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Publications scientifiques

2015 - 2014 - 2013 - 2012 - 2011 - années antérieures
Mise en surbrillance des mots recherchés:

2015

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Adler, S., Noirot, M., Fock-Bastide, I., Citerne, S., and Mouille, G. (2015). Variations in cell wall monosaccharide composition during seed development in Coffea arabica L. Comparison between Coffea arabica var. Bourbon and Coffea arabica var. Laurina. Trees-Struct. Funct. 29, 1871-1881.

Aguie-Beghin, V., Foulon, L., Soto, P., Cronier, D., Corti, E., Legee, F., Cezard, L., Chabbert, B., Maillard, M.N., Huijgen, W.J.J., and Baumberger, S. (2015). Use of Food and Packaging Model Matrices to Investigate the Antioxidant Properties of Biorefinery Grass Lignins. Journal of agricultural and food chemistry 63, 10022-10031.

Anne, P., Azzopardi, M., Gissot, L., Beaubiat, S., Hematy, K., and Palauqui, J.C. (2015). OCTOPUS Negatively Regulates BIN2 to Control Phloem Differentiation in Arabidopsis thaliana. Current biology : CB 25, 2584-2590.

Arganda-Carreras, I., Turaga, S.C., Berger, D.R., Ciresan, D., Giusti, A., Gambardella, L.M., Schmidhuber, J., Laptev, D., Dwivedi, S., Buhmann, J.M., Liu, T., Seyedhosseini, M., Tasdizen, T., Kamentsky, L., Burget, R., Uher, V., Tan, X., Sun, C., Pham, T.D., Bas, E., Uzunbas, M.G., Cardona, A., Schindelin, J., and Seung, H.S. (2015). Crowdsourcing the creation of image segmentation algorithms for connectomics. Frontiers in neuroanatomy 9, 142.

Ayme, L., Jolivet, P., Nicaud, J.M., and Chardot, T. (2015). Molecular Characterization of the Elaeis guineensis Medium-Chain Fatty Acid Diacylglycerol Acyltransferase DGAT1-1 by Heterologous Expression in Yarrowia lipolytica. PloS one 10, e0143113.

Aznar, A., and Dellagi, A. (2015). New insights into the role of siderophores as triggers of plant immunity: what can we learn from animals? Journal of experimental botany 66, 3001-3010.

Aznar, A., Patrit, O., Berger, A., and Dellagi, A. (2015). Alterations of iron distribution in Arabidopsis tissues infected by Dickeya dadantii. Molecular plant pathology 16, 521-528.

Aznar, A., Chen, N.W., Thomine, S., and Dellagi, A. (2015). Immunity to plant pathogens and iron homeostasis. Plant science : an international journal of experimental plant biology 240, 90-97.

Barbara, I., Flourat, A.L., and Allais, F. (2015). Renewable polymers derived from ferulic acid and biobased diols via ADMET. Eur. Polym. J. 62, 236-243.

Barbier, F., Peron, T., Lecerf, M., Perez-Garcia, M.D., Barriere, Q., Rolcik, J., Boutet-Mercey, S., Citerne, S., Lemoine, R., Porcheron, B., Roman, H., Leduc, N., Le Gourrierec, J., Bertheloot, J., and Sakr, S. (2015). Sucrose is an early modulator of the key hormonal mechanisms controlling bud outgrowth in Rosa hybrida. Journal of experimental botany 66, 2569-2582.

Bastien, R., Douady, S., and Moulia, B. (2015). A unified model of shoot tropism in plants: photo-, gravi- and Propio-ception. PLoS computational biology 11, e1004037.

Bensussan, M., Lefebvre, V., Ducamp, A., Trouverie, J., Gineau, E., Fortabat, M.N., Guillebaux, A., Baldy, A., Naquin, D., Herbette, S., Lapierre, C., Mouille, G., Horlow, C., and Durand-Tardif, M. (2015). Suppression of Dwarf and irregular xylem Phenotypes Generates Low-Acetylated Biomass Lines in Arabidopsis. Plant physiology 168, 452-463.

Boucher, D., Vu, T., Bain, A.L., Tagliaro-Jahns, M., Shi, W., Lane, S.W., and Khanna, K.K. (2015). Ssb2/Nabp1 is dispensable for thymic maturation, male fertility, and DNA repair in mice. FASEB journal : official publication of the Federation of American Societies for Experimental Biology 29, 3326-3334.

Bouchez, I., Pouteaux, M., Canonge, M., Genet, M., Chardot, T., Guillot, A., and Froissard, M. (2015). Regulation of lipid droplet dynamics in Saccharomyces cerevisiae depends on the Rab7-like Ypt7p, HOPS complex and V1-ATPase. Biology open 4, 764-775.

Boulard, C., Bardet, M., Chardot, T., Dubreucq, B., Gromova, M., Guillermo, A., Miquel, M., Nesi, N., Yen-Nicolay, S., and Jolivet, P. (2015). The structural organization of seed oil bodies could explain the contrasted oil extractability observed in two rapeseed genotypes. Planta 242, 53-68.

Burge, G., Flourat, A.L., Pollet, B., Spinnler, H.E., and Allais, F. (2015). 3-Hydroxypropionaldehyde (3-HPA) quantification by HPLC using a synthetic acrolein-free 3-hydroxypropionaldehyde system as analytical standard. Rsc Advances 5, 92619-92627.

Burge, G., Saulou-Berion, C., Moussa, M., Pollet, B., Flourat, A., Allais, F., Athes, V., and Spinnler, H.E. (2015). Diversity of Lactobacillus reuteri Strains in Converting Glycerol into 3-Hydroxypropionic Acid. Applied biochemistry and biotechnology 177, 923-939.

Cabrera, J., Diaz-Manzano, F.E., Barcala, M., Arganda-Carreras, I., de Almeida-Engler, J., Engler, G., Fenoll, C., and Escobar, C.
(2015). Phenotyping nematode feeding sites: three-dimensional reconstruction and volumetric measurements of giant cells induced by root-knot nematodes in Arabidopsis. New Phytologist 206, 868-880.

Casacuberta, J.M., Devos, Y., du Jardin, P., Ramon, M., Vaucheret, H., and Nogue, F. (2015). Biotechnological uses of RNAi in plants: risk assessment considerations. Trends in biotechnology 33, 145-147.

Cayla, T., Batailler, B., Le Hir, R., Revers, F., Anstead, J.A., Thompson, G.A., Grandjean, O., and Dinant, S. (2015). Live imaging of companion cells and sieve elements in Arabidopsis leaves. PloS one 10, e0118122.

Cottyn, B., Rivard, M., Majira, A., Beauhaire, J., Allais, F., Martens, T., Baumberger, S., and Ducrot, P.H. (2015). Comparative electrochemical study on monolignols and dimers relevant for the comprehension of the lignification process. Phytochem. Lett. 13, 280-285.

Coursol, S., Fromentin, J., Noirot, E., Brière, C., Robert, F., Morel, J., Liang, Y.-K., Lherminier, J., and Simon-Plas, F.
(2015). Long-chain bases and their phosphorylated derivatives differentially regulate cryptogein-induced production of reactive oxygen species in tobacco (Nicotiana tabacum) BY-2 cells. New Phytologist 205, 1239-1249.

de Carbon, C.B., Thurotte, A., Wilson, A., Perreau, F., and Kirilovsky, D. (2015). Biosynthesis of soluble carotenoid holoproteins in Escherichia coli. Scientific reports 5, 9085.

De Cuyper, C., Fromentin, J., Yocgo, R.E., De Keyser, A., Guillotin, B., Kunert, K., Boyer, F.D., and Goormachtig, S. (2015). From lateral root density to nodule number, the strigolactone analogue GR24 shapes the root architecture of Medicago truncatula. Journal of experimental botany 66, 137-146.

de Klein, N., Magnani, E., Banf, M., and Rhee, S.Y. (2015). microProtein Prediction Program (miP3): A Software for Predicting microProteins and Their Target Transcription Factors. International journal of genomics 2015: http://dx.doi.org/10.1155/2015/734147.

Del Prete, S., Mikulski, P., Schubert, D., and Gaudin, V. (2015). One, Two, Three: Polycomb Proteins Hit All Dimensions of Gene Regulation. Genes 6, 520-542.

Deruyffelaere, C., Bouchez, I., Morin, H., Guillot, A., Miquel, M., Froissard, M., Chardot, T., and D'Andrea, S.
(2015). Ubiquitin-Mediated Proteasomal Degradation of Oleosins is Involved in Oil Body Mobilization During Post-Germinative Seedling Growth in Arabidopsis. Plant & cell physiology 56, 1374-1387.

Dobrovolskaya, O., Pont, C., Sibout, R., Martinek, P., Badaeva, E., Murat, F., Chosson, A., Watanabe, N., Prat, E., Gautier, N., Gautier, V., Poncet, C., Orlov, Y.L., Krasnikov, A.A., Berges, H., Salina, E., Laikova, L., and Salse, J. (2015). FRIZZY PANICLE Drives Supernumerary Spikelets in Bread Wheat. Plant physiology 167, 189-199.

Draeger, C., Ndinyanka Fabrice, T., Gineau, E., Mouille, G., Kuhn, B.M., Moller, I., Abdou, M.T., Frey, B., Pauly, M., Bacic, A., and Ringli, C. (2015). Arabidopsis leucine-rich repeat extensin (LRX) proteins modify cell wall composition and influence plant growth. BMC plant biology 15, 155.

Esque, J., Urbain, A., Etchebest, C., and de Brevern, A.G. (2015). Sequence-structure relationship study in all-alpha transmembrane proteins using an unsupervised learning approach. Amino Acids 47, 2303-2322.

Farace, G., Visconti, S., Marchive, C., Aducci, P., Marra, M., and Trossat-Magnin, C.
(2015). Characterization, functional validation and gene expression patterns of two 14-3-3 isoforms from Vitis vinifera. Vitis 54, 33-40.

Fernandez, A., Drozdzecki, A., Hoogewijs, K., Vassileva, V., Madder, A., Beeckman, T., and Hilson, P. (2015). The GLV6/RGF8/CLEL2 peptide regulates early pericycle divisions during lateral root initiation. Journal of experimental botany 66, 5245-5256.

Flourat, A.L., Peru, A.A.M., Teixeira, A.R.S., Brunissen, F., and Allais, F. (2015). Chemo-enzymatic synthesis of key intermediates (S)-gamma-hydroxymethyl-alpha,beta- butenolide and (S)-gamma-hydroxymethyl-gamma-butyrolactone via lipase-mediated Baeyer-Villiger oxidation of levoglucosenone. Green Chem. 17, 404-412.

Francin-Allami, M., Merah, K., Albenne, C., Rogniaux, H., Pavlovic, M., Lollier, V., Sibout, R., Guillon, F., Jamet, E., and Larre, C. (2015). Cell wall proteomic of Brachypodium distachyon grains: A focus on cell wall remodeling proteins. Proteomics 15, 2296-2306.

Froissard, M., Canonge, M., Pouteaux, M., Cintrat, B., Mohand-Oumoussa, S., Guillouet, S.E., Chardot, T., Jacques, N., and Casaregola, S. (2015). Lipids containing medium-chain fatty acids are specific to post-whole genome duplication Saccharomycotina yeasts. BMC evolutionary biology 15, 97.

Fujimoto, M., Suda, Y., Vernhettes, S., Nakano, A., and Ueda, T.
(2015). Phosphatidylinositol 3-Kinase and 4-Kinase Have Distinct Roles in Intracellular Trafficking of Cellulose Synthase Complexes in Arabidopsis thaliana. Plant & cell physiology 56, 287-298.

Galland, M., and Rajjou, L.
(2015). Regulation of mRNA translation controls seed germination and is critical for seedling vigor. Front Plant Sci 6, 284.

Ghorbani, S., Lin, Y.-C., Parizot, B., Fernandez, A., Njo, M.F., Van de Peer, Y., Beeckman, T., and Hilson, P. (2015). Expanding the repertoire of secretory peptides controlling root development with comparative genome analysis and functional assays. Journal of experimental botany 66, 5257-5269.

Girard, C., Chelysheva, L., Choinard, S., Froger, N., Macaisne, N., Lehmemdi, A., Mazel, J., Crismani, W., and Mercier, R. (2015). AAA-ATPase FIDGETIN-LIKE 1 and Helicase FANCM Antagonize Meiotic Crossovers by Distinct Mechanisms. PLoS genetics 11, e1005369.

Gironde, A., Etienne, P., Trouverie, J., Bouchereau, A., Le Caherec, F., Leport, L., Orsel, M., Niogret, M.-F., Nesi, N., Carole, D., Soulay, F., Masclaux-Daubresse, C., and Avice, J.-C. (2015). The contrasting N management of two oilseed rape genotypes reveals the mechanisms of proteolysis associated with leaf N remobilization and the respective contributions of leaves and stems to N storage and remobilization during seed filling. BMC plant biology 15, 437.

Goncalves, B., Hasson, A., Belcram, K., Cortizo, M., Morin, H., Nikovics, K., Vialette-Guiraud, A., Takeda, S., Aida, M., Laufs, P., and Arnaud, N. (2015). A conserved role for CUP-SHAPED COTYLEDON genes during ovule development. Plant J. 83, 732-742.

Grandbastien, M.A. (2015). LTR retrotransposons, handy hitchhikers of plant regulation and stress response. Biochim Biophys Acta 1849, 403-416.

Granier, F., Lemaire, A., Wang, Y., LeBris, P., Antelme, S., Vogel, J., Laudencia-Chingcuanco, D., and Sibout, R.
(2015). Chemical and Radiation Mutagenesis: Induction and Detection by Whole Genome Sequencing (Springer New York), pp. 1-16.

Griffiths, J.S., Sola, K., Kushwaha, R., Lam, P., Tateno, M., Young, R., Voiniciuc, C., Dean, G., Mansfield, S.D., DeBolt, S., and Haughn, G.W. (2015). Unidirectional movement of cellulose synthase complexes in Arabidopsis seed coat epidermal cells deposit cellulose involved in mucilage extrusion, adherence, and ray formation. Plant physiology 168, 502-520.

Grimault, A., Gendrot, G., Chaignon, S., Gilard, F., Tcherkez, G., Thevenin, J., Dubreucq, B., Depege-Fargeix, N., and Rogowsky, P.M
. (2015). Role of B3 domain transcription factors of the AFL family in maize kernel filling. Plant science : an international journal of experimental plant biology 236, 116-125.

Grimault, A., Gendrot, G., Chamot, S., Widiez, T., Rabillé, H., Gérentes, M.-F., Creff, A., Thévenin, J., Dubreucq, B., Ingram, G.C., Rogowsky, P.M., and Depège-Fargeix, N. (2015). ZmZHOUPI, an endosperm-specific basic helix–loop–helix transcription factor involved in maize seed development. The Plant Journal 84, 574-586.

Hecker, A., Brand, L.H., Peter, S., Simoncello, N., Kilian, J., Harter, K., Gaudin, V., and Wanke, D.
(2015). The Arabidopsis GAGA-Binding Factor BASIC PENTACYSTEINE6 Recruits the POLYCOMB-REPRESSIVE COMPLEX1 Component LIKE HETEROCHROMATIN PROTEIN1 to GAGA DNA Motifs. Plant physiology 168, 1013-1024.

Hepworth, S.R., and Pautot, V.A. (2015). Beyond the Divide: Boundaries for Patterning and Stem Cell Regulation in Plants. Front Plant Sci 6, 1052.

Hofte, H. (2015). The Yin and Yang of Cell Wall Integrity Control: Brassinosteroid and FERONIA Signaling. Plant & cell physiology 56, 224-231.

Hummel, M., Dobrenel, T., Cordewener, J.J., Davanture, M., Meyer, C., Smeekens, S.J., Bailey-Serres, J., America, T.A., and Hanson, J. (2015). Proteomic LC-MS analysis of Arabidopsis cytosolic ribosomes: Identification of ribosomal protein paralogs and re-annotation of the ribosomal protein genes. Journal of proteomics 128, 436-449.

