocation in Arabidopsis thaliana--roles of glutamate synthases and carbamoylphosphate synthetase in leaves. FEBS J 276, 4061-4076.

Pouteau, S., and Albertini, C. (2009). The significance of bolting and floral transitions as indicators of reproductive phase change in Arabidopsis. J Exp Bot 60, 3367-3377.

Punginelli, C., Wilson, A., Routaboul, J.M., and Kirilovsky, D. (2009). Influence of zeaxanthin and echinenone binding on the activity of the orange carotenoid protein. Biochim Biophys Acta 1787, 280-288.

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Riboulet, C., Guillaumie, S., Mechin, V., Bosio, M., Pichon, M., Goffner, D., Lapierre, C., Pollet, B., Lefevre, B., Martinant, J.P., and Barriere, Y. (2009). Kinetics of Phenylpropanoid Gene Expression in Maize Growing Internodes: Relationships with Cell Wall Deposition. Crop Science 49, 211-223.

Rousset, P., Lapierre, C., Pollet, B., Quirino, W., and Perre, P. (2009). Effect of severe thermal treatment on spruce and beech wood lignins. Annals of Forest Science 66.

Ruel, K., Berrio-Sierra, J., Derikvand, M.M., Pollet, B., Thevenin, J., Lapierre, C., Jouanin, L., and Joseleau, J.P. (2009). Impact of CCR1 silencing on the assembly of lignified secondary walls in Arabidopsis thaliana. New Phytol 184, 99-113.

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2008

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Angleles Nuñez, J.G., Kronenberger, J., Wuillème, S., Lepiniec, L., and Rochat, C. (2008). Study of AtSUS2 localization in seeds reveals a strong association with plastids. Plant Cell Physiol 49, 1621-1626.

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Blein, T., Pulido, A., Vialette-Guiraud, A., Nikovics, K., Morin, H., Hay, A., Johansen, I.E., Tsiantis, M., and Laufs, P. (2008). A conserved molecular framework for compound leaf development. Science 322, 1835-1839.

Boualem, A., Fergany, M., Fernandez, R., Troadec, C., Martin, A., Morin, H., Sari, M.A., Collin, F., Flowers, J.M., Pitrat, M., Purugganan, M.D., Dogimont, C., and Bendahmane, A. (2008). A conserved mutation in an ethylene biosynthesis enzyme leads to andromonoecy in melons. Science 321, 836-838.

Bouchabke, O., Chang, F., Simon, M., Voisin, R., Pelletier, G., and Durand-Tardif, M. (2008). Natural variation in Arabidopsis thaliana as a tool for highlighting differential drought responses. PLoS One 3, e1705.

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Castaings, L., Camargo, A., Pocholle, D., Gaudon, V., Texier, Y., Boutet-Mercey, S., Taconnat, L., Renou, J.P., Daniel-Vedele, F., Fernandez, E., Meyer, C., and Krapp, A. (2008). The nodule inception-like protein 7 modulates nitrate sensing and metabolism in Arabidopsis. Plant J 57, 426-435.

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Chelysheva, L., Vezon, D., Belcram, K., Gendrot, G., and Grelon, M. (2008). The Arabidopsis BLAP75/Rmi1 homologue plays crucial roles in meiotic double-strand break repair. PLoS Genet 4, e1000309.

Coque, M., Martin, A., Veyrieras, J.B., Hirel, B., and Gallais, A. (2008). Genetic variation for N-remobilization and postsilking N-uptake in a set of maize recombinant inbred lines. 3. QTL detection and coincidences. Theor Appl Genet 117, 729-747.

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Derikvand, M.M., Sierra, J.B., Ruel, K., Pollet, B., Do, C.T., Thevenin, J., Buffard, D., Jouanin, L., and Lapierre, C. (2008). Redirection of the phenylpropanoid pathway to feruloyl malate in Arabidopsis mutants deficient for cinnamoyl-CoA reductase 1. Planta 227, 943-956.

Deveaux, Y., Toffano-Nioche, C., Claisse, G., Thareau, V., Morin, H., Laufs, P., Moreau, H., Kreis, M., and Lecharny, A. (2008). Genes of the most conserved WOX clade in plants affect root and flower development in Arabidopsis. BMC Evol Biol 8, 291.

Diaz, C., Lemaitre, T., Christ, A., Azzopardi, M., Kato, Y., Sato, F., Morot-Gaudry, J.F., Le Dily, F., and Masclaux-Daubresse, C. (2008). Nitrogen recycling and remobilization are differentially controlled by leaf senescence and development stage in Arabidopsis under low nitrogen nutrition. Plant Physiol 147, 1437-1449.

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Dubos, C., Le Gourrierec, J., Baudry, A., Huep, G., Lanet, E., Debeaujon, I., Routaboul, J.M., Alboresi, A., Weisshaar, B., and Lepiniec, L. (2008). MYBL2 is a new regulator of flavonoid biosynthesis in Arabidopsis thaliana. Plant J 55, 940-953.

Eglin, T., Maunoury-Danger, F., Fresneau, C., Lelarge, C., Pollet, B., Lapierre, C., Francois, C., and Damesin, C. (2008). Biochemical composition is not the main factor influencing variability in carbon isotope composition of tree rings. Tree Physiology 28, 1619-1628.

Es-Safi, N.E., Le Guerneve, C., and Ducrot, P.H. (2008). Application of NMR spectroscopy and mass spectrometry to the structural elucidation of modified flavan-3-ols and their coupling reaction products. Spectroscopy Letters 41, 41-56.

Es-Safi, N.E., Meudec, E., Bouchut, C., Fulcrand, H., Ducrot, P.H., Herbette, G., and Cheynier, V. (2008). New compounds obtained by evolution and oxidation of malvidin 3-O-glucoside in ethanolic medium. Journal of Agricultural and Food Chemistry 56, 4584-4591.

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Fardet, A., Llorach, R., Orsoni, A., Martin, C.F., Pujos-Guillot, E., Lapierre, C., and Scalbert, A. (2008). Metabolomics provide new insight on the metabolism of dietary phytochemicals in rats. Journal of Nutrition 138, 1282-1287.

Ferrario-Mery, S., Meyer, C., and Hodges, M. (2008). Chloroplast nitrite uptake is enhanced in Arabidopsis PII mutants. FEBS Lett 582, 1061-1066.

Ghanem, A., Bados, P., Perreau, F., Benabdallah, R., Plagellat, C., de Alencastro, L.F., and Einhorn, J. (2008). Multiresidue analysis of atrazine, diuron and their degradation products in sewage sludge by liquid chromatography tandem mass spectrometry. Anal Bioanal Chem 391, 345-352.

Ghidouche, S., Es-Safi, N.E., and Ducrot, P.H. (2008). Mechanistic study on the enzymatic oxidation of flavonols. Tetrahedron Letters 49, 619-623.

Gomez-Roldan, V., Fermas, S., Brewer, P.B., Puech-Pages, V., Dun, E.A., Pillot, J.P., Letisse, F., Matusova, R., Danoun, S., Portais, J.C., Bouwmeester, H., Becard, G., Beveridge, C.A., Rameau, C., and Rochange, S.F. (2008). Strigolactone inhibition of shoot branching. Nature 455, 189-194.

Gonzalez-Melendi, P., Uyttewaal, M., Morcillo, C.N., Hernandez Mora, J.R., Fajardo, S., Budar, F., and Lucas, M.M. (2008). A light and electron microscopy analysis of the events leading to male sterility in Ogu-INRA CMS of rapeseed (Brassica napus). J Exp Bot 59, 827-838.

Grandbastien, M.A. (2008). Retrotransposons of plants. In "Encyclopedia of Virology, Third Edition", B.W.J. Mahy and a.M.H.V. Van Regenmortel, eds (Oxford (UK) Elsevier), pp. pp428-436.

Grappin, P., Bourdais, G., Collet, B., Godin, B., Job, D., Oge, L., Jullien, M., and Rajjou, L. (2008). [Seed aging and survival mechanisms]. J Soc Biol 202, 231-239.

Guermonprez, H., Smertenko, A., Crosnier, M.T., Durandet, M., Vrielynck, N., Guerche, P., Hussey, P.J., Satiat-Jeunemaitre, B., and Bonhomme, S. (2008). The POK/AtVPS52 protein localizes to several distinct post-Golgi compartments in sporophytic and gametophytic cells. J Exp Bot 59, 3087-3098.

Hematy, K., and Hofte, H. (2008). Novel receptor kinases involved in growth regulation. Curr Opin Plant Biol 11, 321-328.

Higgins, J.D., Vignard, J., Mercier, R., Pugh, A.G., Franklin, F.C., and Jones, G.H. (2008). AtMSH5 partners AtMSH4 in the class I meiotic crossover pathway in Arabidopsis thaliana, but is not required for synapsis. Plant J 55, 28-39.

Holdsworth, M.J., Finch-Savage, W.E., Grappin, P., and Job, D. (2008). Post-genomics dissection of seed dormancy and germination. Trends Plant Sci 13, 7-13.

Jolivet, P., Boulard, C., Chardot, T., and Anton, M. (2008). New insights into the structure of apolipoprotein B from low-density lipoproteins and identification of a novel YGP-like protein in hen egg yolk. Journal of Agricultural and Food Chemistry 56, 5871-5879.

Jubault, M., Lariagon, C., Simon, M., Delourme, R., and Manzanares-Dauleux, M.J. (2008). Identification of quantitative trait loci controlling partial clubroot resistance in new mapping populations of Arabidopsis thaliana. Theor Appl Genet 117, 191-202.