Ilk, N., Ding, J., Ihnatowicz, A., Koornneef, M., and Reymond, M. (2015). Natural variation for anthocyanin accumulation under high-light and low-temperature stress is attributable to the ENHANCER OF AG-4 2 (HUA2) locus in combination with PRODUCTION OF ANTHOCYANIN PIGMENT1 (PAP1) and PAP2. The New phytologist 206, 422-435.

Jabbour, F., Udron, M., Le Guilloux, M., Goncalves, B., Manicacci, D., Nadot, S., and Damerval, C. (2015). Flower development schedule and AGAMOUS-like gene expression patterns in two morphs of Nigella damascena (Ranunculaceae) differing in floral architecture. Bot. J. Linnean Soc. 178, 608-619.

Jegu, T., Domenichini, S., Blein, T., Ariel, F., Christ, A., Kim, S.K., Crespi, M., Boutet-Mercey, S., Mouille, G., Bourge, M., Hirt, H., Bergounioux, C., Raynaud, C., and Benhamed, M. (2015). A SWI/SNF Chromatin Remodelling Protein Controls Cytokinin Production through the Regulation of Chromatin Architecture. PloS one 10, e0138276.

Kelemen, Z., Sebastian, A., Xu, W., Grain, D., Salsac, F., Avon, A., Berger, N., Tran, J., Dubreucq, B., Lurin, C., Lepiniec, L., Contreras-Moreira, B., and Dubos, C.
(2015). Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PloS one 10, e0141044.

Khan, M., Ragni, L., Tabb, P., Salasini, B.C., Chatfield, S., Datla, R., Lock, J., Kuai, X., Despres, C., Proveniers, M., Yongguo, C., Xiang, D., Morin, H., Rulliere, J.P., Citerne, S., Hepworth, S.R., and Pautot, V. (2015). Repression of Lateral Organ Boundary Genes by PENNYWISE and POUND-FOOLISH Is Essential for Meristem Maintenance and Flowering in Arabidopsis. Plant physiology 169, 2166-2186.

Kopecny, D., Koncitikova, R., Popelka, H., Briozzo, P., Vigouroux, A., Kopecna, M., Zalabak, D., Sebela, M., Skopalova, J., Frebort, I., and Morera, S. (2015). Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site. The FEBS journal 283(2), 361-77.

Krapp, A. (2015). Plant nitrogen assimilation and its regulation: a complex puzzle with missing pieces. Current opinion in plant biology 25, 115-122.

Kravchenko, A., Citerne, S., Jehanno, I., Bersimbaev, R.I., Veit, B., Meyer, C., and Leprince, A.S. (2015). Mutations in the Arabidopsis Lst8 and Raptor genes encoding partners of the TOR complex, or inhibition of TOR activity decrease abscisic acid (ABA) synthesis. Biochemical and biophysical research communications 467, 992-997.

Landrein, B., Kiss, A., Sassi, M., Chauvet, A., Das, P., Cortizo, M., Laufs, P., Takeda, S., Aida, M., Traas, J., Vernoux, T., Boudaoud, A., and Hamant, O. (2015). Mechanical stress contributes to the expression of the STM homeobox gene in Arabidopsis shoot meristems. eLife 4, 1-27.

Le Hir, R., Spinner, L., Klemens, Patrick A.W., Chakraborti, D., de Marco, F., Vilaine, F., Wolff, N., Lemoine, R., Porcheron, B., Géry, C., Téoulé, E., Chabout, S., Mouille, G., Neuhaus, H.E., Dinant, S., and Bellini, C.
(2015). Disruption of the Sugar Transporters AtSWEET11 and AtSWEET12 Affects Vascular Development and Freezing Tolerance in Arabidopsis. Molecular Plant 8, 1687-1690.

Leprince, A.S., Magalhaes, N., De Vos, D., Bordenave, M., Crilat, E., Clement, G., Meyer, C., Munnik, T., and Savoure, A. (2015). Involvement of Phosphatidylinositol 3-kinase in the regulation of proline catabolism in Arabidopsis thaliana. Front Plant Sci 5, 772.

Leverenz, R.L., Sutter, M., Wilson, A., Gupta, S., Thurotte, A., Bourcier de Carbon, C., Petzold, C.J., Ralston, C., Perreau, F., Kirilovsky, D., and Kerfeld, C.A. (2015). PHOTOSYNTHESIS. A 12 A carotenoid translocation in a photoswitch associated with cyanobacterial photoprotection. Science (New York, N.Y.) 348, 1463-1466.

Li-Marchetti, C., Le Bras, C., Relion, D., Citerne, S., Huche-Thelier, L., Sakr, S., Morel, P., and Crespel, L. (2015). Genotypic differences in architectural and physiological responses to water restriction in rose bush. Front Plant Sci 6, 355.

Lopez-Obando, M., Ligerot, Y., Bonhomme, S., Boyer, F.D., and Rameau, C. (2015). Strigolactone biosynthesis and signaling in plant development. Development (Cambridge, England) 142, 3615-3619.

Luo, Y., Scholl, S., Doering, A., Zhang, Y., Irani, N.G., Di Rubbo, S., Neumetzler, L., Krishnamoorthy, P., Van Houtte, I., Mylle, E., Bischoff, V., Vernhettes, S., Winne, J., Friml, J., Stierhof, Y.D., Schumacher, K., Persson, S., and Russinova, E.
(2015). V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis. Nat. Plants 1.

Mameri, H., Brossard, C., Gaudin, J.-C., Gohon, Y., Paty, E., Beaudouin, E., Moneret-Vautrin, D.-A., Drouet, M., Sole, V., Wien, F., Lupi, R., Larre, C., Snegaroff, J., and Denery-Papini, S. (2015). Structural Basis of IgE Binding to alpha- and gamma-Gliadins: Contribution of Disulfide Bonds and Repetitive and Nonrepetitive Domains. Journal of agricultural and food chemistry 63, 6546-6554.

Martinez de Alba, A.E., Moreno, A.B., Gabriel, M., Mallory, A.C., Christ, A., Bounon, R., Balzergue, S., Aubourg, S., Gautheret, D., Crespi, M.D., Vaucheret, H., and Maizel, A. (2015). In plants, decapping prevents RDR6-dependent production of small interfering RNAs from endogenous mRNAs. Nucleic acids research 43, 2902-2913.

Maugarny, A., Goncalves, B., Arnaud, N., and Laufs, P. (2015). CUC Transcription Factors: To the Meristem and Beyond. In Plant Transcription factors, D.H. Gonzalez, ed (Academic Press.)

McCarthy, E.W., Arnold, S.E., Chittka, L., Le Comber, S.C., Verity, R., Dodsworth, S., Knapp, S., Kelly, L.J., Chase, M.W., Baldwin, I.T., Kovarik, A., Mhiri, C., Taylor, L., and Leitch, A.R. (2015). The effect of polyploidy and hybridization on the evolution of floral colour in Nicotiana (Solanaceae). Annals of botany 115, 1117-1131.

Mercier, R., Mezard, C., Jenczewski, E., Macaisne, N., and Grelon, M. (2015). The molecular biology of meiosis in plants. In Annu Rev Plant Biol, pp. 297-327.

Mezard, C., Tagliaro Jahns, M., and Grelon, M. (2015). Where to cross? New insights into the location of meiotic crossovers. Trends in genetics : TIG 31, 393-401.

Miquel, M., Trigui, G., Trubuil, A., and Dubreucq, B. (2015). Imaging and quantitative analysis of size and distribution of sperical bodies, [i]e.g[/i]. embryonic oil bodies. Bio-Protocole 5, 1-6.

Mozgova, I., Kohler, C., Gaudin, V., and Hennig, L.
(2015). The many faces of plant chromatin: Meeting summary of the 4th European workshop on plant chromatin 2015, Uppsala, Sweden. Epigenetics 10, 1084-1090.

Nguyen, T.P., Cueff, G., Hegedus, D.D., Rajjou, L., and Bentsink, L. (2015). A role for seed storage proteins in Arabidopsis seed longevity. Journal of experimental botany 66, 6399-6413.

Ouibrahim, L., Rubio, A.G., Moretti, A., Montane, M.H., Menand, B., Meyer, C., Robaglia, C., and Caranta, C. (2015). Potyviruses differ in their requirement for TOR signalling. The Journal of general virology 96, 2898-2903.

Oulame, M.Z., Pion, F., Allauddin, S., Raju, K., Ducrot, P.H., and Allais, F.
(2015). Renewable alternating aliphatic-aromatic poly(ester-urethane)s prepared from ferulic acid and bio-based diols. Eur. Polym. J. 63, 186-193.

Parent, J.S., Bouteiller, N., Elmayan, T., and Vaucheret, H.
(2015). Respective contributions of Arabidopsis DCL2 and DCL4 to RNA silencing. The Plant journal : for cell and molecular biology 81, 223-232.

Parent, J.S., Jauvion, V., Bouche, N., Beclin, C., Hachet, M., Zytnicki, M., and Vaucheret, H. (2015). Post-transcriptional gene silencing triggered by sense transgenes involves uncapped antisense RNA and differs from silencing intentionally triggered by antisense transgenes. Nucleic acids research 43, 8464-8475.

Peaucelle, A., Wightman, R., and Hofte, H. (2015). The Control of Growth Symmetry Breaking in the Arabidopsis Hypocotyl. Current biology : CB 25, 1746-1752.

Pelletier, G., and Budar, F. (2015). Brassica Ogu-INRA Cytoplasmic Male Sterility: An Example of Successful Plant Somatic Fusion for Hybrid Seed Production. In Somatic Genome Manipulation, X.-Q. Li, D.J. Donnelly, and T.G. Jensen, eds (Springer New York), pp. 199-216.

Pion, F., Reano, A.F., Oulame, M.Z., Barbara, I., Flourat, A.L., Ducrot, P.H., and Allais, F. (2015). Chemo-enzymatic Synthesis, Derivatizations, and Polymerizations of Renewable Phenolic Monomers Derived from Ferulic Acid and Biobased Polyols : An access to Sustainable Copolyesters, Poly(esther-urethane)s, and Poly(ester-alkenamer)s. In Green Polymer Chemistry : Biobased Materials and Biocatalysis, pp. 41-68.

Poncet, V., Scutt, C., Tournebize, R., Villegente, M., Cueff, G., Rajjou, L., Balliau, T., Zivy, M., Fogliani, B., Job, C., de Kochko, A., Sarramegna-Burtet, V., and Job, D. (2015). The Amborella vacuolar processing enzyme family. Front Plant Sci 6, 618.

Portemer, V., Renne, C., Guillebaux, A., and Mercier, R. (2015). Large genetic screens for gynogenesis and androgenesis haploid inducers in Arabidopsis thaliana failed to identify mutants. Front Plant Sci 6, 147.

Poulet, A., Arganda-Carreras, I., Legland, D., Probst, A.V., Andrey, P., and Tatout, C. (2015). NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei. Bioinformatics (Oxford, England) 31, 1144-1146.

Purkrtová, Z., Chardot, T., and Froissard, M. (2015). N-terminus of seed caleosins is essential for lipid droplet sorting but not for lipid accumulation. Archives of biochemistry and biophysics 579, 47-54.

Rameau, C., Bertheloot, J., Leduc, N., Andrieu, B., Foucher, F., and Sakr, S. (2015). Multiple pathways regulate shoot branching. Front Plant Sci 5, 741.

Rast-Somssich, M.I., Broholm, S., Jenkins, H., Canales, C., Vlad, D., Kwantes, M., Bilsborough, G., Dello Ioio, R., Ewing, R.M., Laufs, P., Huijser, P., Ohno, C., Heisler, M.G., Hay, A., and Tsiantis, M. (2015). Alternate wiring of a KNOXI genetic network underlies differences in leaf development of A. thaliana and C. hirsuta. Genes & development 29, 2391-2404.

Rexin, D., Meyer, C., Robaglia, C., and Veit, B.
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2014

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Charlot, F., Chelysheva, L., Kamisugi, Y., Vrielynck, N., Guyon, A., Epert, A., Guin, S.L., Schaefer, D.G., Cuming, A.C., Grelon, M., and Nogue, F. (2014). RAD51B plays an essential role during somatic and meiotic recombination in Physcomitrella. Nucleic Acids Res 42, 11965-11978.

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Courtial, A., Mechin, V., Reymond, M., Grima-Pettenati, J., and Barriere, Y. (2014). Colocalizations Between Several QTLs for Cell Wall Degradability and Composition in the F288 x F271 Early Maize RIL Progeny Raise the Question of the Nature of the Possible Underlying Determinants and Breeding Targets for Biofuel Capacity. BioEnergy Res. 7, 142-156.

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Dahan, J., Tcherkez, G., Macherel, D., Benamar, A., Belcram, K., Quadrado, M., Arnal, N., and Mireau, H. (2014). Disruption of the CYTOCHROME C OXIDASE DEFICIENT 1 gene leads to cytochrome c oxidase depletion and reorchestrated respiratory metabolism in Arabidopsis thaliana. Plant Physiol 166, 1788-1802.

David, L.C., Dechorgnat, J., Berquin, P., Routaboul, J.M., Debeaujon, I., Daniel-Vedele, F., and Ferrario-Mery, S. (2014). Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7. J Exp Bot 65, 885-893.

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2013

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Arc E, Sechet J, Corbineau F, Rajjou L, Marion-Poll A
(2013) ABA crosstalk with ethylene and nitric oxide in seed dormancy and germination. Front Plant Sci 4, 63

Arnaud N, Laufs P (2013) Plant development: brassinosteroids go out of bounds. Curr Biol. 23: R152-154.

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Blein T, Pautot V, Laufs P (2013) Combinations of mutations sufficient to alter Arabidopsis leaf dissection. Plants 2: 230-247

Bonhomme S, Nogue F, Rameau C, Schaefer DG (2013) Usefulness of Physcomitrella patens for studying plant organogenesis. Methods Mol Biol 959: 21-43

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Chen VX, Boyer FD, Rameau C, Pillot JP, Vors JP, Beau JM (2013) New synthesis of A-ring aromatic strigolactone analogues and their evaluation as plant hormones in pea (Pisum sativum). Chemistry 19: 4849-4857

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Crismani, W., Portemer, V., Froger, N., Chelysheva, L., Horlow, C., Vrielynck, N., and Mercier, R. (2013) MCM8 Is Required for a Pathway of Meiotic Double-Strand Break Repair Independent of DMC1 in Arabidopsis thaliana., PLoS genetics 9, e1003165.

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Fernandez A, Hilson P and Beeckman T (2013) GOLVEN peptides as important regulatory signaling molecules of plant development. J. Exp. Bot. 64, in press.

Gaufichon L, Masclaux-Daubresse C, Tcherkez G, Reisdorf-Cren M, Sakakibara Y, Hase T, Clément G, Avice J, Grandjean O, Marmagne A, Boutet-Mercey S, Azzopardi M, Soulay F, Suzuki A (2013) Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth. Plant Cell and Environment 36: 328-342

Geshi N., Johansen J.N., Dilukpimol A., Rolland A., Belcram K., Kutake T., Tsumuraya Y., Kaneko S., Tryfona D., Dupree P., Scheller, H.V., Hofte, H. and Mouille, G. (2013). A galactosyltransferase acting on arabinogalactan protein glycans is essential for embryo development in Arabidopsis. Plant Journal doi: 10.1111/tpj.12281

Guiboileau A, Avila-Ospina L, Yoshimoto K, Soulay F, Azzopardi M, Marmagne A, Lothier J, Masclaux-Daubresse C (2013) Physiological and metabolic consequences of autophagy defisciency for the management of nitrogen and protein resources in Arabidopsis leaves depending on nitrate availability. New Phytologist in press doi: 10.1111/nph.12307

Gobron N, Waszcak C, Simon M, Hiard S, Boivin S, Charif D, Ducamp A, Wenes E, Budar F (2013) A Cryptic Cytoplasmic Male Sterility Unveils a Possible Gynodioecious Past for Arabidopsis thaliana. PLoS ONE 8(4):e62450.

Goncalves B, Nougue O, Jabbour F, Ridel C, Morin H, Laufs P, Manicacci D, Damerval C (2013) An APETALA3 homolog controls both petal identity and floral meristem patterning in Nigella damascena L. (Ranunculaceae). Plant J doi: 10.1111/tpj.12284

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Jolivet P, Deruyffelaere C, Boulard C, Quinsac A, Savoire R, Nesi N, Chardot T (2013) Deciphering the structural organization of the oil bodies in the Brassica napus seed as a mean to improve the oil extraction yield. Ind Crop Prod 44: 549-557

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Kubienova L, Kopecny D, Tylichova M, Briozzo P, Skopalova J, Sebela M, Navratil M, Tache R, Luhova L, Barroso JB, Petrivalsky M (2013) Structural and functional characterization of a plant S-nitrosoglutathione reductase from Solanum lycopersicum. Biochimie 95: 889-902

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Lounifi I, Arc E, Molassiotis A, Job D, Rajjou L, Tanou G (2013) Interplay between protein carbonylation and nitrosylation in plants. Proteomics 13, 568-578

Marchive C, Roudier F, Castaings L, Bréhaut V,  Blondet E, Colot V, Meyer C and Krapp A (2013). Nuclear retention of the transcription factor NLP7 orchestrates the early response to nitrate in plants. Nat. Commun 4:1713.

Martinez de Alba, A.E., Parent, J.S. and Vaucheret, H. (2013) Small RNA-mediated control of development in plants. in Epigenetic Memory and Control in Plants. Grafi, G. and Ohad, N. editors. Signaling and Communication in Plants 18, DOI 10.1007/978-3-642-35227-0_9. Springer-Verlag Berlin Heidelberg, 177-189.

Moreno, A.B., Martinez de Alba, A.E., Bardou, F., Crespi, M.D., Vaucheret, H., Maizel, A. and Mallory, A.C. (2013) Cytoplasmic and nuclear quality control and turnover of single-stranded RNA modulate post-transcriptional gene silencing in plants. Nucleic Acids Res 41, 4699-4708.

Mouterde LMM, Flourat AL, Cannet MMM, Ducrot P-H and Allais F (2013). Chemoenzymatic Total Synthesis of a Naturally Occurring (5-5 ')/(8 '-O-4 '') Dehydrotrimer of Ferulic Acid. Eur. J. Org. Chem., 173-179.

Pawlowski, W.P.; Grelon, M; Armstrong, S (Eds.) (2013) Plant Meiosis, Methods and Protocols, Series: Methods in Molecular Biology, Vol. 990 XV, 238 p. 52 illus., 28 illus. in color. Humana Press

Pion F, Reano AF, Ducrot P-H and Allais F (2013). Chemo-enzymatic preparation of new bio-based bis-and trisphenols: new versatile building blocks for polymer chemistry. RSC Adv. 3: 8988-8997.

Poulsen C, Vaucheret H, Brodersen P. (2013) Lessons on RNA silencing Mechanisms in Plants from Eukaryotic Argonaute Structures. Plant Cell. 2013 Jan 9. [Epub ahead of print] doi/10.1105/tpc.112.105643

Renault H, El Amrani A, Berger A -Taconnat L, Bouchereau A, Deleu C. (2013). Plant Cell Environ. 201336(5):1009-18.

Reynaud C, Tapin-Lingua S, Elegir G, Petit-Conil M and Baumberger S. (2013). Phenomena responsible for the hydrophobic properties confered to Kraft pulp by a laccase-catalyzed treatment with lauryl gallate. J. Biotechnol. 167: 302-308.

Renny-Byfield S, Kovarik A, Kelly L, Macas J, Novak P, Chase M, Nichols RA, Pancholi M, Grandbastien M-A, Leitch A (2013) Diploidisation and genome size change in allopolyploids is associated with differential dynamics of low and high copy sequences. Plant J 74: 829-839

Saez-Aguayo S, Ralet MC, Berger A, Botran L, Marion-Poll A, North HM (2013) PECTIN METHYLESTERASE INHIBITOR6 promotes Arabidopsis mucilage release by limiting methylesterification of homogalacturonan in seed coat epidermal cells. Plant Cell 25, 308-323

Silveira A.B., Trontin C., Cortijo S., Barau J., Vieira Del Bem L.E., Loudet O., Colot V., Vincentz M. (2013) Extensive natural epigenetic variation at a de novo originated gene.  PLoS Genetics  9(4): e1003437

Sipponen MH, Lapierre C, Mechin V and Baumberger S (2013). Isolation of structurally distinct lignin-carbohydrate fractions from maize stem by sequential alkaline extractions and endoglucanase treatment. Bioresour. Technol.133C: 522-528.

Snegaroff J, Bouchez I, Smaali Mel A, Pecquet C, Raison-Peyron N, Jolivet P, Lauriere M (2013) Barley gamma3-hordein: glycosylation at an atypical site, disulfide bridge analysis, and reactivity with IgE from patients allergic to wheat. Biochim Biophys Acta Proteins and Proteomics 1834: 395-403

Spinner L, Gadeyne A, Belcram K, Goussot M, Moison M, Duroc Y, Eeckhout D, De Winne N, Schaefer E, Van De Slijke E, Persiau G, Witters E, Gevaert K, De Jaeger G, Bouchez D, Van Damme D and Pastuglia M (2013). A protein phosphatase 2A complex spatially controls plant cell division. Nature Comunications, in press

Tisné S., Serrand Y., Bach L., Gilbault E., Ben Ameur R., Balasse H., Voisin R., Bouchez D., Durand-Tardif M., Guerche P., Chareyron G., Da Rugna J., Camilleri C., Loudet O. (2013)  PHENOSCOPE: an automated large-scale phenotyping platform offering high spatial homogeneity. The Plant Journal  74: 534-544 

Vaucheret, H. and Masson, J. (2013) Les plantes aussi se soignent aux petits ARN. Biofutur 340, 39.

Vilaine F, Kerchev P, Clement G, Batailler B, Cayla T, Bill L, Gissot L, Dinant S (2013) Increased Expression of a Phloem Membrane Protein Encoded by NHL26 Alters Phloem Export and Sugar Partitioning in Arabidopsis. Plant Cell 25: 1689-1708

Vindigni JD, Wien F, Giuliani A, Erpapazoglu Z, Tache R, Jagic F, Chardot T, Gohon Y, Froissard M (2013) Fold of an oleosin biologically targeted into cellular oil bodies. Biochim Biophys Acta Biomembranes 1828: 1881-1888

Wang Y, Chantreau M, Sibout R,Hawkins S (2013). Plant cell wall lignification and monolignol metabolism. Front Plant Sci. 4 : 220.

Zhong, S.H., Liu, J.Z., Jin, H., Lin, L., Li, Q., Chen, Y., Yuan, Y.X., Wang, Z.Y., Huang, H., Qi, Y.J. et al. (2013) Warm temperatures induce transgenerational epigenetic release of RNA silencing by inhibiting siRNA biogenesis in Arabidopsis. Proc Natl Acad Sci U S A  110, 9171-9176.

 

2012

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Acevedo, F., Rubilar, M., Shene, C., Navarrete, P., Romero, F., Rabert, C., Jolivet, P., Valot, B., and Chardot, T. (2012). Seed Oil Bodies from Gevuina avellana and Madia sativa. Journal of agricultural and food chemistry 60, 6994-7004.

Akroun M, Jannin L, Laîné P, Etienne P, Masclaux-Daubresse C, Citerne S, Garnica M, Garcia-Mina J, Yvin J, Ourry A. (2012). A physiological and molecular study of the effects of nickel defisciency and phenylphosphorodiamidate (PPD) application on urea metabolism in oilseed rape (Brassica napus L.). Plant Soil.

Amiour, N., Imbaud, S., Clement, G., Agier, N., Zivy, M., Valot, B., Balliau, T., Armengaud, P., Quillere, I., Canas, R., Tercet-Laforgue, T., and Hirel, B. (2012). The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize. Journal of experimental botany 63, 5017-5033.

Barriere, Y., Mechin, V., Lefevre, B., and Maltese, S. (2012). QTLs for agronomic and cell wall traits in a maize RIL progeny derived from a cross between an old Minnesota13 line and a modern Iodent line. Theoretical and Applied Genetics 125, 531-549.

Barthole, G., Lepiniec, L., Rogowsky, P.M., and Baud, S. (2012). Controlling lipid accumulation in cereal grains. Plant Sci 185-186, 33-39.

Batailler, B., Lemaitre, T., Vilaine, F., Sanchez, C., Renard, D., Cayla, T., Beneteau, J., and Dinant, S. (2012). Soluble and filamentous proteins in Arabidopsis sieve elements. Plant Cell and Environment 35, 1258-1273.

Beopoulos, A., Haddouche, R., Kabran, P., Dulermo, T., Chardot, T., and Nicaud, J.M. (2012). Identification and characterization of DGA2, an acyltransferase of the DGAT1 acyl-CoA:diacylglycerol acyltransferase family in the oleaginous yeast Yarrowia lipolytica. New insights into the storage lipid metabolism of oleaginous yeasts. Applied Microbiology and Biotechnology 93, 1523-1537.

Bernard, A. et al. Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. The Plant cell 24, 3106-3118, doi:10.1105/tpc.112.099796 (2012).

Berger, N., and Dubreucq, B. (2012). Evolution goes GAGA: GAGA binding proteins across kingdoms. Biochimica Et Biophysica Acta-Gene Regulatory Mechanisms 1819, 863-868.

Berthet S, Thévenin J, Baratiny D, Demont-Caulet N, Debeaujon I, Bidzinski P, Leple JC, Huis R, Hawkins S, Gomez LD, Lapierre C, Jouanin, L (2012) Role of plant laccases in lignin polymerization. In Lignins, biosynthesis, biodegradation and bioengineering. In Advances in Botanical Research 61, Jouanin L and Lapierre C eds (Elsevier Ltd), pp 145-172

Bigeard, J., Pflieger, D., Colcombet, J., Gérard, L., Mireau, H., and Hirt, H. (2012). Protein Complexes Characterization in Arabidopsis thaliana by Tandem Affinity Purification Coupled to Mass Spectrometry Analysis (Humana Press.

Bonhomme, S., Nogué, F., Rameau, C., and Schaefer, D.G. (2012). Usefulness of Physcomitrella patens for studying plant organogenesis. In Plant Organogenesis: Methods and Protocols, I.D. Smet, ed (New York: Humana Press.

Bouteille, M., Rolland, G., Balsera, C., Loudet, O., and Muller, B. (2012). Disentangling the Intertwined Genetic Bases of Root and Shoot Growth in Arabidopsis. Plos One 7.

Bouvier d'Yvoire, M., Bouchabke-Coussa, O., Voorend, W., Antelme, S., Cezard, L., Legee, F., Lebris, P., Legay, S., Whitehead, C., McQueen-Mason, S.J., Gomez, L.D., Jouanin, L., Lapierre, C., and Sibout, R. (2012). Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon. Plant J. DOI: 10.1111/tpj.12053

Boyer, F.D., de Saint Germain, A., Pillot, J.P., Pouvreau, J.B., Chen, V.X., Ramos, S., Stevenin, A., Simier, P., Delavault, P., Beau, J.M., and Rameau, C. (2012). Structure-activity relationship studies of strigolactone-related molecules for branching inhibition in garden pea: molecule design for shoot branching. Plant physiology 159, 1524-1544.

Brandt, R., Salla-Martret, M., Bou-Torrent, J., Musielak, T., Stahl, M., Lanz, C., Ott, F., Schmid, M., Greb, T., Schwarz, M., Choi, S.B., Quint, M., Palauqui, J.C., Martinez-Garcia, J.F., and Wenkel, S. (2012). Genome-wide binding-site analysis of REVOLUTA reveals a link between leaf patterning and light-mediated growth responses. Plant J.

Braun, N., de Saint Germain, A., Pillot, J.P., Boutet-Mercey, S., Dalmais, M., Antoniadi, I., Li, X., Maia-Grondard, A., Le Signor, C., Bouteiller, N., Luo, D., Bendahmane, A., Turnbull, C., and Rameau, C. (2012). The pea TCP transcription factor PsBRC1 acts downstream of Strigolactones to control shoot branching. Plant Physiol 158, 225-238.

Braybrook, S.A., Hofte, H., and Peaucelle, A. (2012). Probing the mechanical contributions of the pectin matrix: Insights for cell growth. Plant signaling & behavior 7.

Canas, R.A., Quillere, I., Gallais, A., and Hirel, B. (2012). Can genetic variability for nitrogen metabolism in the developing ear of maize be exploited to improve yield? New Phytol 194, 440-452.

Chapelle, A., Morreel, K., Vanholme, R., Le-Bris, P., Morin, H., Lapierre, C., Boerjan, W., Jouanin, L., and Demont-Caulet, N. (2012). Impact of the Absence of Stem-Specific beta-Glucosidases on Lignin and Monolignols. Plant physiology 160, 1204-1217.

Castelain, M., Le Hir, R., and Bellini, C. (2012). The non-DNA-binding bHLH transcription factor PRE3/bHLH135/ATBS1/TMO7 is involved in the regulation of light signaling pathway in Arabidopsis. Physiol Plant.

Chavigneau H., Goué N., Delaunay S., Courtial A., Jouanin L., Reymond M., Méchin V., Barrière Y. 2012. QTL for floral stem lignin content and degradability in three recombinant inbred line (RIL) progenies of Arabidopsis thaliana and search for candidate genes involved in cell wall biosynthesis and degradability. Open Journal of Genetics 2 : 7-30.

Chardon, F., Noel, V., and Masclaux-Daubresse, C. (2012). Exploring NUE in crops and in Arabidopsis ideotypes to improve yield and seed quality. J Exp Bot 63, 3401-3412.

Chelysheva, L., Vezon, D., Chambon, A., Gendrot, G., Pereira, L., Lemhemdi, A., Vrielynck, N., Le Guin, S., Novatchkova, M., and Grelon, M. (2012). The Arabidopsis HEI10 Is a New ZMM Protein Related to Zip3. PLoS genetics 8, e1002799.

Cortizo, M., and Laufs, P. (2012). Genetic basis of the "sleeping leaves" revealed. Proceedings of the National Academy of Sciences of the United States of America 109, 11474-11475.

Courtial A, Jourda C, Arribat S, Balzergue S, Huguet S, Reymond M, Grima-Pettenati J, Barrière Y. 2012 Comparative expression of cell wall related genes in four maize RILs and one parental line of variable lignin content and cell wall degradability. Maydica 57

Crismani, W., Girard, C., Froger, N., Pradillo, M., Santos, J.L., Chelysheva, L., Copenhaver, G.P., Horlow, C., and Mercier, R. (2012). FANCM limits meiotic crossovers. Science 336, 1588-1590.

Crismani W, Mercier R (2012) What limits meiotic crossovers? Cell cycle (Georgetown, Tex) 11: 3527–3528.

Crismani W, Girard C, Froger N, Pradillo M, Santos JL, et al. (2012) FANCM limits meiotic crossovers. Science (New York, NY) 336: 1588–1590.

Crismani W*, Portemer V*, Froger N, Chelysheva L, Horlow C, Vrielynck N, Mercier R. (2012) MCM8 is Required for a Pathway of Meiotic Double Strand Break Repair Independent of DMC1 in Arabidopsis thaliana.  PLoS Genetics. In press

Crismani W, Girard C and Mercier R. (2012) Tinkering with meiosis. Journal of Experimental Botany. In press.