Kopecny, D., Sebela, M., Briozzo, P., Spichal, L., Houba-Herin, N., Masek, V., Joly, N., Madzak, C., Anzenbacher, P., and Laloue, M. (2008). Mechanism-based inhibitors of cytokinin oxidase/dehydrogenase attack FAD cofactor. J Mol Biol 380, 886-899.

Lauriere, M., Gorner, P., Bouchez-Mahiout, I., Wrobel, R., Breton, C., Fabries, J.F., and Choudat, D. (2008). Physical and Biochemical Properties of Airborne Flour Particles Involved in Occupational Asthma. Annals of Occupational Hygiene 52, 727-737.

Lazrek, F., Roussel, V., Ronfort, J., Cardinet, G., Chardon, F., Aouani, M.E., and Huguet, T. (2008). The use of neutral and non-neutral SSRs to analyse the genetic structure of a Tunisian collection of Medicago truncatula lines and to reveal associations with eco-environmental variables. Genetica 135, 391-402.

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Lemaitre, T., Gaufichon, L., Boutet-Mercey, S., Christ, A., and Masclaux-Daubresse, C. (2008). Enzymatic and metabolic diagnostic of nitrogen deficiency in Arabidopsis thaliana Wassileskija accession. Plant Cell Physiol 49, 1056-1065.

Lemoigne, N., Montes, E., Pannetier, C., Hofte, H., and Navard, P. (2008). Gradient in dissolution capacity of successively deposited cell wall layers in cotton fibres. Macromol. Symposia 262, 65-71.

Lienard, D., Durambur, G., Kiefer-Meyer, M.C., Nogue, F., Menu-Bouaouiche, L., Charlot, F., Gomord, V., and Lassalles, J.P. (2008). Water transport by aquaporins in the extant plant Physcomitrella patens. Plant Physiol 146, 1207-1218.

Lohmiller, L.D., De Muyt, A., Howard, B., Offenberg, H.H., Heyting, C., Grelon, M., and Anderson, L.K. (2008). Cytological analysis of MRE11 protein during early meiotic prophase I in Arabidopsis and tomato. Chromosoma 117, 277-288.

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Ludewig, F., Huser, A., Fromm, H., Beauclair, L., and Bouche, N. (2008). Mutants of GABA transaminase (POP2) suppress the severe phenotype of succinic semialdehyde dehydrogenase (ssadh) mutants in Arabidopsis. PLoS ONE 3, e3383.

Macaisne, N., Novatchkova, M., Peirera, L., Vezon, D., Jolivet, S., Froger, N., Chelysheva, L., Grelon, M., and Mercier, R. (2008). SHOC1, an XPF endonuclease-related protein, is essential for the formation of class I meiotic crossovers. Curr Biol 18, 1432-1437.

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Perez-Hormaeche, J., Potet, F., Beauclair, L., Le Masson, I., Courtial, B., Bouche, N., and Lucas, H. (2008). Invasion of the Arabidopsis genome by the tobacco retrotransposon Tnt1 is controlled by reversible transcriptional gene silencing. Plant Physiol 147, 1264-1278.

Polge, C., Jossier, M., Crozet, P., Gissot, L., and Thomas, M. (2008). Beta-subunits of the SnRK1 complexes share a common ancestral function together with expression and function specificities; physical interaction with nitrate reductase specifically occurs via AKINbeta1-subunit. Plant Physiol 148, 1570-1582.

Pouch-Pelissier, M.N., Pelissier, T., Elmayan, T., Vaucheret, H., Boko, D., Jantsch, M.F., and Deragon, J.M. (2008). SINE RNA induces severe developmental defects in Arabidopsis thaliana and interacts with HYL1 (DRB1), a key member of the DCL1 complex. PLoS Genet 4, e1000096.

Pouilly, N., Delourme, R., Alix, K., and Jenczewski, E. (2008). Repetitive sequence-derived markers tag centromeres and telomeres and provide insights into chromosome evolution in Brassica napus. Chromosome Res 16, 683-700.

Pouteau, S., Carre, I., Gaudin, V., Ferret, V., Lefebvre, D., and Wilson, M. (2008). Diversification of photoperiodic response patterns in a collection of early-flowering mutants of Arabidopsis. Plant Physiol 148, 1465-1473.

Prioul, J.L., Mechin, V., Lessard, P., Thevenot, C., Grimmer, M., Chateau-Joubert, S., Coates, S., Hartings, H., Kloiber-Maitz, M., Murigneux, A., Sarda, X., Damerval, C., and Edwards, K.J. (2008). A joint transcriptomic, proteomic and metabolic analysis of maize endosperm development and starch filling. Plant Biotechnology Journal 6, 855-869.

Purkrtova, Z., Jolivet, P., Miquel, M., and Chardot, T. (2008). Structure and function of seed lipid-body-associated proteins. C R Biol 331, 746-754.

Purkrtova, Z., Le Bon, C., Kralova, B., Ropers, M.H., Anton, M., and Chardot, T. (2008). Caleosin of Arabidopsis thaliana: Effect of Calcium on Functional and Structural Properties. Journal of Agricultural and Food Chemistry 56, 11217-11224.

Ragni, L., Belles-Boix, E., Gunl, M., and Pautot, V. (2008). Interaction of KNAT6 and KNAT2 with BREVIPEDICELLUS and PENNYWISE in Arabidopsis inflorescences. Plant Cell 20, 888-900.

Rajjou, L., and Debeaujon, I. (2008). Seed longevity: survival and maintenance of high germination ability of dry seeds. C R Biol 331, 796-805.

Rajjou, L., Lovigny, Y., Groot, S.P., Belghazi, M., Job, C., and Job, D. (2008). Proteome-wide characterization of seed aging in Arabidopsis: a comparison between artificial and natural aging protocols. Plant Physiol 148, 620-641.

Ralet, M.C., Crepeau, M.J., Lefebvre, J., Mouille, G., Hofte, H., and Thibault, J.F. (2008). Reduced number of homogalacturonan domains in pectins of an Arabidopsis mutant enhances the flexibility of the polymer. Biomacromolecules 9, 1454-1460.

Ralph, J., Kim, H., Lu, F., Grabber, J.H., Leple, J.C., Berrio-Sierra, J., Derikvand, M.M., Jouanin, L., Boerjan, W., and Lapierre, C. (2008). Identification of the structure and origin of a thioacidolysis marker compound for ferulic acid incorporation into angiosperm lignins (and an indicator for cinnamoyl CoA reductase deficiency). Plant J 53, 368-379.

Raman, S., Greb, T., Peaucelle, A., Blein, T., Laufs, P., and Theres, K. (2008). Interplay of miR164, CUP-SHAPED COTYLEDON genes and LATERAL SUPPRESSOR controls axillary meristem formation in Arabidopsis thaliana. Plant J 55, 65-76.

Ravalason, H., Jan, G., Molle, D., Pasco, M., Coutinho, P.M., Lapierre, C., Pollet, B., Bertaud, F., Petit-Conil, M., Grisel, S., Sigoillot, J.C., Asther, M., and Herpoel-Gimbert, I. (2008). Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood. Applied Microbiology and Biotechnology 80, 719-733.

Richard-Molard, C., Krapp, A., Brun, F., Ney, B., Daniel-Vedele, F., and Chaillou, S. (2008). Plant response to nitrate starvation is determined by N storage capacity matched by nitrate uptake capacity in two Arabidopsis genotypes. J Exp Bot 59, 779-791.

Ronceret, A., Gadea-Vacas, J., Guilleminot, J., Lincker, F., Delorme, V., Lahmy, S., Pelletier, G., Chaboute, M.E., and Devic, M. (2008). The first zygotic division in Arabidopsis requires de novo transcription of thymidylate kinase. Plant J 53, 776-789.

Ruggeberg, M., Speck, T., Paris, O., Lapierre, C., Pollet, B., Koch, G., and Burgert, I. (2008). Stiffness gradients in vascular bundles of the palm Washingtonia robusta. Proceedings of the Royal Society B-Biological Sciences 275, 2221-2229.

Salmon, A., Clotault, J., Jenczewski, E., Chable, V., and Manzanares-Dauleux, M. (2008). Brassica oleracea displays a high level of DNA-methylation polymorphism. Plant Science 174, 61-70.

Santos-Mendoza, M., Dubreucq, B., Baud, S., Parcy, F., Caboche, M., and Lepiniec, L. (2008). Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis. Plant J 54, 608-620.

Shankar, M.V., Nelieu, S., Kerhoas, L., and Einhorn, J. (2008). Natural sunlight NO(3)(-)/NO(2)(-)-induced photo-degradation of phenylurea herbicides in water. Chemosphere 71, 1461-1468.

Sicard, O., Loudet, O., Keurentjes, J.J., Candresse, T., Le Gall, O., Revers, F., and Decroocq, V. (2008). Identification of quantitative trait loci controlling symptom development during viral infection in Arabidopsis thaliana. Mol Plant Microbe Interact 21, 198-207.

Simon, M., Loudet, O., Durand, S., Berard, A., Brunel, D., Sennesal, F.X., Durand-Tardif, M., Pelletier, G., and Camilleri, C. (2008). Quantitative trait loci mapping in five new large recombinant inbred line populations of Arabidopsis thaliana genotyped with consensus single-nucleotide polymorphism markers. Genetics 178, 2253-2264.

Stranska, J., Snegaroff, J., Tylichova, M., Kopecny, D., and Sebela, M. (2008). Cloning and expression of plant ornithine delta-aminotransferase. Febs Journal 275, 177-177.