Cromer, L., Heyman, J., Touati, S., Harashima, H., Araou, E., Girard, C., Horlow, C., Wassmann, K., Schnittger, A., De Veylder, L., and Mercier, R. (2012). OSD1 Promotes Meiotic Progression via APC/C Inhibition and Forms a Regulatory Network with TDM and CYCA1;2/TAM. PLoS genetics 8, e1002865.

Cubillos, F.A., Coustham, V., and Loudet, O. (2012). Lessons from eQTL mapping studies: non-coding regions and their role behind natural phenotypic variation in plants. Curr Opin Plant Biol 15, 192-198.

Cubillos, F.A., Yansouni, J., Khalili, H., Balzergue, S., Elftieh, S., Martin-Magniette, M.L., Serrand, Y., Lepiniec, L., Baud, S., Dubreucq, B., Renou, J.P., Camilleri, C., and Loudet, O. (2012). Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures. BMC Genomics 13, 117.

Debouba, M., Maaroufi-Dguimi, H., Ghorbel, M., Gouia, H., and Suzuki, A. (2012). Expression pattern of genes encoding nitrate and ammonium assimilating enzymes in Arabidopsis thaliana exposed to short term NaCl stress. Journal plant physiology (in press)

Dechorgnat, J., Patrit, O., Krapp, A., Fagard, M., and Daniel-Vedele, F. (2012). Characterization of the Nrt2.6 Gene in Arabidopsis thaliana: A Link with Plant Response to Biotic and Abiotic Stress. PloS one 7, e42491.

Denancé, N., Ranocha, P., Oria, N., Barlet, X., Rivière, M.-P., Yadeta, K.-A., Hoffmann, L., Perreau, F., Clément, .G, Maia-Grondard, A., van der Berg G.C.M., Savetti, B., Fournier, S., Aubert, Y., Pelletier, S., Thomma, B., Molina, A., Jouanin, L., Marco, Y., Goffner, D. (2012) Arabidopsis wat1 (wall are thin-1)-mediated resistance to the bacterial vascular pathogen, Ralstonia solanacearum, is accompagnied by cross-regulation of salicylic and tryptophan metabolism. Plant J, DOI: 10.1111/tpj.12027

DE PESSEMIER J, CHARDON F, JURANIEC M, DELAPLACE P, HERMANS C (2012) Natural variation of the root morphological response to nitrate supply in Arabidopsis thaliana. Mechanisms of Development "in press"

Dinant, S., and Kehr, J. (2012). Sampling and analysis of phloem sap. In Plant Mineral Nutrients: Methods and Protocols, F. Maathuis, ed (Humana Press, USA

Dinant, S., and Lucas, W.J. (2012). Sieve Elements: Puzzling Activities Deciphered by Proteomics Studies. In Biochemistry of Phloem, G.A. Thompson and A.J.E. van Bel, eds (Cichester, UK: Wiley & Sons.

Dinant, S., and Suárez-López, P. (2012). Multitude of long-distance signal molecules acting via phloem. In Signaling and Communication in Plants, G. Witzany and F. Baluška, eds

Drevensek, S., Goussot, M., Duroc, Y., Christodoulidou, A., Steyaert, S., Schaefer, E., Duvernois, E., Grandjean, O., Vantard, M., Bouchez, D., and Pastuglia, M. (2012). The Arabidopsis TRM1-TON1 interaction reveals a recruitment network common to plant cortical microtubule arrays and eukaryotic centrosomes. Plant Cell 24, 178-191.

Dun, E.A., de Saint Germain, A., Rameau, C., and Beveridge, C.A. (2012). Antagonistic action of strigolactone and cytokinin in bud outgrowth control. Plant Physiol 158, 487-498.

Durand, S., Bouche, N., Perez Strand, E., Loudet, O., and Camilleri, C. (2012). Rapid establishment of genetic incompatibility through natural epigenetic variation. Curr Biol 22, 326-331.

Eloy, N.B., Gonzalez, N., Van Leene, J., Maleux, K., Vanhaeren, H., De Milde, L., Dhondt, S., Vercruysse, L., Witters, E., Mercier, R., Cromer, L., Beemster, G.T.S., Remaut, H., Van Montagu, M.C.E., De Jaeger, G., Ferreira, P.C.G., and Inze, D. (2012). SAMBA, a plant-specific anaphase-promoting complex/cyclosome regulator is involved in early development and A-type cyclin stabilization. Proceedings of the National Academy of Sciences of the United States of America 109, 13853-13858.

Eudes, A., George, A., Mukerjee, P., Kim, J.S., Pollet, B., Benke, P.I., Yang, F., Mitra, P., Sun, L., Cetinkol, O.P., Chabout, S., Mouille, G., Soubigou-Taconnat, L., Balzergue, S., Singh, S., Holmes, B.M., Mukhopadhyay, A., Keasling, J.D., Simmons, B.A., Lapierre, C., Ralph, J., and Loque, D. (2012). Biosynthesis and incorporation of side-chain-truncated lignin monomers to reduce lignin polymerization and enhance saccharification. Plant Biotechnol J 10, 609-620.

Frey, A., Effroy, D., Lefebvre, V., Seo, M., Perreau, F., Berger, A., Sechet, J., To, A., North, H.M., and Marion-Poll, A. (2012). Epoxycarotenoid cleavage by NCED5 fine-tunes ABA accumulation and affects seed dormancy and drought tolerance with other NCED family members. The Plant journal : for cell and molecular biology 70, 501-512.

Froissard, M, Boulard, C, (2012) Optimisation de la production de lipides d'intérêt chez la levure par génie génétique. Techniques de l’ingénieur article

Galland, M., Job, D., and Rajjou, L. (2012). The seed proteome web portal. Front Plant Sci 3, 98.

Galland M, Lounifi I, Cueff G, Baldy A, Morin H, Job D, Rajjou L (2012) A role for "omics" technologies in exploration of the seed nutritional quality. In SEED DEVELOPMENT: OMICS Technologies toward Improvement of Seed Quality and Crop Yield. Eds Agrawal GK & Rakwal R, Springer (in press)

Gaufichon, L., Masclaux-Daubresse, C., Tcherkez, G., Reisdorf-Cren, M., Sakakibara, Y., Hase, T., Clement, G., Avice, J.C., Grandjean, O., Marmagne, A., Boutet-Mercey, S., Azzopardi, M., Soulay, F., and Suzuki, A. (2012). Arabidopsis thaliana ASN2 encoding asparagine synthetase is involved in the control of nitrogen assimilation and export during vegetative growth. Plant, cell & environment. doi: 10.1111/j.1365-3040.2012.02576.x

Gonneau, M., Hofte, H., and Vernhettes, S. (2012). Fluorescent tags to explore cell wall structure and dynamics. Front Plant Sci 3, 145.

Guiboileau A, Masclaux-Daubresse C. (2012). Autophagic processes in plants: Mechanisms, regulation and function. Comptes Rendus Biologies 335(6): 375-388.

Guiboileau, A., Yoshimoto, K., Soulay, F., Bataille, M.P., Avice, J.C., and Masclaux-Daubresse, C. (2012). Autophagy machinery controls nitrogen remobilization at the whole-plant level under both limiting and ample nitrate conditions in Arabidopsis. The New phytologist 194, 732-740.

Guillon, F., Larre, C., Petipas, F., Berger, A., Moussawi, J., Rogniaux, H., Santoni, A., Saulnier, L., Jamme, F., Miquel, M., Lepiniec, L., and Dubreucq, B. (2012). A comprehensive overview of grain development in Brachypodium distachyon variety Bd21. Journal of Experimental Botany 63, 739-755.

Gutierrez, L., Mongelard, G., Flokova, K., Pacurar, D.I., Novak, O., Staswick, P., Kowalczyk, M., Pacurar, M., Demailly, H., Geiss, G., and Bellini, C. (2012). Auxin Controls Arabidopsis Adventitious Root Initiation by Regulating Jasmonic Acid Homeostasis. The Plant cell 24, 2515-2527.

Harrington, M.J., Mutwil, M., Barrière, Y., and Sibout, R. (2012). Chapter 3 - Molecular Biology of Lignification in Grasses. In Advances in Botanical Research, Jouanin  and Lapierre, eds (Academic Press), pp. 77-112.

Houba-Herin, N., Hennig, L., Kohler, C., and Gaudin, V. (2012). A fruitful chromatin harvest: meeting summary of the Second European Workshop on Plant Chromatin 2011 in Versailles, France. Epigenetics : official journal of the DNA Methylation Society 7, 307-311.

Ikram, S., Bedu, M., Daniel-Vedele, F., Chaillou, S., and Chardon, F. (2012). Natural variation of Arabidopsis response to nitrogen availability. J Exp Bot 63, 91-105.

Jasinski, S., Lécureuil, A., Miquel, M., Loudet, O., Raffaele, S., Froissard, M., and Guerche, P. (2012). Natural variation in seed very long chain fatty acid content is controlled by a new isoform of KCS18 in Arabidopsis thaliana. PLoS ONE 11, e49261.

Jauvion, V., Rivard, M., Bouteiller, N., Elmayan, T., and Vaucheret, H. (2012). RDR2 partially antagonizes the production of RDR6-dependent siRNA in sense transgene-mediated PTGS. Plos One 7, e29785.

Jouannet, V., Moreno, A.B., Elmayan, T., Vaucheret, H., Crespi, M.D., and Maizel, A. (2012). Cytoplasmic Arabidopsis AGO7 accumulates in membrane-associated siRNA bodies and is required for ta-siRNA biogenesis. Embo Journal 31, 1704-1713.

Kamisugi, Y., Schaefer, D.G., Kozak, J., Charlot, F., Vrielynck, N., Hola, M., Angelis, K.J., Cuming, A.C., and Nogue, F. (2012). MRE11 and RAD50, but not NBS1, are essential for gene targeting in the moss Physcomitrella patens. Nucleic Acids Research 40, 3496-3510.

Khandal, D., Mikus, P.Y., Dole, P., Bliard, C., Soulestin, J., Lacrampe, M.F., Baumberger, S., and Coqueret, X. (2012). Tailoring the properties of thermoplastic starch by blending with cinnamyl alcohol and radiation processing: An insight into the competitive grafting and scission reactions. Radiation Physics and Chemistry 81, 986-990.

Kiani, S.P., Trontin, C., Andreatta, M., Simon, M., Robert, T., Salt, D.E., and Loudet, O. (2012). Allelic Heterogeneity and Trade-Off Shape Natural Variation for Response to Soil Micronutrient. PLoS genetics 8.

Kiba, T., Feria-Bourrellier, A.B., Lafouge, F., Lezhneva, L., Boutet-Mercey, S., Orsel, M., Brehaut, V., Miller, A., Daniel-Vedele, F., Sakakibara, H., and Krapp, A. (2012). The Arabidopsis Nitrate Transporter NRT2.4 Plays a Double Role in Roots and Shoots of Nitrogen-Straved Plants. Plant Cell 24, 245-258.

Legland, D., Devaux, M.F., Bouchet, B., Guillon, F., and Lahaye, M. (2012). Cartography of cell morphology in tomato pericarp at the fruit scale. J Microsc.

Le Masson I, Jauvion V, Bouteiller N, Rivard M, Elmayan T, Vaucheret H. Mutations in the Arabidopsis H3K4me2/3 Demethylase JMJ14 Suppress Posttranscriptional Gene Silencing by Decreasing Transgene Transcription. Plant Cell. 2012 Sep;24(9):3603-12. doi: 10.1105/tpc.112.103119. Epub 2012 Sep 21.

Lloyd, A.H., Wang, D., and Timmis, J.N. (2012). Single Molecule PCR Reveals Similar Patterns of Non-Homologous DSB Repair in Tobacco and Arabidopsis. PloS one 7.

Mameri, H., Bouchez, I., Pecquet, C., Raison-Peyron, N., Choudat, D., Chabane, H., Kerre, S., Denery-Papini, S., Gohon, Y., Briozzo, P., Lauriere, M., and Snegaroff, J. (2012). A Recombinant omega-Gliadin-like D-Type Glutenin and an alpha-Gliadin from Wheat (Triticum aestivum): Two Immunoglobulin E Binding Proteins, Useful for the Diagnosis of Wheat-Dependent Allergies. Journal of agricultural and food chemistry 60, 8059-8068.

Mameri, H., Snegaroff, J., Gohon, Y., Pecquet, C., Choudat, D., Raison-Peyron, N., Denery-Papini, S., Wien, F., and Briozzo, P. (2012). Immunoglobulin-E Reactivity and Structural Analysis of Wheat Low-Molecular-Weight Glutenin Subunits and Their Repetitive and Nonrepetitive Halves. Journal of agricultural and food chemistry.

Moreau, M., Azzopardi, M., Clement, G., Dobrenel, T., Marchive, C., Renne, C., Martin-Magniette, M.L., Taconnat, L., Renou, J.P., Robaglia, C., and Meyer, C. (2012). Mutations in the Arabidopsis homolog of LST8/GbetaL, a partner of the target of Rapamycin kinase, impair plant growth, flowering, and metabolic adaptation to long days. Plant Cell 24, 463-481.

Naseer, S., Lee, Y., Lapierre, C., Franke, R., Nawrath, C., and Geldner, N. (2012). Casparian strip diffusion barrier in Arabidopsis is made of a lignin polymer without suberin. Proceedings of the National Academy of Sciences of the United States of America 109, 10101-10106.

Nicolas, S.D., Monod, H., Eber, F., Chevre, A.M., and Jenczewski, E. (2012). Non-random distribution of extensive chromosome rearrangements in Brassica napus depends on genome organization. Plant J 70, 691-703.

Pacurar, D.I., Pacurar, M.L., Street, N., Bussell, J.D., Pop, T.I., Gutierrez, L., and Bellini, C. (2012). A collection of INDEL markers for map-based cloning in seven Arabidopsis accessions. Journal of Experimental Botany 63, 2491-2501.

Parent JS, Martínez de Alba AE, Vaucheret H. The origin and effect of small RNA signaling in plants. Front Plant Sci. 2012;3:179. Epub 2012 Aug 9.

Peaucelle, A., Braybrook, S., and Hofte, H. (2012). Cell wall mechanics and growth control in plants: the role of pectins revisited. Front Plant Sci 3, 121.

Pineau C., Loubet S., Lefoulon C., Chalies C., Fizames C., Lacombe B., Ferrand M., Loudet O., Berthomieu P., Richard O. (2012)  Natural variation at the FRD3 MATE transporter locus reveals cross-talk between Fe homeostasis and Zn tolerance in Arabidopsis thaliana. PLoS Genetics  8(12): e1003120

Pochon S, Terrasson E, Guillemette T, Iacomi-Vasilescu B, Georgeault S, Juchaux M, Berruyer R, Debeaujon I, Simoneau P, Campion C (2012) The Arabidopsis thaliana - Alternaria brassicicola pathosystem: a model interaction for investigating seed transmission of necrotrophic fungi. Plant Methods 8, 16

Poormohammad Kiani, S., Trontin, C., Andreatta, M., Simon, M., Robert, T., Salt, D.E., and Loudet, O. (2012). Allelic heterogeneity and trade-off shape natural variation for response to soil micronutrient. PLoS genetics 8, e1002814.

Pribat, A., Sormani, R., Rousseau-Gueutin, M., Julkowska, M.M., Testerink, C., Joubes, J., Castroviejo, M., Laguerre, M., Meyer, C., Germain, V., and Rothan, C. (2012). A novel class of PTEN protein in Arabidopsis displays unusual phosphoinositide phosphatase activity and efficiently binds phosphatidic acid. Biochemical Journal 441, 161-171.

Rajjou, L., Duval, M., Gallardo, K., Catusse, J., Bally, J., Job, C., and Job, D. (2012). Seed Germination and Vigor. Annual Review of Plant Biology 63.

Richet, N., Afif, D., Tozo, K., Pollet, B., Maillard, P., Huber, F., Priault, P., Banvoy, J., Gross, P., Dizengremel, P., Lapierre, C., Perre, P., and Cabane, M. (2012). Elevated CO2 and/or ozone modify lignification in the wood of poplars (Populus tremula x alba). Journal of experimental botany 63, 4291-4301.

Richet, N., Tozo, K., Afif, D., Banvoy, J., Legay, S., Dizengremel, P., and Cabane, M. (2012). The response to daylight or continuous ozone of phenylpropanoid and lignin biosynthesis pathways in poplar differs between leaves and wood. Planta 236, 727-737.

Robaglia, C., Thomas, M., and Meyer, C. (2012). Sensing nutrient and energy status by SnRK1 and TOR kinases. Current opinion in plant biology 15, 301-307.

Romano, J.M., Dubos, C., Prouse, M.B., Wilkins, O., Hong, H., Poole, M., Kang, K.Y., Li, E., Douglas, C.J., Western, T.L., Mansfield, S.D., and Campbell, M.M. (2012). AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network. The New phytologist 195, 774-786.

Routaboul, J.M., Dubos, C., Beck, G., Marquis, C., Bidzinski, P., Loudet, O., and Lepiniec, L. (2012). Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis. J Exp Bot.

Rubio-Diaz, S., Perez-Perez, J.M., Gonzalez-Bayon, R., Munoz-Viana, R., Borrega, N., Mouille, G., Hernandez-Romero, D., Robles, P., Hofte, H., Ponce, M.R., and Micol, J.L. (2012). Cell Expansion-Mediated Organ Growth Is Affected by Mutations in Three EXIGUA Genes. PloS one 7.

Sibout, R., and Hofte, H. (2012). Plant cell biology: the ABC of monolignol transport. Current biology : CB 22, R533-535.

Simon, M., Simon, A., Martins, F., Botran, L., Tisne, S., Granier, F., Loudet, O., and Camilleri, C. (2012). DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions. Plant J 69, 1094-1101.

Snegaroff, J., Bouchez, I., Smaali, M.E., Pecquet, C., Raison-Peyron, N., Jolivet, P., and Lauriere, M. (2012). Barley gamma3-hordein: Glycosylation at an atypical site, disulfide bridge analysis, and reactivity with IgE from patients allergic to wheat. Biochimica et biophysica acta.

Thévenin, J., Dubos, C., Xu, W., Le Gourrierec, J., Kelemen, Z., Charlot, F., Nogue, F., Lepiniec, L., and Dubreucq, B. (2012). A new system for fast and quantitative analysis of heterologous gene expression in plants. New Phytol 193, 504-512.

To A, Joube J, Barthole G, Lécureuil A, Scagnelli A, Jasinski S, Lepiniec L, Baud S (2012) WRINKLED transcription factors orchestrate tissue-specific regulation of fatty acid biosynthesis in Arabidopsis. Plant Cell 24, 5007-5023

Truernit, E., Bauby, H., Belcram, K., Barthelemy, J., and Palauqui, J.C. (2012). OCTOPUS, a polarly localised membrane-associated protein, regulates phloem differentiation entry in Arabidopsis thaliana. Development 139, 1306-1315.

Uyttewaal, M., Burian, A., Alim, K., Landrein, B.T., Borowska-Wykret, D., Dedieu, A., Peaucelle, A., Ludynia, M., Traas, J., Boudaoud, A., Kwiatkowska, D., and Hamant, O. (2012). Mechanical Stress Acts via Katanin to Amplify Differences in Growth Rate between Adjacent Cells in Arabidopsis. Cell 149, 439-451.

Vaucheret, H., and Chupeau, Y. (2012). Ingested plant miRNAs regulate gene expression in animals. Cell Res 22, 3-5.

Vetter MM, Kronholm I, He F, Häweker H, Reymond M, Bergelson J, Robatzek S, de Meaux J. 2012 Flagellin perception varies quantitatively in Arabidopsis thaliana and its relatives. Mol Biol Evol. 29 1655-67

Vivancos, J., Spinner, L., Mazubert, C., Charlot, F., Paquet, N., Thareau, V., Dron, M., Nogue, F., and Charon, C. (2012). The function of the RNA-binding protein TEL1 in moss reveals ancient regulatory mechanisms of shoot development. Plant Molecular Biology 78, 323-336.

Wolf, S., and Greiner, S. (2012). Growth control by cell wall pectins. Protoplasma 249 Suppl 2, S169-175.

Wolf, S., Hematy, K., and Hofte, H. (2012). Growth control and cell wall signaling in plants. Annu Rev Plant Biol 63, 381-407.

Wolf, S., Mravec, J., Greiner, S., Mouille, G., and Hofte, H. (2012). Plant Cell Wall Homeostasis Is Mediated by Brassinosteroid Feedback Signaling. Current biology : CB.

Yelina NE, Choi K, Chelysheva L, Macaulay M, De Snoo B, Wijnker E, Miller N, Drouaud J, Grelon M, Copenhaver GP, et al (2012) Epigenetic remodeling of meiotic crossover frequency in Arabidopsis thaliana DNA methyltransferase mutants. PLoS genetics 8: e1002844

Yoshimoto, K. (2012). Beginning to understand autophagy, an intracellular self-degradation system in plants. Plant Cell Physiol 53, 1355-1365.

Zaffalon, V., Mukherjee, S.K., Reddy, V.S., Thompson, J.R., and Tepfer, M. (2012). A survey of geminiviruses and associated satellite DNAs in the cotton-growing areas of northwestern India. Archives of Virology 157, 483-495.

Zerjal, T., Rousselet, A., Mhiri, C., Combes, V., Madur, D., Grandbastien, M.A., Charcosset, A., and Tenaillon, M.I. (2012). Maize genetic diversity and association mapping using transposable element insertion polymorphisms. Theoretical and Applied Genetics 124, 1521-1537.

 

2011

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Adam, H., Marguerettaz, M., Qadri, R., Adroher, B., Richaud, F., Collin, M., Thuillet, A.C., Vigouroux, Y., Laufs, P., Tregear, J.W., and Jouannic, S. (2011). Divergent Expression Patterns of miR164 and CUP-SHAPED COTYLEDON Genes in Palms and Other Monocots: Implication for the Evolution of Meristem Function in Angiosperms. Molecular Biology and Evolution 28, 1439-1454.

Agrawal, G.K., Bourguignon, J., Rolland, N., Ephritikhine, G., Ferro, M., Jaquinod, M., Alexiou, K.G., Chardot, T., Chakraborty, N., Jolivet, P., Doonan, J.H., and Rakwal, R. (2011). Plant organelle proteomics: Collaborating for optimal cell function. Mass Spectrometry Reviews 30, 772-853

Alcazar, R., Reymond, M., Schmitz, G., and de Meaux, J. (2011). Genetic and evolutionary perspectives on the interplay between plant immunity and development. Current Opinion in Plant Biology 14, 378-384.

Allais, F., Lancelot, A., Pion, F., Mazeau, K., Méry, S., and Ducrot, P. (2011). Synthesis, molecular modeling and characterization of new polyphenolic dendronized polymers via ROMP. Polymer Preprints 52, 379.

Allais, F., Pla, T.J.L., and Ducrot, P.-H. (2011). An Access to Chiral ß-Benzyl-?-butyrolactones and Its Application to the Synthesis of Enantiopure (+)-Secoisolariciresinol, (-)-Secoisolariciresinol, and (-)-Enterolactone. Synthesis-Stuttgart, 1456-1464.

Arc, E., Galland, M., Cueff, G., Godin, B., Lounifi, I., Job, D., and Rajjou, L. (2011). Reboot the system thanks to protein post-translational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment. Proteomics 11, 1606-1618.

Arc E, Ogé L, Grappin P, Rajjou L (2011) Plant Seed: A Relevant Model to Study Aging Processes. in "The Field of Biological Aging: Past, Present and Future", Research Signpost, Olgun A Ed, pp 87-102

Arraouadi, S., Chardon, F., Huguet, T., Aouani, M.E., and Badri, M. (2011). QTLs mapping of morphological traits related to salt tolerance in Medicago truncatula. Acta Physiologiae Plantarum 33, 917-926.

Aubert, A., Marion, J., Boulogne, C., Bourge, M., Abreu, S., Bellec, Y., Faure, J.D., and Satiat-Jeunemaitre, B. (2011). Sphingolipids involvement in plant endomembrane differentiation: the BY2 case. Plant J 65, 958-971.

Bach, L., Gissot, L., Marion, J., Tellier, F., Moreau, P., Satiat-Jeunemaitre, B., Palauqui, J.C., Napier, J.A., and Faure, J.D. (2011). Very-long-chain fatty acids are required for cell plate formation during cytokinesis in Arabidopsis thaliana. J Cell Sci 124, 3223-3234.

Badri, M., Chardon, F., Huguet, T., and Aouani, M.E. (2011). Quantitative trait loci associated with drought tolerance in the model legume Medicago truncatula. Euphytica 181, 415-428.

Berger, N., Dubreucq, B., Roudier, F., Dubos, C., and Lepiniec, L. (2011). Transcriptional Regulation of Arabidopsis LEAFY COTYLEDON2 Involves RLE, a cis-Element That Regulates Trimethylation of Histone H3 at Lysine-27. The Plant cell 23, 4065-4078.

Berthet, S., Demont-Caulet, N., Pollet, B., Bidzinski, P., Cezard, L., Le Bris, P., Borrega, N., Herve, J., Blondet, E., Balzergue, S., Lapierre, C., and Jouanin, L. (2011). Disruption of LACCASE4 and 17 Results in Tissue-Specific Alterations to Lignification of Arabidopsis thaliana Stems. Plant Cell 23, 1124-1137.

Bilsborough, G.D., Runions, A., Barkoulas, M., Jenkins, H.W., Hasson, A., Galinha, C., Laufs, P., Hay, A., Prusinkiewicz, P., and Tsiantis, M. (2011). Model for the regulation of Arabidopsis thaliana leaf margin development. Proc Natl Acad Sci U S A 108, 3424-3429.

Bischoff, V., Desprez, T., Mouille, G., Vernhettes, S., Gonneau, M., and Hofte, H. (2011). Phytochrome regulation of cellulose synthesis in Arabidopsis. Current biology : CB 21, 1822-1827.

Bouxin, F., Baumberger, S., Renault, J.H., and Dole, P. (2011). Study of a specific lignin model: gamma-oxidation and how it influences the hydrolysis efficiency of alcohol-aldehyde dehydrogenation copolymers. Bioresour Technol 102, 5567-5573.

Boyer, F., Rameau, C., Pillot, J., De Saint-Germain, A., and Pouvreau, J. (2011). Nouveaux analogues de strigolactones spécifiquement actif sur le contrôle de la ramification des plantes agissant faiblement sur la germination des plantes parasites de type Orobanche, I. DIRV-11-0027, ed.

Brkljacic, J., Grotewold, E., Scholl, R., Mockler, T., Garvin, D.F., Vain, P., Brutnell, T., Sibout, R., Bevan, M., Budak, H., Caicedo, A.L., Gao, C.X., Gu, Y., Hazen, S.P., Holt, B.F., Hong, S.Y., Jordan, M., Manzaneda, A.J., Mitchell-Olds, T., Mochida, K., Mur, L.A.J., Park, C.M., Sedbrook, J., Watt, M., Zheng, S.J., and Vogel, J.P. (2011). Brachypodium as a Model for the Grasses: Today and the Future. Plant Physiology 157, 3-13.

Budar, F. & Fujii, S.,
2012. Cytonuclear Adaptation in Plants. In L. Marechal-Drouard, ed. Mitochondrial Genome Evolution, Advances in Botanical Research Volume 63. Elsevier, Pp. 99–126.

Budar, F., and Roux, F. (2011). The role of organelle genomes in plant adaptation: time to get to work! Plant Signal Behav 6, 635-639.

Canas, R.A., Amiour, N., Quillere, I., and Hirel, B. (2011). An integrated statistical analysis of the genetic variability of nitrogen metabolism in the ear of three maize inbred lines (Zea mays L.). Journal of experimental botany 62, 2309-2318.

Caranta, C., Aranda, M., Tepfer, M., and Lopez-Moya, J. (2011). Recent advances in plant virology. (Norfolk, UK: Caister Academic Press).

Castaings, L., Marchive, C., Meyer, C., and Krapp, A. (2011). Nitrogen signalling in Arabidopsis: how to obtain insights into a complex signalling network. J Exp Bot 62, 1391-1397.

Chan, J., Eder, M., Crowell, E.F., Hampson, J., Calder, G., and Lloyd, C. (2011). Microtubules and CESA tracks at the inner epidermal wall align independently of those on the outer wall of light-grown Arabidopsis hypocotyls. Journal of Cell Science 124, 1088-1094.

Chen, S., Nelson, M.N., Chv®vre, A.-M., Jenczewski, E., Li, Z., Mason, A.S., Meng, J., Plummer, J.A., Pradhan, A., Siddique, K.H.M., Snowdon, R.J., Yan, G., Zhou, W., and Cowling, W.A. (2011). Trigenomic Bridges for Brassica Improvement. Critical Reviews in Plant Sciences 30, 524-547.

Cottyn, B., Kollmann, A., Waffo-Teguo, P., and Ducrot, P.H. (2011). Rationalization and in vitro modeling of the chemical mechanisms of the enzymatic oxidation of phenolic compounds in planta: from flavonols and stilbenoids to lignins. Chemistry 17, 7282-7287.

Crowell, E.F., Timpano, H., Desprez, T., Franssen-Verheijen, T., Emons, A.M., Hofte, H., and Vernhettes, S. (2011). Differential regulation of cellulose orientation at the inner and outer face of epidermal cells in the Arabidopsis hypocotyl. Plant Cell 23, 2592-2605.

Culhaoglu, T., Zheng, D., Mechin, V., and Baumberger, S. (2011). Adaptation of the Carrez procedure for the purification of ferulic and p-coumaric acids released from lignocellulosic biomass prior to LC/MS analysis. Journal of chromatography. B, Analytical technologies in the biomedical and life sciences 879, 3017-3022.

Dechorgnat, J., Nguyen, C.T., Armengaud, P., Jossier, M., Diatloff, E., Filleur, S., and Daniel-Vedele, F. (2011). From the soil to the seeds: the long journey of nitrate in plants. J Exp Bot 62, 1349-1359.

Dobrenel, T., Marchive, C., Sormani, R., Moreau, M., Mozzo, M., Montane, M.H., Menand, B., Robaglia, C., and Meyer, C. (2011). Regulation of plant growth and metabolism by the TOR kinase. Biochem Soc Trans 39, 477-481.

Drouaud, J., and Mezard, C. (2011). Characterization of meiotic crossovers in pollen from Arabidopsis thaliana. Methods Mol Biol 745, 223-249.

Duroc, Y., Bouchez, D., and Pastuglia, M. (2011). The preprophase band and division site determination in land plants. In The Plant Cytoskeleton, B. Liu, ed (New York: Springer USA), pp. 145-186.

Feraru, E., Feraru, M.I., Kleine-Vehn, J., Martiniere, A., Mouille, G., Vanneste, S., Vernhettes, S., Runions, J., and Friml, J. (2011). PIN Polarity Maintenance by the Cell Wall in Arabidopsis. Current Biology 21, 338-343.

Frey, A., Effroy, D., Lefebvre, V., Seo, M., Perreau, F., Berger, A., Sechet, J., To, A., North, H.M., and Marion-Poll, A. (2011). Epoxycarotenoid cleavage by NCED5 fine-tunes ABA accumulation and affects seed dormancy and drought tolerance with other NCED family members. Plant J.