Tellier, F., Fritz, R., Kerhoas, L., Ducrot, P.H., Einhorn, J., Carlin-Sinclair, A., and Leroux, P. (2008). Characterization of metabolites of fungicidal cymoxanil in a sensitive strain of Botrytis cinerea. J Agric Food Chem 56, 8050-8057.

Thibeault-Martel, M., Krause, C., Morin, H., and Rossi, S. (2008). Cambial activity and intra-annual xylem formation in roots and stems of Abies balsamea and Picea mariana. Ann Bot (Lond) 102, 667-674.

Truernit, E., Bauby, H., Dubreucq, B., Grandjean, O., Runions, J., Barthelemy, J., and Palauqui, J.C. (2008). High-resolution whole-mount imaging of three-dimensional tissue organization and gene expression enables the study of Phloem development and structure in Arabidopsis. Plant Cell 20, 1494-1503.

Truernit, E., and Haseloff, J. (2008). Arabidopsis thaliana outer ovule integument morphogenesis: ectopic expression of KNAT1 reveals a compensation mechanism. BMC Plant Biol 8, 35.

Truernit, E., and Haseloff, J. (2008). A simple way to identify non-viable cells within living plant tissue using confocal microscopy. Plant Methods 4, 15.

Tylichova, M., Briozzo, P., Kopecny, D., Ferrero, J., Morera, S., Joly, N., Snegaroff, J., and Sebela, M. (2008). Purification, crystallization and preliminary crystallographic study of a recombinant plant aminoaldehyde dehydrogenase from Pisum sativum. Acta Crystallographica Section F-Structural Biology and Crystallization Communications 64, 88-90.

Ulker, B., Peiter, E., Dixon, D.P., Moffat, C., Capper, R., Bouche, N., Edwards, R., Sanders, D., Knight, H., and Knight, M.R. (2008). Getting the most out of publicly available T-DNA insertion lines. Plant J 56, 665-677.

Uyttewaal, M., Arnal, N., Quadrado, M., Martin-Canadell, A., Vrielynck, N., Hiard, S., Gherbi, H., Bendahmane, A., Budar, F., and Mireau, H. (2008). Characterization of Raphanus sativus pentatricopeptide repeat proteins encoded by the fertility restorer locus for Ogura cytoplasmic male sterility. Plant Cell 20, 3331-3345.

Uyttewaal, M., Mireau, H., Rurek, M., Hammani, K., Arnal, N., Quadrado, M., and Giege, P. (2008). PPR336 is associated with polysomes in plant mitochondria. J Mol Biol 375, 626-636.

Valadier, M.H., Yoshida, A., Grandjean, O., Morin, H., Kronenberger, J., Boutet, S., Raballand, A., Hase, T., Yoneyama, T., and Suzuki, A. (2008). Implication of the glutamine synthetase/glutamate synthase pathway in conditioning the amino acid metabolism in bundle sheath and mesophyll cells of maize leaves. FEBS J 275, 3193-3206.

Vaucheret, H. (2008). Plant ARGONAUTES. Trends Plant Sci 13, 350-358.

Wang, Z., Luo, Y., Li, X., Wang, L., Xu, S., Yang, J., Weng, L., Sato, S., Tabata, S., Ambrose, M., Rameau, C., Feng, X., Hu, X., and Luo, D. (2008). Genetic control of floral zygomorphy in pea (Pisum sativum L.). Proc Natl Acad Sci U S A 105, 10414-10419.

Weston, D.E., Elliott, R.C., Lester, D.R., Rameau, C., Reid, J.B., Murfet, I.C., and Ross, J.J. (2008). The Pea DELLA proteins LA and CRY are important regulators of gibberellin synthesis and root growth. Plant Physiol 147, 199-205.

Wilson, A., Punginelli, C., Gall, A., Bonetti, C., Alexandre, M., Routaboul, J.M., Kerfeld, C.A., van Grondelle, R., Robert, B., Kennis, J.T., and Kirilovsky, D. (2008). A photoactive carotenoid protein acting as light intensity sensor. Proc Natl Acad Sci U S A 105, 12075-12080.

Zabotina, O.A., van de Ven, W.T., Freshour, G., Drakakaki, G., Cavalier, D., Mouille, G., Hahn, M.G., Keegstra, K., and Raikhel, N.V. (2008). Arabidopsis XXT5 gene encodes a putative alpha-1,6-xylosyltransferase that is involved in xyloglucan biosynthesis. Plant J 56, 101-115.


2007

Chiurugwi T, Pouteau S, Nicholls D, Tooke F, Ordidge M, Battey N (2007) Floral meristem indeterminacy depends on flower position and is facilitated by acarpellate gynoecium development in Impatiens balsamina L. New Phytol 173, 79-90 (PubMed)

Dadejová M, Lim YK, Soucková-Skalická K, Matyásek R, Grandbastien M-A, Leitch AR and Kovarík A (2007) Transcription activity of rRNA genes correlates with their tendency towards intergenomic homogenisation in Nicotiana allotetraploids. New Phytol 174, 658-668 (PubMed)

Desprez T, Juraniec M, Crowell E, Jouy H, Pochylova Z, Parcy F, Höfte H, Gonneau M and Vernhettes S
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Divol F, Vilaine F, Thibivilliers, Kusiak C, Sauge M-H, Dinant S (2007) Involvement of the xyloglucan endotransglycosylase/hydrolases encoded by celery XTH1 and Arabidopsis XTH33 in the phloem response to aphids. Plant Cell Environ 30, 187-20. (PubMed)

Do C-T, Pollet B, Thévenin J, Sibout R, Denoue D, Barrière Y, Lapierre C, Jouanin L.(2007) Both caffeoyl CoA enzyme 3-O-methyltransferase and caffeic acid O-methyltransferase I are involved in redundant functions for lignins, flavonoids and sinapoyl malate biosynthesis in Arabidopsis. Planta, 226, 1117-29 (PubMed)

Emons, A-MC., Höfte, H., Mulder, BM. (2007) Microtubules and Cellulose Microfibrills, how intimate is their relation? Trends in Plant Science, 279-81. (PubMed-lien)

Gy, V Gasciolli, D Lauressergues, J-B Morel, J Gombert, F Proux, C Proux, H Vaucheret, and AC. Mallory (2007) Plant Cell Arabidopsis FIERY1, XRN2, and XRN3 Are Endogenous RNA Silencing Suppressors Nov;19(11):3451-61(PubMed) and free download

Hématy, K., Sado, P-E., Van Tuinen, A., Rochange, S., Desnos, T., Balzergue, S., Pelletier, S., Renou, J-P., and Höfte, H. (2007) A Receptor-Like Kinase mediates the response of Arabidopsis cells to the inhibition of cellulose synthesis. Current Biology, 17, 922-931. (PubMed)

Kannangara, R., Branigan, C., Liu, Y., Penfield, T., Rao, V., Mouille, G., Höfte, H., Pauly, M., Riechmann, J-L., and Broun, P. (2007) The transcription factor WIN1/SHN1 regulates Cutin biosynthesis Arabidopsis thaliana. Plant Cell 19, 1278-1294. (PubMed)

Le QH, Melayah D, Bonnivard E, Petit M and Grandbastien M-A (2007). Distribution dynamics of the Tnt1 retrotransposon in tobacco. Mol Gen Genet 278, 639-651 (PubMed)

Lim KY, Kovarik A, Matyasek R, Chase MW, Clarkson JJ, Grandbastien M-A, Leitch AR (2007) Near complete genome turnover in five million years of plant evolution. New Phytol 175, 756–763 (PubMed)

Marinova K, Pourcel L, Weder B, Schwarz M, Barron D, Routaboul JM, Debeaujon I, Klein M. (2007) The Arabidopsis MATE transporter TT12 acts as a vacuolar flavonoid/H+ -antiporter active in proanthocyanidin-accumulating cells of the seed coat. Plant Cell. 19, 2023-2038 (PubMed)

Mouille G., Ralet M.-C., Cavelier C., Eland C., Effroy D., Hématy, K., McCartney L., Truong H.N., Gaudon V., Thibault J.-F. , Marchant A., Höfte H. (2007) Homogalacturonan synthesis in Arabidopsis thaliana requires a novel Golgi-localized protein with a putative methyl-transferase domain. Plant J 50, 605-614 (PubMed)

Mourrain P, van Blockland R, Kooter J, Vaucheret H (2007) A single transgene locus triggers both transcriptional and post-transcriptional silencing through double-stranded RNA production. Planta 225, 365-79 (PubMed)

Petit M, Lim KY, Julio E, Poncet C, Dorlhac De Borne F, Kovarik A, Leitch AR, Grandbastien M-A and Mhiri C
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Peaucelle A, Morin H, Traas J, Laufs P. (2007) Plants expressing a miR164-resistant CUC2 gene reveal the importance of post-meristematic maintenance of phyllotaxy in Arabidopsis. Development, 134, 1045-1050 (PubMed)

Ragni, L., Truernit, E., Pautot, V. (2007). KNOXing on the BELL: TALE Homeobox Genes and Meristem Activity. IJPDP1: 42-48

Tam SM, Causse M, Garchery C, Burck H, Mhiri C and Grandbastien M-A (2007) The distribution of copia-type retrotransposons and the evolutionary history of tomato and related wild species. J Evolution Biol 20,1056-1072 (PubMed)

Tessadori, F., Chupeau, M.C., Chupeau, Y., Knip, M., Germann, S., van Driel, R., Fransz, P., and Gaudin, V. (2007). Large-scale dissociation and sequential reassembly of pericentric heterochromatin in dedifferentiated Arabidopsis cells. J Cell Sci 120, 1200-1208. (PubMed)