Germann, S., and Gaudin, V.
(2011). Mapping in vivo protein-DNA interactions in plants by DamID, a DNA adenine methylation-based method. In Plant Transcription Factors: Methods and Protocols, L. Yuan and S.E. Perry, eds (New York, USA: SPRINGER SCIENCE+BUSINESS MEDIA, LLC), pp. 307-321.

Gery, C., Zuther, E., Schulz, E., Legoupi, J., Chauveau, A., McKhann, H., Hincha, D.K., and Téoulé, E. (2011). Natural variation in the freezing tolerance of Arabidopsis thaliana: Effects of RNAi-induced CBF depletion and QTL localisation vary among accessions. Plant Science 180, 12-23.

Giraut, L., Falque, M., Drouaud, J., Pereira, L., Martin, O.C., and Mezard, C. (2011). Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes. PLoS genetics 7, e1002354.

Gohon, Y., Vindigni, J.D., Pallier, A., Wien, F., Celia, H., Giuliani, A., Tribet, C., Chardot, T., and Briozzo, P. (2011). High water solubility and fold in amphipols of proteins with large hydrophobic regions: Oleosins and caleosin from seed lipid bodies. Biochim Biophys Acta 1808, 706-716.

Grappin, P., Collet, B., Yang, H., Jallet, D., Oge, L., and Zubarev, R. (2011). New proteomic developments to analyze protein isomerization and their biological significance in plants. J Proteomics 74, 1475-1482.

Guenin, S., Mareck, A., Rayon, C., Lamour, R., Ndong, Y.A., Domon, J.M., Senechal, F., Fournet, F., Jamet, E., Canut, H., Percoco, G., Mouille, G., Rolland, A., Rusterucci, C., Guerineau, F., Van Wuytswinkel, O., Gillet, F., Driouich, A., Lerouge, P., Gutierrez, L., and Pelloux, J. (2011). Identification of pectin methylesterase 3 as a basic pectin methylesterase isoform involved in adventitious rooting in Arabidopsis thaliana. New Phytologist 192, 114-126.

Guillon, F., Larre, C., Petipas, F., Berger, A., Moussawi, J., Rogniaux, H., Santoni, A., Saulnier, L., Jamme, F., Miquel, M., Lepiniec, L., and Dubreucq, B. (2011). A comprehensive overview of grain development in Brachypodium distachyon variety Bd21. Journal of Experimental Botany in press.

Hasson, A., Plessis, A., Blein, T., Adroher, B., Grigg, S., Tsiantis, M., Boudaoud, A., Damerval, C., and Laufs, P. (2011). Evolution and Diverse Roles of the CUP-SHAPED COTYLEDON Genes in Arabidopsis Leaf Development. Plant Cell 23, 54-68.

Heidari, B., Matre, P., Nemie-Feyissa, D., Meyer, C., Rognli, O.A., Moller, S.G., and Lillo, C. (2011). Protein Phosphatase 2A B55 and A Regulatory Subunits Interact with Nitrate Reductase and Are Essential for Nitrate Reductase Activation. Plant Physiol 156, 165-172.

Heiss-Blanquet, S., Zheng, D., Ferreira, N.L., Lapierre, C., and Baumberger, S. (2011). Effect of pretreatment and enzymatic hydrolysis of wheat straw on cell wall composition, hydrophobicity and cellulase adsorption. Bioresource Technology 102, 5938-5946.

Hirsch, J., Misson, J., Crisp, P.A., David, P., Bayle, V., Estavillo, G.M., Javot, H., Chiarenza, S., Mallory, A.C., Maizel, A., Declerck, M., Pogson, B.J., Vaucheret, H., Crespi, M., Desnos, T., Thibaud, M.C., Nussaume, L., and Marin, E. (2011). A novel fry1 allele reveals the existence of a mutant phenotype unrelated to 5'->3' exoribonuclease (XRN) activities in Arabidopsis thaliana roots. PLoS One 6, e16724.

Jauvion, V., Mallory, A., and Vaucheret, H. (2011). Deciphering post-transcriptional gene silencing pathways through genetic screens. . In RNAi technology, R.K. Gaur, Y. Gafni, P. Sharma, and V.K. Gupta, eds (CRC press. Science publishers), pp. 17-46.

Jauvion, V., Mallory, A.C., and Vaucheret, H. (2011) Deciphering post-transcriptional gene silencing pathways through genetic screens. In RNAi technology. Gaur, R.K., Gafni, Y., Sharma, P., and Gupta, V.K. editors, CRC press. Science publishers, p17-46

Jenczewski, E., Mercier, R., Macaisne, N., and Mézard, C. (2011). Meiosis: recombination and the control of cell division. In Diversity of genomes in plants. (Springer-Verlag).

Job, D., Pelletier, G., and Pernollet, J.C. (2011). On the trail of domestications, migrations and invasions in agriculture Foreword. Comptes Rendus Biologies 334, 169-170.

Jolivet, P., Boulard, C., Bellamy, A., Valot, B., d'Andrea, S., Zivy, M., Nesi, N., and Chardot, T. (2011). Oil body proteins sequentially accumulate throughout seed development in Brassica napus. J Plant Physiol 168, 2015-2020.

Kamisugi, Y., Schaefer, D.G., Kozak, J., Charlot, F., Vrielynck, N., Hola, M., Angelis, K.J., Cuming, A.C., and Nogue, F. (2011). MRE11 and RAD50, but not NBS1, are essential for gene targeting in the moss Physcomitrella patens. Nucleic Acids Res.

Kopecny, D., Tylichova, M., Snegaroff, J., Popelkova, H., and Sebela, M. (2011). Carboxylate and aromatic active-site residues are determinants of high-affinity binding of omega-aminoaldehydes to plant aminoaldehyde dehydrogenases. Febs Journal 278, 3130-3139.

Krapp, A., Berthome, R., Orsel, M., Mercey-Boutet, S., Yu, A., Castaings, L., Elftieh, S., Major, H., Renou, J.P., and Daniel-Vedele, F. (2011). Arabidopsis roots and shoots show distinct temporal adaptation patterns toward nitrogen starvation. Plant physiology 157, 1255-1282.

Latrasse, D., Germann, S., Houba-Herin, N., Dubois, E., Bui-Prodhomme, D., Hourcade, D., Juul-Jensen, T., Le Roux, C., Majira, A., Simoncello, N., Granier, F., Taconnat, L., Renou, J.P., and Gaudin, V. (2011). Control of Flowering and Cell Fate by LIF2, an RNA Binding Partner of the Polycomb Complex Component LHP1. Plos One 6, 17.

Lebrun, J.D., Demont-Caulet, N., Cheviron, N., Laval, K., Trinsoutrot-Gattin, I., and Mougin, C. (2011). Secretion profiles of fungi as potential tools for metal ecotoxicity assessment: a study of enzymatic system in Trametes versicolor. Chemosphere 82, 340-345.

Lefebvre, V., Fortabat, M.N., Ducamp, A., North, H.M., Maia-Grondard, A., Trouverie, J., Boursiac, Y., Mouille, G., and Durand-Tardif, M. (2011). ESKIMO1 Disruption in Arabidopsis Alters Vascular Tissue and Impairs Water Transport. Plos One 6, 13.

Libeau, P., Durandet, M., Granier, F., Marquis, C., Berthomé, R., Renou, J., Taconnat-Soubirou, L., and Horlow, C. (2011). Gene expression profiling of Arabidopsis meiocytes. Plant Biol (Stuttg) 13, 784-793.

Llorens, C., Futami, R., Covelli, L., Dominguez-Escriba, L., Viu, J.M., Tamarit, D., Aguilar-Rodriguez, J., Vicente-Ripolles, M., Fuster, G., Bernet, G.P., Maumus, F., Munoz-Pomer, A., Sempere, J.M., Latorre, A., and Moya, A. (2011). The Gypsy Database (GyDB) of mobile genetic elements: release 2.0. Nucleic Acids Research 39, D70-D74.

Lothier, J., Gaufichon, L., Sormani, R., Lemaitre, T., Azzopardi, M., Morin, H., Chardon, F., Reisdorf-Cren, M., Avice, J.C., and Masclaux-Daubresse, C. (2011). The cytosolic glutamine synthetase GLN1;2 plays a role in the control of plant growth and ammonium homeostasis in Arabidopsis rosettes when nitrate supply is not limiting. J Exp Bot 62, 1375-1390.

Maaroufi-Dguimi, H., Debouba, M., Gaufichon, L., Clement, G., Gouia, H., Hajjaji, A., and Suzuki, A. (2011). An Arabidopsis mutant disrupted in ASN2 encoding asparagine synthetase 2 exhibits low salt stress tolerance. Plant Physiology and Biochemistry 49, 623-628.

Macaisne, N., Vignard, J., and Mercier, R. (2011). SHOC1 and PTD form an XPF-ERCC1-like complex that is required for formation of class I crossovers. J Cell Sci 124, 2687-2691.

Marimuthu, M.P., Jolivet, S., Ravi, M., Pereira, L., Davda, J.N., Cromer, L., Wang, L., Nogue, F., Chan, S.W., Siddiqi, I., and Mercier, R. (2011). Synthetic clonal reproduction through seeds. Science 331, 876.

Markham, J.E., Molino, D., Gissot, L., Bellec, Y., Hematy, K., Marion, J., Belcram, K., Palauqui, J.C., Satiat-JeuneMaitre, B., and Faure, J.D. (2011). Sphingolipids Containing Very-Long-Chain Fatty Acids Define a Secretory Pathway for Specific Polar Plasma Membrane Protein Targeting in Arabidopsis. Plant Cell 23, 2362-2378.

Martínez de Alba AE, Jauvion V, Mallory AC, Bouteiller N, Vaucheret H. The miRNA pathway limits AGO1 availability during siRNA-mediated PTGS defense against exogenous RNA. Nucleic Acids Res. 2011 Nov;39(21):9339-44.

Masclaux-Daubresse, C., and Chardon, F. (2011). Exploring nitrogen remobilization for seed filling using natural variation in Arabidopsis thaliana. J Exp Bot 62, 2131-2142.

Matiolli, C.C., Tomaz, J.P., Duarte, G.T., Prado, F.M., Del Bem, L.E., Silveira, A.B., Gauer, L., Corrv™a, L.G., Drumond, R.D., Viana, A.J., Di Mascio, P., Meyer, C., and Vincentz, M. (2011). The Arabidopsis bZIP Gene AtbZIP63 Is a Sensitive Integrator of Transient Abscisic Acid and Glucose Signals. Plant physiology 157, 692-705.

Maunoury, N., and Vaucheret, H. (2011). AGO1 and AGO2 Act Redundantly in miR408-Mediated Plantacyanin Regulation. PloS one 6, e28729.

Méchin, V., Riboule, t.C., Guillaumie, S., and Barrière, Y. (2011). Investigating maize cell wall traits for improvement of silage and biofuel production in Europe. In Advances in maize, J. Prioul, ed

Melser, S., Molino, D., Batailler, B., Peypelut, M., Laloi, M., Wattelet-Boyer, V., Bellec, Y., Faure, J.D., and Moreau, P. (2011). Links between lipid homeostasis, organelle morphodynamics and protein trafficking in eukaryotic and plant secretory pathways. Plant Cell Rep 30, 177-193.

Miquel, M., Nesi, N., Paris, N., Larre, C., Quinsac, A., Savoire, R., Lanoiselle, J.-L., Jolivet, P., and Chardot , T. (2011). A continuum of research projects to improve extraction of oil and proteins in oilseed plants. Oléagineux Corps gras Lipides 18, 168-172.

Mravec, J., Petrasek, J., Li, N., Boeren, S., Karlova, R., Kitakura, S., Parezova, M., Naramoto, S., Nodzynski, T., Dhonukshe, P., Bednarek, S.Y., Zazimalova, E., de Vries, S., and Friml, J. (2011). Cell Plate Restricted Association of DRP1A and PIN Proteins Is Required for Cell Polarity Establishment in Arabidopsis. Current Biology 21, 1055-1060.

Päcurar, D.I., Thordal-Christensen, H., Päcurar, M.L., Pamfil, D., Botez, C., and Bellini, C. (2011). Agrobacterium tumefaciens: From crown gall tumors to genetic transformation. Physiological and Molecular Plant Pathology 76, 76-81.

Palauqui, J.C., and Laufs, P. (2011). Phyllotaxis: in search of the golden angle. Curr Biol 21, R502-504.

Parisod, C., A, S., Ainouche, M., and Grandbastien, M. (2011). Detecting epigenetic effects of transposable elements in plants. In Epigenetic phenomena in plants: understanding and analysis (Springer), pp. in press.

Peaucelle, A., Braybrook, S.A., Le Guillou, L., Bron, E., Kuhlemeier, C., and Hofte, H. (2011). Pectin-Induced Changes in Cell Wall Mechanics Underlie Organ Initiation in Arabidopsis. Curr Biol 21, 1720-1726.

Peaucelle, A., Louvet, R., Johansen, J.N., Salsac, F., Morin, H., Fournet, F., Belcram, K., Gillet, F., Hofte, H., Laufs, P., Mouille, G., and Pelloux, J. (2011). The transcription factor BELLRINGER modulates phyllotaxis by regulating the expression of a pectin methylesterase in Arabidopsis. Development 138, 4733-4741.

Pelissier, T., Clavel, M., Chaparro, C., Pouch-Pelissier, M.N., Vaucheret, H., and Deragon, J.M. (2011). Double-stranded RNA binding proteins DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels in Arabidopsis. RNA 17, 1502-1510.

Planchet, E., Rannou, O., Ricoult, C., Boutet-Mercey, S., Maia-Grondard, A., and Limami, A.M. (2011). Nitrogen metabolism responses to water deficit act through both abscisic acid (ABA)-dependent and independent pathways in Medicago truncatula during post-germination. Journal of Experimental Botany 62, 605-615.

Plessis, A., Cournol, R., Effroy, D., Perez, V.S., Botran, L., Kraepiel, Y., Frey, A., Sotta, B., Cornic, G., Leung, J., Giraudat, J., Marion-Poll, A., and North, H.M. (2011). New ABA-Hypersensitive Arabidopsis Mutants Are Affected in Loci Mediating Responses to Water Deficit and Dickeya dadantii Infection. Plos One 6, 13.

Pop, T.I., Pamfil, D., and Bellini, C. (2011). Auxin Control in the Formation of Adventitious Roots. Notulae Botanicae Horti Agrobotanici Cluj-Napoca 39, 307-316.

Popluechai, S., Froissard, M., Jolivet, P., Breviario, D., Gatehouse, A.M., O'Donnell, A.G., Chardot, T., and Kohli, A. (2011). Jatropha curcas oil body proteome and oleosins: L-form JcOle3 as a potential phylogenetic marker. Plant Physiol Biochem 49, 352-356.

Pouteau, S., and Albertini, C. (2011). An assessment of morphogenetic fluctuation during reproductive phase change in Arabidopsis. Ann Bot 107, 1017-1027.

Pouvreau, B., Baud, S., Vernoud, V., Morin, V., Py, C., Gendrot, G., Pichon, J.P., Rouster, J., Paul, W., and Rogowsky, P.M. (2011). Duplicate maize wrinkled1 transcription factors activate target genes involved in seed oil biosynthesis. Plant Physiol 156, 674-686.

Prioul, J., Damerval, C., Manicacci, D., and Méchin, V. (2011). Proteomics in identifying new regulatory mechanisms involved in seed development and ultimately seed quality. In Seed Development: OMICS Technologies toward Improvement of Seed Quality and Crop Yield, A.G.a.R. R, ed (Springer (The Netherlands).

Proust, H., Hoffmann, B., Xie, X., Yoneyama, K., Schaefer, D.G., Nogue, F., and Rameau, C. (2011). Strigolactones regulate protonema branching and act as a quorum sensing-like signal in the moss Physcomitrella patens. Development 138, 1531-1539.