Urbanowicz BR, Bennett AB, Del Campillo E, Catalá C, Hayashi T, Henrissat B, Höfte H, McQueen-Mason SJ, Patterson SE, Shoseyov O, Teeri TT, Rose JK. (2007) Structural Organization and a Standardized Nomenclature for Plant Endo-1,4-beta-Glucanases (Cellulases) of Glycosyl Hydrolase Family 9. Plant Physiol. 144,1693-6. (PubMed)

Zhang X, Germann S, Blus BJ, Khorasanizadeh S, Gaudin V, Jacobsen SE. (2007) The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation. Nat Struct Mol Biol. 2007 Aug 5 (PubMed)

Baud S, Mendoza MS, To A, Harscoët E, Lepiniec L, Dubreucq B. (2007a) WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis. Plant J. 50, 825-838. (PubMed)

Baud S, Wuillème S, Dubreucq B, de Almeida A, Vuagnat C, Lepiniec L, Miquel M, Rochat C. (2007b) Function of plastidial pyruvate kinases in seeds of Arabidopsis thaliana. Plant J. 52, 405-419. (PubMed)

d'Andréa S, Canonge M, Beopoulos A, Jolivet P, Hartmann MA, Miquel M, Lepiniec L, Chardot T. (2007) At5g50600 encodes a member of the short-chain dehydrogenase reductase superfamily with 11beta- and 17beta-hydroxysteroid dehydrogenase activities associated with Arabidopsis thaliana seed oil bodies. Biochimie 89, 222-229. (PubMed)

Dall'Osto L, Cazzaniga S, North H, Marion-Poll A, Bassi R (2007) The aba4 mutant of Arabidopsis thaliana reveals a specific function for neoxanthin in protection against photooxidative stress. Plant Cell 19, 1048-1064 (PubMed)

Macquet A, Ralet MC, Kronenberger J, Marion-Poll A, North HM (2007a) In situ chemical and macromolecular study of the composition of Arabidopsis thaliana seed coat mucilage. Plant Cell Physiol 48, 984-999 (PubMed)

Macquet A, Ralet MC, Loudet O, Kronenberger J, Mouille G, Marion-Poll A, North HM (2007b) A naturally occurring mutation in an Arabidopsis accession affects a β-galactosidase that increases the hydrophilic potential of rhamnogalacturonan I in seed mucilage. Plant Cell 19, 3990-4006 (Pubmed)

Marinova K, Pourcel L, Weder B, Schwarz M, Barron D, Routaboul JM, Debeaujon I, Klein M. (2007) The Arabidopsis MATE transporter TT12 acts as a vacuolar flavonoid/H+ -antiporter active in proanthocyanidin-accumulating cells of the seed coat. Plant Cell. 19, 2023-2038 (PubMed)

North H, De Almeida A, Boutin JP, Frey A, To A, Botran L, Sotta B, Marion-Poll A (2007) The Arabidopsis ABA-deficient mutant aba4 demonstrates that the major route for stress-induced ABA accumulation is via neoxanthin isomers. Plant J 50, 810-824 (PubMed)

Pourcel L, Routaboul JM, Cheynier V, Lepiniec L, Debeaujon I. (2007) Flavonoid oxidation in plants: from biochemical properties to physiological functions. Trends Plant Sci. 12, 29-36 (PubMed)

Chopin F, Orsel M, Dorbe MF, Chardon F, Truong HN, Miller AJ, Krapp A, Daniel-Vedele F (2007) The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds. Plant Cell 19, 1590-1602

Chopin F, Wirth J, Dorbe M-F, Lejay L, Krapp A, Gojon A, Daniel-Vedele F (2007) The Arabidopsis nitrate transporter AtNRT2.1 is targeted to the root plasma membrane. Plant Physiology and Biochemistry 45, 630-635

Debouba M, Maaroufi-Dghimi H, Suzuki A, Ghorbel MH, Gouia H (2007) Changes in growth and activity of enzymes involved in nitrate reduction and ammonium assimilation in tomato seedlings in response to NaCl stress. Ann Bot (Lond) 99, 1143-1151

Deprost D, Yao L, Sormani R, Moreau M, Leterreux G, Nicolai M, Bedu M, Robaglia C, Meyer C (2007) The Arabidopsis TOR kinase links plant growth, yield, stress resistance and mRNA translation. EMBO Rep 8, 864-870

Gallais A, Coque M, Le Gouis J, Prioul JL, Hirel B, Quillere I (2007) Estimating the Proportion of Nitrogen Remobilization and of Postsilking Nitrogen Uptake Allocated to Maize Kernels by Nitrogen-15 Labeling. Crop Science 47, 685-691

Hirel B, Chardon F, Durand J (2007) The contribution of molecular physiology to the improvement of nitrogen use efficiency in crops. Journal of Crop Science and Biotechnology 10, 123-132

Hirel B, Le Gouis J, Ney B, Gallais A (2007) The challenge of improving nitrogen use efficiency in crop plants: towards a more central role for genetic variability and quantitative genetics within integrated approaches. J Exp Bot 58, 2369-2387

Kichey T, Hirel B, Heumez E, Dubois F, Le Gouis J (2007) In winter wheat (Triticum aestivum L.), post-anthesis nitrogen uptake and remobilisation to the grain correlates with agronomic traits and nitrogen physiological markers. Field Crops Research 102, 22-32

Loudet O, Saliba-Colombani V, Camilleri C, Calenge F, Gaudon V, Koprivova A, North KA, Kopriva S, Daniel-Vedele F (2007) Natural variation for sulfate content in Arabidopsis thaliana is highly controlled by APR2. Nat Genet 39, 896-900

Martinelli T, Whittaker A, Bochicchio A, Vazzana C, Suzuki A, Masclaux-Daubresse C (2007) Amino acid pattern and glutamate metabolism during dehydration stress in the 'resurrection' plant Sporobolus stapfianus: a comparison between desiccation-sensitive and desiccation-tolerant leaves. J Exp Bot 58, 3037-3046

Martinelli T, Whittaker A, Masclaux-Daubresse C, Farrant JM, Brilli F, Loreto F, Vazzana C (2007) Evidence for the presence of photorespiration in desiccation-sensitive leaves of the C4 'resurrection' plant Sporobolus stapfianus during dehydration stress. J Exp Bot 58, 3929-3939

Masclaux-Daubresse C, Purdy S, Lemaitre T, Pourtau N, Taconnat L, Renou JP, Wingler A (2007) Genetic variation suggests interaction between cold acclimation and metabolic regulation of leaf senescence. Plant Physiol 143, 434-446

Mouille G, Ralet MC, Cavelier C, Eland C, Effroy D, Hematy K, McCartney L, Truong HN, Gaudon V, Thibault JF, Marchant A, Hofte H (2007) Homogalacturonan synthesis in Arabidopsis thaliana requires a Golgi-localized protein with a putative methyltransferase domain. Plant J 50, 605-614

Orsel M, Chopin F, Leleu O, Smith SJ, Krapp A, Daniel-Vedele F, Miller AJ (2007) Nitrate signalling and the two component high affinity uptake system in Arabidopsis. Plant Signalling and behaviour 2, 260-262

Sormani R, Yao L, Menand B, Ennar N, Lecampion C, Meyer C, Robaglia C (2007) Saccharomyces cerevisiae FKBP12 binds Arabidopsis thaliana TOR and its expression in plants leads to rapamycin susceptibility. BMC Plant Biol 7, 26

Tavernier V, Cadiou S, Pageau K, Lauge R, Reisdorf-Cren M, Langin T, Masclaux-Daubresse C (2007) The plant nitrogen mobilization promoted by Colletotrichum lindemuthianum in Phaseolus leaves depends on fungus pathogenicity. J Exp Bot 58, 3351-3360

Wirth J, Chopin F, Santoni V, Viennois G, Tillard P, Krapp A, Lejay L, Daniel-Vedele F, Gojon A (2007) Regulation of root nitrate uptake at the NRT2.1 protein level in Arabidopsis thaliana. J Biol Chem 282, 23541-23552

A. M. Chèvre, K. Adamczyk, F. Eber, V. Huteau, O. Coriton, J.C. Letanneur, C. Laredo, E. Jenczewski et H. Monod (2007) Modelling gene flow between oilseed rape and wild radish. I. Evolution of chromosome structure. Theoretical & Applied Genetics. 114, 209-22.

Budar F, Berthomé R. (2007) Cytoplasmic male sterilities and mitochondrial gene mutations in land plants. Logan, D. C. Plant Mitochondria. Blackwell Publishing 31, 278-307.

Chelysheva L, Gendrot G, Vezon D, Doutriaux MP, Mercier R, Grelon M. (2007) Zip4/Spo22 is required for class I CO formation but not for synapsis completion in Arabidopsis thaliana.PLoS Genet 3(5), e83.

Délye, C. Menchari, Y. Guillemin, J.P. Matéjicek, A. Camilleri, C. Chauvel, B. (2007) Status of black grass (Alopecurus myosuroides) resistance to acetyl-coenzyme A carboxylase inhibitors in France. Weed Research 47, 95-105.

De Muyt A, Vezon D, Gendrot G, Gallois J.L, Stevens R, Grelon M. (2007) AtPRD1 is required for meiotic double strand break formation in Arabidopsis thaliana. Embo J 26(18) 41, 26-37.

Drouaud, J.Mercier, R.Chelysheva, L.Berard, A.Falque, M.Martin,O.Zanni,V.Brunel, D.Mezard,
(2007) C.Sex-specific crossover distributions and variations in interference level along Arabidopsis thaliana chromosome 4. PLoS Genet 36, e106.

Falque, M., R. Mercier, C. Mezard, D. de Vienne and O. C. Martin (2007) Patterns of recombination and MLH1 foci density along mouse chromosomes: modeling effects of interference and obligate chiasma. Genetics.

Foo, E., S. E. Morris, K. Parmenter, N. Young, H. Wang, A. Jones, C. Rameau, C. G. Turnbull and C. A. Beveridge (2007) Feedback regulation of xylem cytokinin content is conserved in pea and Arabidopsis. Plant Physiol 143(3), 1418-28.

Giancola, S., Y. Rao, S. Chaillou, S. Hiard, A. Martin-Canadell, G. Pelletier and F. Budar (2007) Cytoplasmic suppression of Ogura cytoplasmic male sterility in European natural populations of Raphanus raphanistrum. Theor Appl Genet 114, 1333-1343.

Granier F, Bouchez D. (2007) Mutant Libraries: a High-throughput Arabidopsis Reverse Genetics System. Morot-Gaudry J.F, Lea P, Briat J.F. Title: Functional Plant Genomics. Science Publishers 143-164.

Johnson X, Bouchez D. (2007) The model species, Arabidopsis thaliana. Morot-Gaudry J.F, Lea P, Briat J.F. Functional Plant Genomics. Science Publishers 385-396.


Lahmy S, Guilleminot J, Schmit A.C, Pelletier G, Chaboute M.E, Devic M.
(2007) QQT proteins colocalize with microtubules and are essential for early embryo development in Arabidopsis. Plant J 50(4), 615-26.


Loudet O., Saliba-Colombani V., Camilleri C., Calenge F., Gaudon V., Koprivova A., North K.A., Kopriva S., Daniel-Vedele F. (2007) Natural variation for sulfate content in Arabidopsis is highly controlled by APR2 . Nature Genetics 39, 896-900. (pdf)

Macquet A, Ralet M.C, Loudet O, Kronenberger J, Mouille G, Marion-Poll A, North H.M. (2007) A naturally occurring mutation in an Arabidopsis accession affects a beta-D-galactosidase that increases the hydrophilic potential of rhamnogalacturonan I in seed mucilage. Plant Cell 19(12), 3990-4006.

Mazier, M.Botton, E.Flamain, F.Bouchet, J. P.Courtial,B.Chupeau,M.C.Chupeau, Y.Maisonneuve, B.Lucas, H.(2007) Successful gene tagging in lettuce using the Tnt1 retrotransposon from tobacco. Plant Physiol 144, 18-31.

Nicaise, V., J. L. Gallois, F. Chafiai, L. M. Allen, V. Schurdi-Levraud, K. S. Browning, T. Candresse, C. Caranta, O. Le Gall and S. German-Retana (2007) Coordinated and selective recruitment of eIF4E and eIF4G factors for potyvirus infection in Arabidopsis thaliana. FEBS Lett 581(5), 1041-6.

Nicolas S, G. LeMignon, F. Eber, O. Coriton, H. Monod, V. Clouet, V. Huteau, A. Lostanlen, R. Delourme, B. Chalhoub, C. D. Ryder, A.-M. Chèvre et E. Jenczewski (2007) Homeologous recombination is responsible for most of the rearrangements that occur during meiosis of Brassica napus haploids. Genetics. 175, 487 503(StephGenetics2007. (pdf )

Pastuglia M, Bouchez D. (2007) Molecular encounters at microtubule ends in the plant cell cortex. Curr Opin Plant Biol 10(6), 557-63.

Pelletier G, Durand-Tardif M, Doré C. (2007) Evolution des pratiques de l'amélioration des plantes cultivées. Acta Bot. Gallica. 154(3), 353-362.

Pierre M, Traverso J.A, Boisson B, Domenichini S, Bouchez D, Giglione C, Meinnel T. (2007) N-myristoylation regulates the SnRK1 pathway in Arabidopsis. Plant Cell 19(9), 2804-21.


Prioul-Gervais, S., G. Deniot, E. M. Receveur, A. Frankewitz, M. Fourmann, C. Rameau, M. L. Pilet-Nayel and A. Baranger (2007) Candidate genes for quantitative resistance to Mycosphaerella pinodes in pea (Pisum sativum L.). Theor Appl Genet 114(6), 971-84.

Triques, K.Sturbois, B.Gallais, S.Dalmais, M.Chauvin, S.Clepet, C.Aubourg, S.Rameau, C.Caboche, M.Bendahmane, A.
(2007) Characterization of Arabidopsis thaliana mismatch specific endonucleases: application to mutation discovery by TILLING in pea. Plant J.

Trouiller, B.Charlot, F.Choinard, S.Schaefer, D. G.Nogue, F.(2007) Comparison of gene targeting efficiencies in two mosses suggests that it is a conserved feature of Bryophyte transformation. Biotechnol Lett 29, 1591-1598.

Vignard J , Siwiec T , Chelysheva L, Vrielynck N, Gonord F, Armstrong SJ, Schlögelhofer P, R Mercier.
(2007) The interplay of RecA-related proteins and the MND1-HOP2 complex during meiosis in Arabidopsis thaliana..PLoS Genet. 3(10), 1894-906.


2006

Adenot X, Elmayan T, Lauressergues D, Boutet S, Bouché N, Gasciolli V, Vaucheret H (2006) DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7. Curr Biol 16, 927-932 (PubMed)

Barrière Y, Denoue D, Briand M, Simon M, Jouanin L, Durand-Tardif M (2006) Genetic variations of cell wall digestibility related traits in floral stems of Arabidopsis thaliana accessions as a basis for the improvement of the feeding value in maize and forage plants. Theor Appl Genet 113, 163-175 (PubMed)

Belles-Boix E, Hamant O, Witiak S M, Morin H, Traas J, and Pautot V (2006) KNAT6: An Arabidopsis homeobox gene involved in meristem activity and organ separation. Plant Cell 18, 1900-1907 (PubMed)

Bouché N, Lauressergues D, Gasciolli V, Vaucheret H (2006) An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs. EMBO J 25, 3347-3356 (PubMed)

Da Costa M, Bach L, Landrieu I, Bellec Y, Catrice O, Brown S, De Veylder L, Lippens G, Inze D, Faure J-D (2006) Arabidopsis PASTICCINO2 Is an Antiphosphatase Involved in Regulation of Cyclin-Dependent Kinase A. Plant Cell 18, 1426-1437.(PubMed)

Eudes A, Pollet B, Sibout R, Do C-T, Séguin A, Lapierre C, Jouanin L (2006) Evidence for a role of AtCAD1 in lignification of elongating stems of Arabidopsis thaliana Planta 225, 23-39 (PubMed)

Germann S, Juul-Jensen T, Letarnec B, Gaudin V (2006) DamID, a new tool for studying plant chromatin profiling in vivo, and its use to identify putative LHP1 target loci. Plant J 48, 153-163 (PubMed)

Kopecny D, Tarkowski P, Majira A, Bouchez-Mahiout I, Nogué F, Lauriere M, Sandberg G, Laloue M, Houba-Hérin N (2006) Probing cytokinin homeostasis in Arabidopsis thaliana by constitutively overexpressing two forms of the maize cytokinin oxidase/dehydrogenase 1 gene. Plant Sci 171, 114-122

Minic Z, Jouanin L (2006) Plant glycoside hydrolases in cell wall polysaccharide degradation. Plant Physiol Biochem 44, 435-449 (PubMed)

Minic Z, Do C-T, Rihouey C, Morin H, Lerouge P, Jouanin L (2006) Purification, functional characterization, cloning, and identification of mutants of a seed specific arabinan hydrolase in Arabidopsis. J Exp Bot 57, 2339-2351 (PubMed)


Mouille G, Witucka-Wall H, Bruyant, M-P, Loudet O, Pelletier S, Rihouey C, Lerouxel O, Lerouge P, Höfte H, Pauly M (2006) QTL analysis of primary cell wall composition in Arabidopsis thaliana. Plant Physiol 141, 1035-44 (PubMed)

Mourrain P, van Blockland R, Kooter J, Vaucheret H (2006) A single transgene locus triggers both transcriptional and post-transcriptional silencing through double-stranded RNA production. Planta DOI 10.1007/s00425-006-0366-1

Muller R, Borghi L, Kwiatkowska D, Laufs P, Simon R (2006) Dynamic and compensatory responses of Arabidopsis shoot and floral meristems to CLV3 signaling Plant Cell 18, 1188-1198

Mulligan EA, Ferry N, Jouanin L, Walters KFA, Port GR, Gatehouse AMR (2006) Comparing the impact of conventional pesticide and use of a transgenic pest-resistant crop on the beneficial carabid beetle Pterostichus melanarius. Pest Manag Sci 62, 999-1012.