Ragni, L., Nieminen, K., Pacheco-Villalobos, D., Sibout, R., Schwechheimer, C., and Hardtke, C.S. (2011). Mobile Gibberellin Directly Stimulates Arabidopsis Hypocotyl Xylem Expansion. Plant Cell 23, 1322-1336.

Rajjou L, Belghazi M, Catusse J, Ogé L, Arc E, Godin B, Chibani K, Ali-Rachidi S, Collet B, Grappin P, Jullien M, Gallardo K, Job C, Job D (2011) Proteomics and posttranslational proteomics of seed dormancy and germination. Methods Mol Biol 773, 215-36

Renny-Byfield, S., Chester, M., Kovarik, A., Le Comber, S.C., Grandbastien, M.A., Deloger, M., Nichols, R.A., Macas, J., Novak, P., Chase, M.W., and Leitch, A.R. (2011). Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived Repetitive DNAs. Molecular Biology and Evolution 28, 2843-2854.

Richet, N., Afif, D., Huber, F.o., Pollet, B., Banvoy, J., El Zein, R., Lapierre, C., Dizengremel, P., Perré, P., and Cabané, M. (2011). Cellulose and lignin biosynthesis is altered by ozone in wood of hybrid poplar (Populus tremula—alba). Journal of Experimental Botany 62, 3575-3586.

Roux, F., Colome-Tatche, M., Edelist, C., Wardenaar, R., Guerche, P., Hospital, F., Colot, V., Jansen, R.C., and Johannes, F. (2011). Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature. Genetics 188, 1015-1017.

Shi, C.L., Stenvik, G.E., Vie, A.K., Bones, A.M., Pautot, V., Proveniers, M., Aalen, R.B., and Butenko, M.A. (2011). Arabidopsis Class I KNOTTED-Like Homeobox Proteins Act Downstream in the IDA-HAE/HSL2 Floral Abscission Signaling Pathway. Plant Cell 23, 2553-2567.

Simon, M., Simon, A., Martins, F., Botran, L., Tisne, S., Granier, F., Loudet, O., and Camilleri, C. (2011). DNA fingerprinting and new tools for fine-scale discrimination of Arabidopsis thaliana accessions. Plant J in press.

Sormani, R., Masclaux-Daubresse, C., Daniel-Vedele, F., and Chardon, F. (2011). Transcriptional Regulation of Ribosome Components Are Determined by Stress According to Cellular Compartments in Arabidopsis thaliana. PLoS ONE 6, e28070.

Sullivan, S., Ralet, M.C., Berger, A., Diatloff, E., Bischoff, V., Gonneau, M., Marion-Poll, A., and North, H.M. (2011). CESA5 is required for the synthesis of cellulose with a role in structuring the adherent mucilage of Arabidopsis seeds. Plant Physiol 156, 1725-1739.

Szadkowski, E., Eber, F., Huteau, V., Lode, M., Coriton, O., Jenczewski, E., and Chevre, A.M. (2011). Polyploid formation pathways have an impact on genetic rearrangements in resynthesized Brassica napus. New Phytologist 191, 884-894.

Tamasloukht, B., Lam, M., Martinez, Y., Tozo, K., Barbier, O., Jourda, C., Jauneau, A., Borderies, G., Balzergue, S., Renou, J.P., Huguet, S., Martinant, J.P., Tatout, C., Lapierre, C., Barriere, Y., Goffner, D., and Pichon, M. (2011). Characterization of a cinnamoyl-CoA reductase 1 (CCR1) mutant in maize: effects on lignification, fibre development, and global gene expression. Journal of Experimental Botany 62, 3837-3848.

Thévenin, J., Pollet, B., Letarnec, B., Saulnier, L., Gissot, L., Maia-Grondard, A., Lapierre, C., and Jouanin, L. (2011). The Simultaneous Repression of CCR and CAD, Two Enzymes of the Lignin Biosynthetic Pathway, Results in Sterility and Dwarfism in Arabidopsis thaliana. Mol Plant 4, 70-82.

Timpano, H.T., Bischoff, V., Desprez, T., Hofte, H., Gonneau, M., and Vernhettes, S. (2011). Dynamics and regulation of cellulose synthase machinery. Abstracts of Papers of the American Chemical Society 241.

Trontin, C., Tisne, S., Bach, L., and Loudet, O. (2011). What does Arabidopsis natural variation teach us (and does not teach us) about adaptation in plants? Curr Opin Plant Biol 14, 225-231.

Vaucheret, H. (2011). 2001, an odyssey of small RNAs. Biofutur 30, 32-34.

Vaucheret, H., and Chupeau, Y. (2011). Ingested plant miRNAs regulate gene expression in animals. Cell Research. doi:10.1038/cr.2011.

Vermachova, M., Purkrtova, Z., Santrucek, J., Jolivet, P., Chardot, T., and Kodicek, M. (2011). New protein isoforms identified within Arabidopsis thaliana seed oil bodies combining chymotrypsin/trypsin digestion and peptide fragmentation analysis. Proteomics 11, 3430-3434.

Vivancos, J., Spinner, L., Mazubert, C., Charlot, F., Paquet, N., Thareau, V., Dron, M., Nogue, F., and Charon, C. (2011). The function of the RNA-binding protein TEL1 in moss reveals ancient regulatory mechanisms of shoot development. Plant Mol Biol.

Wang, X.B., Jovel, J., Udomporn, P., Wang, Y., Wu, Q.F., Li, W.X., Gasciolli, V., Vaucheret, H., and Ding, S.W. (2011). The 21-Nucleotide, but Not 22-Nucleotide, Viral Secondary Small Interfering RNAs Direct Potent Antiviral Defense by Two Cooperative Argonautes in Arabidopsis thaliana. Plant Cell 23, 1625-1638.

Wilson, A., Punginelli, C., Couturier, M., Perreau, F., and Kirilovsky, D. (2011). Essential role of two tyrosines and two tryptophans on the photoprotection activity of the Orange Carotenoid Protein. Biochim Biophys Acta 1807, 293-301.

Zhang, Y., Culhaoglu, T., Pollet, B., Melin, C., Denoue, D., Barriere, Y., Baumberger, S., and Mechin, V. (2011). Impact of Lignin Structure and Cell Wall Reticulation on Maize Cell Wall Degradability. J Agric Food Chem 59, 10129-10135.

 

2010

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Adam, H., Marguerettaz, M., Qadri, R., Adroher, B., Richaud, F., Collin, M., Thuillet, A.-C., Vigouroux, Y., Laufs, P., Treager, J.C., and Jouannic, S.
(2010). Divergent expression patterns of miR164 and CUP-SHAPED COTYLEDON genes in palms and other monocots: implication for the evolution of meristem function in angiosperms. Mol Biol Evol in press.
Ainouche, M.L., and Jenczewski, E. (2010). Focus on polyploidy. New Phytol 186, 1-4.

Allais, F., Aouhansou, M., Majira, A., and Ducrot, P.H. (2010). Asymmetric Total Synthesis of Rugulactone, an alpha-Pyrone from Cryptocarya rugulosa. Synthesis-Stuttgart, 2787-2793.

Allais, F., and Ducrot, P.-H. (2010). Stereoselective Total Synthesis of (+)-Dodoneine. Synthesis-Stuttgart, 1649-1653.

Andrey, P., Kieu, K., Kress, C., Lehmann, G., Tirichine, L., Liu, Z., Biot, E., Adenot, P.G., Hue-Beauvais, C., Houba-Herin, N., Duranthon, V., Devinoy, E., Beaujean, N., Gaudin, V., Maurin, Y., and Debey, P. (2010). Statistical analysis of 3D images detects regular spatial distributions of centromeres and chromocenters in animal and plant nuclei. PLoS Comput Biol 6, e1000853.

Auger, B., Marnet, N., Gautier, V., Maia-Grondard, A., Leprince, F., Renard, M., Guyot, S., Nesi, N., and Routaboul, J.M. (2010). A Detailed Survey of Seed Coat Flavonoids in Developing Seeds of Brassica napus L. J Agric Food Chem 58, 6246-6256.

Baarends, W.M., and Mercier, R. (2010). Sisters dancing in meiosis. EMBO Rep 11, 76-78.

Bach, L., and Faure, J.D. (2010). Role of very-long-chain fatty acids in plant development, when chain length does matter. C R Biol 333, 361-370.

Barriere, Y., Mechin, V., Denoue, D., Bauland, C., and Laborde, J. (2010). QTL for Yield, Earliness, and Cell Wall Quality Traits in Topcross Experiments of the F838 x F286 Early Maize RIL Progeny. Crop Science 50, 1761-1772.

Baud, S., Bourrellier, A.B.F., Azzopardi, M., Berger, A., Dechorgnat, J., Daniel-Vedele, F., Lepiniec, L., Miquel, M., Rochat, C., Hodges, M., and Ferrario-Mery, S. (2010). PII is induced by WRINKLED1 and fine-tunes fatty acid composition in seeds of Arabidopsis thaliana. Plant Journal 64, 291-303.

Baud, S., and Lepiniec, L. (2010). Physiological and developmental regulation of seed oil production. Prog Lipid Res 49, 235-249.

Beauclair, L., Yu, A., and Bouche, N. (2010). microRNA-directed cleavage and translational repression of the copper chaperone for superoxide dismutase mRNA in Arabidopsis. Plant J 62, 454-462.

Bencharki, B., Boissinot, S., Revollon, S., Ziegler-Graff, V., Erdinger, M., Wiss, L., Dinant, S., Renard, D., Beuve, M., Lemaitre-Guillier, C., and Brault, V. (2010). Phloem Protein Partners of Cucurbit aphid borne yellows virus: Possible Involvement of Phloem Proteins in Virus Transmission by Aphids. Mol Plant Microbe Interact 23, 799-810.

Beneteau, J., Renard, D., Marche, L., Douville, E., Lavenant, L., Rahbe, Y., Dupont, D., Vilaine, F., and Dinant, S. (2010). Binding Properties of the N-Acetylglucosamine and High-Mannose N-Glycan PP2-A1 Phloem Lectin in Arabidopsis. Plant Physiol 153, 1345-1361.

Beveridge, C., and Rameau, C. (2010). The branching hormone, strigolactone. In Plant Hormones : Biosynthesis, Signal Transduction, Action! (Revised 3rd edition), P. Davies, ed (Springer.

Blein, T., Hasson, A., and Laufs, P. (2010). Leaf development: what it needs to be complex. Curr Opin Plant Biol 13, 75-82.

Bonhomme, S. (2010). Pollen Development And Ubiquitin Proteasome System. In Pollen: Structure, Types and Effects, B.J. Kaiser, ed (Hauppauge, NY, USA: NOVA Publishers.

Bouche, N. (2010). New insights into miR398 functions in Arabidopsis. Plant Signal Behav 5.

Bouchez-Mahiout, I., Boulenc, E., Snv©garoff, J., Choudat, D., Pecquet, C., Raison-Peyron, N., Vigan, M., Chabane, H., Dron-Gonzalves, M., Branlard, G., Tanis-Plant, S., and Lauriere, M. (2010). Immunoblotting analysis of wheat allergens: control of side reactions through wheat polypeptides naturally present in dried cow milk. Food and Agricultural Immunology 21, 237 - 251.

Bouchez-Mahiout, I., Pecquet, C., Kerre, S., Snegaroff, J., Raison-Peyron, N., and Lauriere, M. (2010). High molecular weight entities in industrial wheat protein hydrolysates are immunoreactive with IgE from allergic patients. J Agric Food Chem 58, 4207-4215.

Bouchez-Mahiout, I., Snegaroff, J., Tylichova, M., Pecquet, C., Branlard, G., and Lauriere, M. (2010). Low molecular weight glutenins in wheat-dependant, exercise-induced anaphylaxis: allergenicity and antigenic relationships with omega 5-gliadins. Int Arch Allergy Immunol 153, 35-45.

Bouxin, F., Baumberger, S., Pollet, B., Haudrechy, A., Renault, J.H., and Dole, P. (2010). Acidolysis of a lignin model: Investigation of heterogeneous catalysis using Montmorillonite clay. Bioresource Technology 101, 736-744.

Boyer, F.D., Dubois, J., Thoret, S., Dau, M., and Hanna, I. (2010). Synthesis and tubulin-binding properties of new allocolchicinoids. Bioorganic Chemistry 38, 149-158.

Broyart, C., Fontaine, J.X., Molinie, R., Cailleu, D., Terce-Laforgue, T., Dubois, F., Hirel, B., and Mesnard, F. (2010). Metabolic profiling of maize mutants deficient for two glutamine synthetase isoenzymes using 1H-NMR-based metabolomics. Phytochem Anal 21, 102-109.

Caboche, M. (2010). Specificities of plant development. C R Biol 333, 288-289.

Canas, R.A., Amiour, N., Quillere, I., and Hirel, B. (2010). An integrated statistical analysis of the genetic variability of nitrogen metabolism in the ear of three maize inbred lines (Zea mays L.). J Exp Bot in press.

Canas, R.A., Quillere, I., Lea, P.J., and Hirel, B. (2010). Analysis of amino acid metabolism in the ear of maize mutants deficient in two cytosolic glutamine synthetase isoenzymes highlights the importance of asparagine for nitrogen translocation within sink organs. Plant Biotechnol J 8, 966-978.

Chan, J., Crowell, E., Eder, M., Calder, G., Bunnewell, S., Findlay, K., Vernhettes, S., Hofte, H., and Lloyd, C. (2010). The rotation of cellulose synthase trajectories is microtubule dependent and influences the texture of epidermal cell walls in Arabidopsis hypocotyls. J Cell Sci 123, 3490-3495.

Chardon, F., Barthelemy, J., Daniel-Vedele, F., and Masclaux-Daubresse, C. (2010). Natural variation of nitrate uptake and nitrogen use efficiency in Arabidopsis thaliana cultivated with limiting and ample nitrogen supply. J Exp Bot 61, 2293-2302.

Chelysheva, L., Grandont, L., Vrielynck, N., le Guin, S., Mercier, R., and Grelon, M. (2010). An easy protocol for studying chromatin and recombination protein dynamics during Arabidopsis thaliana meiosis: immunodetection of cohesins, histones and MLH1. Cytogenet Genome Res 129, 143-153.

Chen, V.X., Boyer, F.D., Rameau, C., Retailleau, P., Vors, J.P., and Beau, J.M. (2010). Stereochemistry, total synthesis, and biological evaluation of the new plant hormone solanacol. Chemistry 16, 13941-13945.

Cifuentes, M., Eber, F., Lucas, M.O., Lode, M., Chevre, A.M., and Jenczewski, E. (2010). Repeated Polyploidy Drove Different Levels of Crossover Suppression between Homoeologous Chromosomes in Brassica napus Allohaploids. Plant Cell 22, 2265-2276.

Cifuentes, M., Grandont, L., Moore, G., Chevre, A.M., and Jenczewski, E. (2010). Genetic regulation of meiosis in polyploid species: new insights into an old question. New Phytol 186, 29-36.

Contesto, C., Milesi, S., Mantelin, S., Zancarini, A., Desbrosses, G., Varoquaux, F., Bellini, C., Kowalczyk, M., and Touraine, B. (2010). The auxin-signaling pathway is required for the lateral root response of Arabidopsis to the rhizobacterium Phyllobacterium brassicacearum. Planta 232, 1455-1470.

Crowell, E.F., Gonneau, M., Stierhof, Y.D., Hofte, H., and Vernhettes, S. (2010). Regulated trafficking of cellulose synthases. Current Opinion in Plant Biology 13, 700-705.

Crowell, E.F., Gonneau, M., Vernhettes, S., and Hofte, H. (2010). Regulation of anisotropic cell expansion in higher plants. C R Biol 333, 320-324.