Nikovics K, Blein T, Peaucelle A, Ishida T, Morin H, Aida M, Laufs P (2006) The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis. Plant Cell 18, 2929-2945 (PubMed)

Pouteau S, Ferret V, Lefebvre D (2006) Comparison of environmental and mutational variation in flowering time in Arabidopsis. J Exp Bot 57, 4099-4109 (PubMed)

Rajagopalan R, Vaucheret H, Trejo J, Bartel DP (2006) A diverse and evolutionarily fluid set of miRNAs in Arabidopsis thaliana. Genes Dev 20, 3407-3425

de Reuille P B, Bohn-Courseau I, Ljung K, Morin H, Carraro N, Godin C, Traas J (2006) Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis Proc Natl Acad Sci USA 103, 1627-1632

Smyczynski C, Roudier F, Gissot L, Vaillant E, Grandjean O, Morin H, Masson T, Bellec Y, Geelen D, Faure JD (2006) The Arabidopsis immunophilin PASTICCINO1 targets a NAC–like transcription factor to the nucleus during the cell cycle. J Biol Chem 281, 25475–25484 (PubMed)

Sorin C, Negroni L, Balliau T, Corti H, Jacquemot MP, Daventure M, Sandberg G, Zivy M, Bellini C (2006) Proteomic analysis of different mutant genotypes of Arabidopsis thaliana led to the identification of eleven proteins correlating with adventitious root development. Plant Physiol 40, 349-364

Vaucheret H, Mallory AC, Bartel DP (2006) AGO1 homeostasis entails co-expression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1. Mol Cell 22, 129-136 (PubMed)


Buitink J, Leger JJ, Guisle I, Vu BL, Wuilleme S, Lamirault G, Le Bars A, Le Meur N, Becker A, Kuster H, Leprince O. (2006) Transcriptome profiling uncovers metabolic and regulatory processes occurring during the transition from desiccation-sensitive to desiccation-tolerant stages in Medicago truncatula seeds. Plant J, 47, 735-50 (PubMed)

Baudry A, Caboche M, Lepiniec L (2006) TT8 controls its own expression in a feedback regulation involving TTG1 and homologous MYB and bHLH factors, allowing a strong and cell-specific accumulation of flavonoids in Arabidopsis thaliana. Plant J, 46, 768-779 (PubMed)

Chibani K, Ali-Rachedi S, Job C, Job D, Jullien M, Grappin P. (2006) Proteomic analysis of seed dormancy in Arabidopsis. Plant Physiol. 142, 1493-1510 (PubMed)

de Diego JG, David Rodríguez F, Rodríguez Lorenzo JL, Grappin P, Cervantes E. (2006) cDNA-AFLP analysis of seed germination in Arabidopsis thaliana identifies transposons and new genomic sequences. J Plant Physiol. 16, 452-62 (PubMed)

Frey A, Boutin JP, Sotta B, Mercier R, Marion-Poll A (2006) Regulation of carotenoid and ABA accumulation during the development and germination of Nicotiana plumbaginifolia seeds. Planta, 224, 622-632 (PubMed)

Lefebvre V, North H, Frey A, Sotta A, Seo M, Okamoto M, Nambara E, Marion-Poll A (2006) Functional analysis of Arabidopsis NCED6 and NCED9 genes indicates that ABA synthesised in the endosperm is involved in the induction of seed dormancy. Plant J, 45, 309-319 (PubMed)

Marion-Poll A, North H, Lessard P, Redondo E (2006) Identification of proteins useful for improving plant tolerance water deficit (ABA4). European patent EP 06290983

Kerhoas L, Aouak D, Cingöz A, Birlirakis N, Routaboul JM, Lepiniec L, Einhorn J (2006) Structural characterization of the major flavonoid glycosides from Arabidopsis thaliana seeds, Agric. Food. Biochem. (PubMed)

Routaboul JM, Kerhoas L, Debeaujon I, Pourcel L, Caboche M, Einhorn J, Lepiniec L (2006) Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana. Planta, 224, 96-107 (PubMed)

Seo S, Hanada A, Kuwahara A, Endo A, Okamoto M, Yamauchi Y, North H, Marion-Poll A, Sun TP, Koshiba T, Kamiya Y, Yamaguchi S, Nambara E (2006) Regulation of hormone metabolism in Arabidopsis seeds: Phytochrome regulation of abscisic acid metabolism and abscisic acid regulation of gibberellin metabolism. Plant J. 48, 354-366 (PubMed)

Tamura N, Yoshida T, Tanaka A, Rsasaki R, Bando A, Toh S, Lepiniec L, Kawakami N (2006) Isolation and characterization of high temperature resistant germination mutants of Arabidopsis thaliana. Plant Cell Physiol. 47, 1081-1094 (PubMed)

Calenge F, Saliba-Colombani V, Mahieu S, Loudet O, Daniel-Vedele F, Krapp A (2006) Natural variation for carbohydrate content in Arabidopsis. Interaction with complex traits dissected by quantitative genetics. Plant Physiol 141: 1630-1643

Chaffei C, Suzuki A, Masclaux-Daubresse C, Ghorbel MH, Gouia H (2006) [Implication of glutamate, isocitrate and malate deshydrogenases in nitrogen assimilation in the cadmium-stressed tomato]. C R Biol 329: 790-803

Debouba M, Gouia H, Suzuki A, Ghorbel MH (2006) NaCl stress effects on enzymes involved in nitrogen assimilation pathway in tomato "Lycopersicon esculentum" seedlings. J Plant Physiol 163: 1247-1258

Debouba M, Gouia H, Valadier MH, Ghorbel MH, Suzuki A (2006) Salinity-induced tissue-specific diurnal changes in nitrogen assimilatory enzymes in tomato seedlings grown under high or low nitrate medium. Plant Physiol Biochem 44: 409-419

Diaz C, Saliba-Colombani V, Loudet O, Belluomo P, Moreau L, Daniel-Vedele F, Morot-Gaudry JF, Masclaux-Daubresse C (2006) Leaf yellowing and anthocyanin accumulation are two genetically independent strategies in response to nitrogen limitation in Arabidopsis thaliana. Plant Cell Physiol 47: 74-83

Fei H, Chaillou S, Hirel B, Polowick P, Mahon JD, Vessey JK (2006) Effects of the overexpression of a soybean cytosolic glutamine synthetase gene (GS15) linked to organ-specific promoters on growth and nitrogen accumulation of pea plants supplied with ammonium. Plant Physiol Biochem 44: 543-550

Ferrario-Mery S, Besin E, Pichon O, Meyer C, Hodges M (2006) The regulatory PII protein controls arginine biosynthesis in Arabidopsis. FEBS Lett 580: 2015-2020

Fontaine JX, Saladino F, Agrimonti C, Bedu M, Terce-Laforgue T, Tetu T, Hirel B, Restivo FM, Dubois F (2006) Control of the synthesis and subcellular targeting of the two GDH genes products in leaves and stems of Nicotiana plumbaginifolia and Arabidopsis thaliana. Plant Cell Physiol 47: 410-418

Gallais A, Coque M, Quillere I, Prioul JL, Hirel B (2006) Modelling postsilking nitrogen fluxes in maize (Zea mays) using 15N-labelling field experiments. New Phytol 172: 696-707

Hirel B, Gallais A (2006) Rubisco synthesis, turnover and degradation: some new thoughts on an old problem. New Phytol 169: 445-448

Kichey T, Heumez E, Pocholle D, Pageau K, Vanacker H, Dubois F, Le Gouis J, Hirel B (2006) Combined agronomic and physiological aspects of nitrogen management in wheat highlight a central role for glutamine synthetase. New Phytol 169: 265-278

Lea US, Leydecker MT, Quillere I, Meyer C, Lillo C (2006) Posttranslational regulation of nitrate reductase strongly affects the levels of free amino acids and nitrate, whereas transcriptional regulation has only minor influence. Plant Physiol 140: 1085-1094

Martin A, Lee J, Kichey T, Gerentes D, Zivy M, Tatout C, Dubois F, Balliau T, Valot B, Davanture M, Terce-Laforgue T, Quillere I, Coque M, Gallais A, Gonzalez-Moro MB, Bethencourt L, Habash DZ, Lea PJ, Charcosset A, Perez P, Murigneux A, Sakakibara H, Edwards KJ, Hirel B (2006) Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production. Plant Cell 18: 3252-3274

Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A (2006) Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco. Plant Physiol 140: 444-456

Orsel M, Chopin F, Leleu O, Smith SJ, Krapp A, Daniel-Vedele F, Miller AJ (2006) Characterization of a two-component high-affinity nitrate uptake system in Arabidopsis. Physiology and protein-protein interaction. Plant Physiol 142: 1304-1317

Pageau K, Reisdorf-Cren M, Morot-Gaudry JF, Masclaux-Daubresse C (2006) The two senescence-related markers, GS1 (cytosolic glutamine synthetase) and GDH (glutamate dehydrogenase), involved in nitrogen mobilization, are differentially regulated during pathogen attack and by stress hormones and reactive oxygen species in Nicotiana tabacum L. leaves. J Exp Bot 57: 547-557

Pommel B, Gallais A, Coque M, Quillere I, Hirel B, Prioul JL, Andrieu B, Floriot M (2006) Carbon and nitrogen allocation and grain filling in three maize hybrids differing in leaf senescence. European Journal of Agronomy 24: 203-211

Schjoerring JK, Mack G, Nielsen KH, Husted S, Suzuki A, Driscoll S, Boldt R, Bauwe H (2006) Antisense reduction of serine hydroxymethyltransferase results in diurnal displacement of NH4+ assimilation in leaves of Solanum tuberosum. Plant J 45: 71-82

Adenot X, Elmayan T, Lauressergues D, Boutet S, Bouché N, Gasciolli V et Vaucheret H.(2006) Uncoupled production of ta-siRNAs in hypomorphic rdr6 and sgs3 mutants uncovers a role for TAS3 in AGO7- DCL4-DRB4-mediated control of leaf morphology, Current
Biology 16: 927-932.

Arnal N, Quadrado M. and Mireau H. (2006) The Arabidopsis Bio2 protein requires mitochondrial targeting to be active. Plant Mol Biol. 62(3):471-9.

Aubert G, Morin J, Jacquin F, Loridon K, Quillet M.C, Petit A, Rameau C, Lejeune-Henaut I, Huguet T, Burstin J. (2006) Functional mapping in pea, as an aid to the candidate gene selection and for investigating synteny with the model legume Medicago truncatula. Theor Appl Genet 112(6) 1024-41.

Barriere Y, Denoue D, Briand M, Simon M, Jouanin L, Durand-Tardif M. (2006) Genetic variations of cell wall digestibility related traits in floral stems of Arabidopsis thaliana accessions as a basis for the improvement of the feeding value in maize and forage plants. Theoretical and Applied Genetics. 113(1) 163-175.

Bouché N, Lauressergues D, Gasciolli V et Vaucheret H. (2006) An antagonistic function for Arabidopsis DCL2 in development and a new
function for DCL4 in generating viral siRNAs. The EMBO Journal, 26;25(14) 3347-3356.

Calenge F., Saliba-Colombani V., Mahieu S., Loudet O., Daniel-Vedele F., Krapp A. (2006) Natural variation for carbohydrate content in Arabidopsis thaliana: interaction with complex traits dissected by quantitative genetics. Plant Physiology June 23 Epub. PDF

Diaz C., Saliba-Colombani V., Loudet O., Belluomo P., Moreau L., Daniel-Vedele F., Morot-Gaudry J.-F., Masclaux-Daubresse C. (2006) Leaf yellowing and anthocyanin accumulation are two genetically independent strategies in response to nitrogen limitation in Arabidopsis thaliana. Plant and Cell Physiology 47: 74-83 6 -PDF

Drouaud J, Camilleri C, Bourguignon PY, Canaguier A, Berard A, Vezon D, Giancola S, Brunel D, Colot V, Prum B, Quesneville H ,Mezard C.(2006) Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination "hot spots". Genome Res 16:106-114.

Duroc, Y, Gaillard, C., Hiard, S., Tinchant, C, Berthomé, R, Pelletier, G and Budar, F (2006) « Nuclear expression of a cytoplasmic male sterility gene modifies mitochondrial morphology in yeast and plant cells. » Plant Science 170 :755-767. (pdf -intranet uniquement)

Frédéric Sapet, Erik Kimmel, Fabienne Granier, Delphine Steinbach-Samson, Nicolas Grimault, Farid Chétouani, Delphine Grando, Jean-Baptiste Guidier, Frédéric Potier, C Pommier, François Artiguenave and Dominique Brunel. (2006) GnpSNP : a database for storing polymorphism data JOBIM : Journées Ouvertes Biologie, Informatique, Mathématiques, Bordeaux, 5-7 juillet 2006 (poster). PDF (intranet)

Giancola S, McKhann H, Bérard A, Camilleri C, Durand S, Libeau P, Roux F, Reboud X, Gut IG and Brunel D (2006) Utilization of the three high-throughput SNP genotyping methods, the GOOD assay, Amplifluor and TaqMan, in diploid and polyploid plants. Theor Appl Genet 2 ; 1-10.

Johnson X, Brcich T, Dun E.A, Goussot M, Haurogne K, Beveridge C.A, Rameau C. (2006) Branching genes are conserved across species. Genes controlling a novel signal in pea are coregulated by other long-distance signals. Plant Physiol 142(3) 1014-26.

Jolivet S, Vezon D, Froger N ,Mercier R. ((2006)) Non conservation of the meiotic function of the Ski8/Rec103 homolog in Arabidopsis. Genes Cells 11:615-622.

Kerzendorfer C, Vignard J, Pedrosa-Harand A, Siwiec T, Akimcheva S, Jolivet S, Sablowski R, Armstrong S, Schweizer D, Mercier R ,Schlogelhofer P. (2006) The Arabidopsis thaliana MND1 homologue plays a key role in meiotic homologous pairing, synapsis and recombination. J Cell Sci 119:2486-2496.

Kliebenstein D.J., West M.A.L., van Leeuwen H., Loudet O., Doerge R.W., St.Clair D.A. (2006) Identification of QTLs controlling gene expression networks defined a priori. BMC Bioinformatics June 16 Epub. PDF

Kopecny D, Tarkowski P, Majira A, Bouchez-Mahiout I, Nogue F, Laurière M, Sandberg G, Laloue M ,Houba-Herin N. (2006) Probing cytokinin homeostasis in Arabidopsis thaliana by constitutively overexpressing two forms of the maize cytokinin oxidase/dehydrogenase 1 gene. Plant Science 171:114-122.

Leflon M, F. Eber, J.C. Letanneur, L. Chelysheva, O. Coriton, V. Huteau, B. Chalhoub, R. Delourme, C. D. Ryder, G Barker, E. Jenczewski and A.M. Chèvre (2006) Pairing and recombination at meiosis of Brassica rapa (AA) x Brassica napus (AACC) hybrids. Theoretical and Applied Genetics 113(8):1467-80. (pdf)

Liu Z, Adamczyk K, Manzanares-Dauleux M, Eber F, Lucas M.O, Delourme R, Chevre A.M, Jenczewski E. (2006) Mapping PrBn and other quantitative trait loci responsible for the control of homeologous chromosome pairing in oilseed rape (Brassica napus L.) haploids. Genetics 174(3) 1583-96.

Menchari Y, Camilleri C, Michel S, Brunel D, Dessaint F, Le Corre V, Délye C. (2006) Weed response to herbicides: regional-scale distribution of herbicide resistance alleles in the grass weed Alopecurus myosuroides Huds. New Phytologist 171 861-874.

Mouille G., Witucka-Wall H., Bruyant M.P., Loudet O., Rihouey C., Lerouxel O., Lerouge P., Hofte H., Pauly M. (2006) QTL analysis of primary cell wall composition in Arabidopsis thaliana. Plant Physiology 141: 1035-1044 - PDF

Ostrowski MF, David J, Santoni S, McKhann H, Reboud X, Le Corre V, Camilleri C, Brunel D, Bouchez D, Faure B and Bataillon T (2006). Evidence for a large-scale population structure among accessions of Arabidopsis thaliana : possible causes and consequences for the distribution of linkage disequilibrium. Molecular Ecology 15(6) ; 1507-17.

Pastuglia M, Azimzadeh J, Goussot M, Camilleri C, Belcram K, Evrard JL, Schmit AC, Guerche P and Bouchez D.(2006) Gamma-tubulin is essential for microtubule organization and development in Arabidopsis. Plant Cell 18:1412-1425 (pdf)

Perchepied L., Kroj T., Tronchet M., Loudet O., Roby D. (2006) Natural variation in partial resistance to Pseudomonas syringae is controlled by two major QTLs in Arabidopsis thaliana. PLoS ONE 1(1): e123 Paper eLink - PDF

Prosperi JM, Jenczewski E, Angevain M, Rnfort Jo.(2006) Morphologic and agronomic diversity of wild genetic resources of Medicago sativa L. collected in Spain. Genetic Resources and Crop Evolution 53: 843-856, .

Reymond M., Svistoonoff S., Loudet O., Nussaume L., Desnos T. (2006) dentification of QTL controlling root growth response to phosphate starvation in Arabidopsis thaliana. Plant, Cell and Environment 29:115-125 - PDF

Trouiller B, Schaefer DG, Charlot F ,Nogue F.(2006) MSH2 is essential for the preservation of genome integrity and prevents homeologous recombination in the moss Physcomitrella patens. Nucleic Acids Res 34:232-242.

Y. Barrière, D. Denoue, M. Briand, M. Simon, L. Jouanin and M. Durand-Tardif (2006),Genetic variation for cell walldigestibility related traits in floral stems of A. thaliana accessions as a basis for the improvement of the feeding value in maize and forage plants, Theor. Appl. Genet. 113:163-175 - PDF

Z. Liu, K. Adamczyk, M. Manzanares-Dauleux, F. Eber, M.-O. Lucas, R. Delourme, A.-M. Chèvre et E. Jenczewski (2006) Mapping PrBn and Other Quantitative Trait Loci Responsible for the Control of Homoeologous Chromosome Pairing in Oilseed Rape (Brassica napus L.) Haploids. Genetics. 174(3):1583-96 (LiuGenetics2006. (pdf)



Synthèses scientifiques :

2013
Dahan J, Mireau H (2013) Rf and Rf-like PPRs in higher plants, an intriguing subclass of PPR proteins. RNA Biology, 10(9)..


2012


2011
Budar, F. & Roux, F., 2011. The role of organelle genomes in plant adaptation: Time to get to work! Plant signaling & behavior, 6(5), Pp. 635–639

.

2010

Dinant S, Bonnemain JL, Girousse C, Kehr J (2010) Phloem sap intricacy and interplay with aphid feeding. Comptes Rendus biologie. 333: 504-515.

Dinant S, Lemoine R (2010) The phloem pathway: new issues and old debates. Comptes Rendus biologie. 333: 307-319.

Giordanengo P, Brunissen L, Rusterucci1 C, Vincent C, van Bel A, Dinant S, Girousse C, Faucher M, Bonnemain JL (2010) Compatible plant-aphid interactions: How aphids manipulate plant responses. Comptes Rendus biologie. 333: 516-523.

 

 

2009
De Muyt A, Mercier R, Mézard C, Grelon M (2009) Meiotic recombination and crossovers in plants. Genome dynamics 5: 14–25

 

2008

Dinant S., (2008) Phloème, transport interorgane et signalisation à longue distance. Comptes Rendus Biologie. Sous presse

Le Hir R., Béneteau J., Bellini C., Vilaine F., Dinant S. (2008) Transcriptomics data: keys for investigating phloem functions. Trends in plant science. Sous presse

Mercier R, Grelon M (2008) Meiosis in plants: ten years of gene discovery. Cytogenetic and genome research 120: 281–90

Baud S, Dubreucq B, Miquel M, Rochat C, Lepiniec L (2008) Storage reserve accumulation in Arabidopsis: Metabolic and developmental control of seed filling. In The Arabidopsis book, American Society of Plant Piologists (ed.), USA (in press)

Holdsworth MJ, Finch-Savage WE, Grappin P, Job D (2008) Post-genomics dissection of seed dormancy and germination. Trends Plant Sci 13, 7-13 (PubMed)

 


2007

Alpi A, Amrhein N, Bertl A, Blatt MR, Blumwald E, Cervone F, Dainty J, De Michelis MI, Epstein E, Galston AW, Goldsmith MH, Hawes C, Hell R, Hetherington A, Höfte H, Juergens G, Leaver CJ, Moroni A, Murphy A, Oparka K, Perata P, Quader H, Rausch T, Ritzenthaler C, Rivetta A, Robinson DG, Sanders D, Scheres B, Schumacher K, Sentenac H, Slayman CL, Soave C, Somerville C, Taiz L, Thiel G, Wagner R. (2007) Plant neurobiology, no brain no gain. Trends in Plant Science, 12, 135-6. (PubMed)

Emons, A-MC., Höfte, H., Mulder, BM. (2007) Microtubules and Cellulose Microfibrills, how intimate is their relation? Trends in Plant Science, 12, 279-81. (PubMed)

Pelletier, G. and F. Budar (2007) The molecular biology of cytoplasmically inherited male sterility and prospects for its engineering. Curr Opin Biotechnol 18(2): 121-125.

Mezard, C., J. Vignard, J. Drouaud and R. Mercier (2007) The road to crossovers: plants have their say. Trends Genet 23(2): 91-9.

 


2006

Carraro N, Peaucelle A, Laufs P, Traas J (2006) Cell differentiation and organ initiation at the shoot apical meristem Plant Mol Biol 60, 811-826 (PubMed)

Johansen JN, Vernhettes S, Höfte H (2006) The ins and outs of plant cell walls. Curr Opin Plant Biol 9, 1616-1620 (PubMed)

Peaucelle A, Laufs P (2006) Des Casques Bleus chez les plantes : Un microARN, miR164, stabilise les frontières dans le méristème. Médecine et Sciences, 22, 796-798 (PubMed)

Mallory AC, Vaucheret H (2006) Functions of plant microRNAs and related small RNAs. Nat Gen 38, S31-S36 (PubMed)

Vaucheret (2006) Posttranscriptional small RNA pathways in plants: mechanisms and regulations. Genes Dev 20, 759-771 (PubMed)

Lepiniec L, Debeaujon I, Routaboul JM, Baudry A, Pourcel L, Nesi N, Caboche M (2006) Genetics and Biochemistry of Seed Flavonoids. Annu Rev Plant Biol 57, 405-430 (PubMed) F

Marion-Poll A, Leung J (2006) Abscisic acid synthesis, metabolism and signal transduction. In Plant Hormone signaling, Annual Plant Reviews, P Hedden & SG Thomas eds, Blackwell Publishing, Oxford, UK, pp 1-35

Bouchez D, Bendahmane A, Lurin C, Sturbois B (2006). Nouvelles approches génétiques chez les plantes. Biofutur n°265 (avril 2006) 38-44

Budar F, Touzet P & Pelletier G (2006) "Cytoplasmic male sterility" In Flowering and its manipulation. Annual Plant Reviews, vol 20 (C. Ainsworth Ed) Blackwell Publishing.

Guermonprez H, Nogué F, Bonhomme S (2006) Screening and Analysis of Pollen Tube Mutations. In: The Pollen Tube-A Cellular and Molecular Perspective Rui Malhó .(Ed)-Springer Verlag.

Lurin C, Renou JP, Bouchez D (2006). La génomique et les outils d'exploration fonctionnelle chez les plantes. Biofutur n°265 (avril 2006) : 45-49.

Mezard C. (2006) Meiotic recombination hotspots in plants. Biochem Soc Trans 34 Pt 4 531-4 Aug 0300-5127 (Print).



Chapitres d’ouvrages :

2013

Chelysheva L, Grandont L, Grelon M (2013) Immunolocalization of meiotic proteins in Brassicacae – method 1 in  Plant Meiosis (eds : Pawlowski W Grelon M and Armstrong S). Series: Methods in Molecular Biology (Series Editor: John M. Walker) 990:93-101.

Mézard C, Macaisne N, Grelon M (2013) La Méiose in La Reproduction Animale et Humaine. Editions Quae _ Éditions Cemagref, Cirad, Ifremer, Inra. In press

 

2012

Budar, F. & Fujii, S., 2012. Cytonuclear Adaptation in Plants. In L. Marechal-Drouard, ed. Mitochondrial Genome Evolution, Advances in Botanical Research Volume 63. Elsevier, Pp. 99–126.

 

2011

Germann, S., and Gaudin, V. (2011). Mapping in vivo protein-DNA interactions in plants by DamID, a DNA adenine methylation-based method. In Plant Transcription Factors: Methods and Protocols, L. Yuan and S.E. Perry, eds (New York, USA: SPRINGER SCIENCE+BUSINESS MEDIA, LLC), pp. 307-321.

Jauvion, V., Mallory, A.C., and Vaucheret, H. (2011) Deciphering post-transcriptional gene silencing pathways through genetic screens. In RNAi technology. Gaur, R.K., Gafni, Y., Sharma, P., and Gupta, V.K. editors, CRC press. Science publishers, p17-46


2010


2009

De Muyt A, Mercier R, Mézard C, Grelon M (2009) Meiotic Recombination and Crossovers in Plants. Benavente R, Volff J-N (eds): Meiosis. Genome Dyn. Basel, Karger, vol 5, pp 14–25

2008

Grandbastien M-A (2008) Retrotransposons of plants, In "Encyclopedia of Virology, Third Edition, 5 vols", Editors B.W.J. Mahy and M.H.V. Van Regenmortel, Elsevier, Oxford (UK), pp 428-436

Baud S, Dubreucq B, Miquel M, Rochat C, Lepiniec L (2008) Storage reserve accumulation in Arabidopsis: Metabolic and developmental control of seed filling. In The Arabidopsis book, American Society of Plant Physiologists (ed.), USA (in press)


2007

A. Krapp, J.F. Morot-Gaudry, S. Boutet G. Bergot,C Lelarge, JL Prioul, G (2007) Noctor. Metabolomics. In Functional Plant Genomics. Ed JF Morot-Gaudry, PJ Lea, JF Briat, Science Publishers, Inc., Enfield (NH),USA, Plymouth, UK, 311-333.

Johnson X., Bouchez D (2007) The Model Species, Arabidopsis thaliana. In. fonctional plant genomic. JF Briat & JF Morot-Gaudry, Eds. SCIENCE PUBLISHERS USA.

Budar F, Berthomé R (2007) Cytoplasmic male sterilities and mitochondrial gene mutations in plants In Plant mitochondria, Annual Plant Reviews (D. Logan Ed) Blackwell Publishing pp278-307.


2006

Hématy K, Höfte H (2006) Cellulose and Cell Elongation. Plant Cell Monographs, Verbelen JP and Vissenberg K. eds.

Debeaujon I, Lepiniec L, Pourcel L, Routaboul JM (2006) Seed coat development and dormancy. In Seed Development, Dormancy and Germination, Bradford K, Nonogaki H (eds), Blackwell Publishing., Oxford, UK pp 25-49

Marion-Poll A, Leung J (2006) Abscisic acid synthesis, metabolism and signal transduction. In Plant Hormone signaling, Annual Plant Reviews, Hedden P, Thomas SG (eds) Blackwell Publishing, Oxford, UK, pp 1-35

Quattrocchio F, Baudry A, Lepiniec L, Grotewold E (2006) The regulation of flavonoid biosynthesis. In The Science of Flavonoids, Grotewold E (ed.), Springer, pp 97-122

Hirel B, Lemaire G (2006) From agronomy and ecophysiology to molecular genetics for improving nitrogen use efficiency in crops. In RT A Basra, S Goyal Eds, ed, Enhancing the efficiency of nitrogen fertilization in plants. Haworth’s Food Product Press Binghamton, NY pp 213-257

Mouille G, Lapierre C, Jouanin L, Job D, Morot-Gaudry JF (2006) Manipulation des voies de synthèse des synthons dédiés à la chimie verte. In PC Ed., ed, La Chimie Verte. Lavoisier, pp 41-78

Budar F, Touzet P & Pelletier G (2006) "Cytoplasmic male sterility" In Flowering and its manipulation, Annual Plant Reviews, vol 20 (C. Ainsworth Ed) Blackwell Publishing." dans les chapitres d'ouvrage.



Ouvrages entiers:


Pawlowski, W.P.; Grelon, M; Armstrong, S (Eds.) 2013,Plant Meiosis, Methods and Protocols, Series: Methods in Molecular Biology, Vol. 990 XV, 238 p. 52 illus., 28 illus. in color. Humana Press

J. Farineau et J.F. Morot-Gaudry (2006) Photosynthèse. Eds.INRA-Editions, 403 p ; ISBN 2-7380-1209-4

Functional Plant Genomics (2007).Ed JF Morot-Gaudry, PJ Lea, JF Briat, Science Publishers, Inc., Enfield (NH),USA, Plymouth, UK, 700p, ISBN 2-7380-1167-5

Samouélian, F., Gaudin, V., and Boccara, M. (2009). Génétique moléculaire des plantes. Editions Quae, p.208.


 

 


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