Curvers, K., Seifi, H., Mouille, G., de Rycke, R., Asselbergh, B., Van Hecke, A., Vanderschaeghe, D., Hofte, H., Callewaert, N., Van Breusegem, F., and Hofte, M. (2010). Abscisic acid deficiency causes changes in cuticle permeability and pectin composition that influence tomato resistance to Botrytis cinerea. Plant Physiol 154, 847-860.

d'Erfurth, I., Cromer, L., Jolivet, S., Girard, C., Horlow, C., Sun, Y., To, J.P., Berchowitz, L.E., Copenhaver, G.P., and Mercier, R. (2010). The cyclin-A CYCA1;2/TAM is required for the meiosis I to meiosis II transition and cooperates with OSD1 for the prophase to first meiotic division transition. PLoS Genet 6, e1000989.

Daniel-Vedele, F., Krapp, A., and Kaiser, W. (2010). Cellular Biology of Nitrogen Metabolism and Signaling. In Cell Biology of Metals and Nutrients, R. Hell and R.-R. Mendel, eds (Berlin / Heidelberg: Springer), pp. 145-172.

Davison, J. (2010). GM plants: Science, politics and EC regulations. Plant Science 178, 94-98.

de Saint Germain, A., Braun, N., and Rameau, C. (2010). [Strigolactones, a novel class of plant hormones controlling branching]. Biol Aujourdhui 204, 43-49.

Debouba, M., Suzuki, A., Boutet, S., Ghorbel, M., and Gouia, H. (2010). Amino acid changes in leaves and roots of tomato (Solanum lycopersicon) during salt stress. Acta Botanica Gallica 157, 255-264.

Demont-Caulet, N., Lapierre, C., Jouanin, L., Baumberger, S., and Mechin, V. (2010). Arabidopsis peroxidase-catalyzed copolymerization of coniferyl and sinapyl alcohols: kinetics of an endwise process. Phytochemistry 71, 1673-1683.

Dinant, S., Bonnemain, J.L., Girousse, C., and Kehr, J. (2010). Phloem sap intricacy and interplay with aphid feeding. C R Biol 333, 504-515.

Dinant, S., and Lemoine, R. (2010). The phloem pathway: new issues and old debates. C R Biol 333, 307-319.

Dubos, C., Stracke, R., Grotewold, E., Weisshaar, B., Martin, C., and Lepiniec, L. (2010). MYB transcription factors in Arabidopsis. Trends Plant Sci 15, 573-581.

Dubreucq, B., Baud, S., Debeaujon, I., Dubos, C., Marion-Poll, A., Miquel, M., North, H., Rochat, C., Routaboul, J., and Lepiniec, L. (2010). Seed Development. In Plant Developmental Biology - Biotechnological Perspectives, E.C. Pua and M.R. Davey, eds (Springer-Verlag Berlin Heidelberg), pp. 341-359.

Fontaine, J.X., Molinie, R., Terce-Laforgue, T., Cailleu, D., Hirel, B., Dubois, F., and Mesnard, F. (2010). Use of H-1-NMR metabolomics to precise the function of the third glutamate dehydrogenase gene in Arabidopsis thaliana. C R Chimie 13, 453-458.

Galon, Y., Aloni, R., Nachmias, D., Snir, O., Feldmesser, E., Scrase-Field, S., Boyce, J.M., Bouche, N., Knight, M.R., and Fromm, H. (2010). Calmodulin-binding transcription activator 1 mediates auxin signaling and responds to stresses in Arabidopsis. Planta 232, 165-178.

Galpaz, N., and Reymond, M. (2010). Natural Variation in Arabidopsis thaliana Revealed a Genetic Network Controlling Germination Under Salt Stress. Plos One 5, 10.

Gaufichon, L., Reisdorf-Cren, M., Rothstein, S.J., Chardon, F., and Suzuki, A. (2010). Biological functions of asparagine synthetase in plants. Plant Science 179, 141-153.

Germann, S., and Gaudin, V. (2010). Mapping in vivo protein-DNA interactions in plants by DamID, a DNA adenine methylation-based method. In Plant Transcription Factors: Methods and Protocols, L. Yuan and S.E. Perry, eds (New York, USA: Springer Science & Business Media, LLC.

Giordanengo, P., Brunissen, L., Rusterucci, C., Vincent, C., van Bel, A., Dinant, S., Girousse, C., Faucher, M., and Bonnemain, J.L. (2010). Compatible plant-aphid interactions: how aphids manipulate plant responses. C R Biol 333, 516-523.

Grandbastien, M.-A. (2010). Plant transposable elements and plasticity of host genomes: the stress connection. In Genome Instability and Transgenerational Effects, I. Kovalchuk and O. Kovalchuk, eds (Hauppauge, NY, USA: Nova Science Publishers, Inc.), pp. 343-376.

Guiboileau, A., Sormani, R., Meyer, C., and Masclaux-Daubresse, C. (2010). Senescence and death of plant organs: nutrient recycling and developmental regulation. C R Biol 333, 382-391.

Guillaumie, S., Mzid, R., Mechin, V., Leon, C., Hichri, I., Destrac-Irvine, A., Trossat-Magnin, C., Delrot, S., and Lauvergeat, V. (2010). The grapevine transcription factor WRKY2 influences the lignin pathway and xylem development in tobacco. Plant Mol Biol 72, 215-234.

Guyon-Debast, A., Lecureuil, A., Bonhomme, S., Guerche, P., and Gallois, J.L. (2010). A SNP associated with alternative splicing of RPT5b causes unequal redundancy between RPT5a and RPT5b among Arabidopsis thaliana natural variation. BMC Plant Biol 10, 158.

Hamant, O., and Pautot, V. (2010). Plant development: a TALE story. C R Biol 333, 371-381.

Harscoet, E., Dubreucq, B., Palauqui, J.C., and Lepiniec, L. (2010). NOF1 encodes an arabidopsis protein involved in the control of rRNA expression. PLoS One 5, e12829.

Hasson, A., Blein, T., and Laufs, P. (2010). Leaving the meristem behind: the genetic and molecular control of leaf patterning and morphogenesis. C R Biol 333, 350-360.

Hernandez Mora, J.R., Rivals, E., Mireau, H., and Budar, F. (2010). Sequence analysis of two alleles reveals that intra-and intergenic recombination played a role in the evolution of the radish fertility restorer (Rfo). BMC Plant Biol 10, 35.

Hofte, H. (2010). Plant cell biology: how to pattern a wall. Curr Biol 20, R450-452.

Ikram, S., and Chardon, F. (2010). Plant Quantitative Traits. In Encyclopedia of Life Sciences (John Wiley & Sons, Ltd.

Jauvion, V., Elmayan, T., and Vaucheret, H. (2010). The conserved RNA trafficking proteins HPR1 and TEX1 are involved in the production of endogenous and exogenous small interfering RNA in Arabidopsis. Plant Cell 22, 2697-2709.

Keech, O., Pesquet, E., Gutierrez, L., Ahad, A., Bellini, C., Smith, S.M., and Gardestrom, P. (2010). Leaf senescence is accompanied by an early disruption of the microtubule network in Arabidopsis. Plant Physiol 154, 1710-1720.

Kohler, C., Gaudin, V., and Hennig, L. (2010). Green chromatin dynamics in Zurich: meeting summary based on the European Workshop on Plant Chromatin 2009 in Zurich, Switzerland. Epigenetics 5, 80-83.

Konan, K.E., Durand-Gasselin, T., Kouadio, Y.J., Flori, A., Rival, A., Duval, Y., and Pannetier, C. (2010). In vitro conservation of oil palm somatic embryos for 20 years on a hormone-free culture medium: characteristics of the embryogenic cultures, derived plantlets and adult palms. Plant Cell Rep 29, 1-13.

Kopecny, D., Briozzo, P., Popelkova, H., Sebela, M., Koncitikova, R., Spichal, L., Nisler, J., Madzak, C., Frebort, I., Laloue, M., and Houba-Herin, N. (2010). Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study. Biochimie 92, 1052-1062.

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Parisod, C., Alix, K., Just, J., Petit, M., Sarilar, V., Mhiri, C., Ainouche, M., Chalhoub, B., and Grandbastien, M.A. (2010). Impact of transposable elements on the organization and function of allopolyploid genomes. New Phytol 186, 37-45.

Pedrono, F., Blanchard, H., Kloareg, M., D'Andrea, S., Daval, S., Rioux, V., and Legrand, P. (2010). The fatty acid desaturase 3 gene encodes for different FADS3 protein isoforms in mammalian tissues. Journal of Lipid Research 51, 472-479.

Pelletier, G., and Morot-Gaudry, J.F. (2010). Foreword. Intriguing developmental biology questions raised by plant systems. C R Biol 333, 287.

Pelletier, S., Van Orden, J., Wolf, S., Vissenberg, K., Delacourt, J., Ndong, Y.A., Pelloux, J., Bischoff, V., Urbain, A., Mouille, G., Lemonnier, G., Renou, J.P., and Hofte, H. (2010). A role for pectin de-methylesterification in a developmentally regulated growth acceleration in dark-grown Arabidopsis hypocotyls. New Phytol 188, 726-739.

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Sanchez-Rodriguez, C., Rubio-Somoza, I., Sibout, R., and Persson, S. (2010). Phytohormones and the cell wall in Arabidopsis during seedling growth. Trends Plant Sci 15, 291-301.

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Simon, A., and Biot, E. (2010). ANAIS: analysis of NimbleGen arrays interface. Bioinformatics 26, 2468-2469.

Spinner, L., Pastuglia, M., Belcram, K., Pegoraro, M., Goussot, M., Bouchez, D., and Schaefer, D.G. (2010). The function of TONNEAU1 in moss reveals ancient mechanisms of division plane specification and cell elongation in land plants. Development 137, 2733-2742.

Stevenin, A., Boyer, F.D., and Beau, J.M. (2010). Regioselective Control in the Oxidative Cleavage of 4,6-O-Benzylidene Acetals of Glycopyranosides by Dimethyldioxirane. Journal of Organic Chemistry 75, 1783-1786.

Stranska, J., Tylichova, M., Kopecny, D., Snegaroff, J., and Sebela, M. (2010). Biochemical characterization of pea ornithine-delta-aminotransferase: Substrate specificity and inhibition by di- and polyamines. Biochimie 92, 940-948.

Szadkowski, E., Eber, F., Huteau, V., Lode, M., Huneau, C., Belcram, H., Coriton, O., Manzanares-Dauleux, M.J., Delourme, R., King, G.J., Chalhoub, B., Jenczewski, E., and Chevre, A.M. (2010). The first meiosis of resynthesized Brassica napus, a genome blender. New Phytol 186, 102-112.

Thompson, J.R., and Tepfer, M. (2010). Assessment of the benefits and risks for engineered virus resistance. Adv Virus Res 76, 33-56.

Tronchet, M., Balague, C., Kroj, T., Jouanin, L., and Roby, D. (2010). Cinnamyl alcohol dehydrogenases-C and D, key enzymes in lignin biosynthesis, play an essential role in disease resistance in Arabidopsis. Molecular Plant Pathology 11, 83-92.

Tylichova, M., Kopecny, D., Morera, S., Briozzo, P., Lenobel, R., Snegaroff, J., and Sebela, M. (2010). Structural and functional characterization of plant aminoaldehyde dehydrogenase from Pisum sativum with a broad specificity for natural and synthetic aminoaldehydes. J Mol Biol 396, 870-882.

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Wingler, A., Purdy, S.J., Edwards, S.A., Chardon, F., and Masclaux-Daubresse, C. (2010). QTL analysis for sugar-regulated leaf senescence supports flowering-dependent and -independent senescence pathways. New Phytol 185, 420-433.

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Yu, B., Bi, L., Zhai, J., Agarwal, M., Li, S., Wu, Q., Ding, S.W., Meyers, B.C., Vaucheret, H., and Chen, X. (2010). siRNAs compete with miRNAs for methylation by HEN1 in Arabidopsis. Nucleic Acids Res 38, 5844-5850.

 

2009

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Feria Bourrellier, A.B., Ferrario-Mery, S., Vidal, J., and Hodges, M. (2009). Metabolite regulation of the interaction between Arabidopsis thaliana PII and N-acetyl-l-glutamate kinase. Biochem Biophys Res Commun 387, 700-704.

Abasolo, W., Eder, M., Yamauchi, K., Obel, N., Reinecke, A., Neumetzler, L., Dunlop, J.W., Mouille, G., Pauly, M., Hofte, H., and Burgert, I. (2009). Pectin may hinder the unfolding of xyloglucan chains during cell deformation: implications of the mechanical performance of Arabidopsis hypocotyls with pectin alterations. Mol Plant 2, 990-999.

Ainouche, M., Fortune, P., Salmon, A., Parisod, C., Grandbastien, M.A., Fukunaga, K., Ricou, M., and Misset, M.T. (2009). Hybridization, polyploidy and invasion: lessons from Spartina (Poaceae). Biological Invasions 11, 1159-1173.

Allais, F., Martinet, S., and Ducrot, P.H. (2009). Straightforward Total Synthesis of 2-O-Feruloyl-L-malate, 2-O-Sinapoyl-L-malate and 2-O-5-Hydroxyferuloyl-L-malate. Synthesis-Stuttgart, 3571-3578.

Assor, C., Placet, V., Chabbert, B., Habrant, A., Lapierre, C., Pollet, B., and Perre, P. (2009). Concomitant Changes in Viscoelastic Properties and Amorphous Polymers during the Hydrothermal Treatment of Hardwood and Softwood. Journal of Agricultural and Food Chemistry 57, 6830-6837.

Atta, R., Laurens, L., Boucheron-Dubuisson, E., Guivarc'h, A., Carnero, E., Giraudat-Pautot, V., Rech, P., and Chriqui, D. (2009). Pluripotency of Arabidopsis xylem pericycle underlies shoot regeneration from root and hypocotyl explants grown in vitro. Plant J 57, 626-644.

Balasubramanian, S., Schwartz, C., Singh, A., Warthmann, N., Kim, M.C., Maloof, J.N., Loudet, O., Trainer, G.T., Dabi, T., Borevitz, J.O., Chory, J., and Weigel, D. (2009). QTL mapping in new Arabidopsis thaliana advanced intercross-recombinant inbred lines. PLoS One 4, e4318.

Barriere, Y., Mechin, V., Riboulet, C., Guillaumie, S., Thomas, J., Bosio, M., Fabre, F., Goffner, D., Pichon, M., Lapierre, C., and Martinant, J.P. (2009). Genetic and genomic approaches for improving biofuel production from maize. Euphytica 170, 183-202.

Baud S, Wuillème S, To A, Rochat, C, Lepiniec L (2009) Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis. Plant J 60, 933-947

Baud, S., and Lepiniec, L. (2009). Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis. Plant Physiol Biochem 47, 448-455.

Baud, S., Wuilleme, S., To, A., Rochat, C., and Lepiniec, L. (2009). Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis. Plant J 60, 933-947.

Ben Amor, B., Wirth, S., Merchan, F., Laporte, P., d'Aubenton-Carafa, Y., Hirsch, J., Maizel, A., Mallory, A., Lucas, A., Deragon, J.M., Vaucheret, H., Thermes, C., and Crespi, M. (2009). Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses. Genome Res 19, 57-69.

Beopoulos, A., Chardot, T., and Nicaud, J.M. (2009). Yarrowia lipolytica: A model and a tool to understand the mechanisms implicated in lipid accumulation. Biochimie 91, 692-696.

Betz, G.A., Knappe, C., Lapierre, C., Olbrich, M., Welzl, G., Langebartels, C., Heller, W., Sandermann, H., and Ernst, D. (2009). Ozone affects shikimate pathway transcripts and monomeric lignin composition in European beech (Fagus sylvatica L.). European Journal of Forest Research 128, 109-116.

Beveridge, C.A., Dun, E.A., and Rameau, C. (2009). Pea has its tendrils in branching discoveries spanning a century from auxin to strigolactones. Plant Physiol 151, 985-990.

Bikard, D., Patel, D., Le Mette, C., Giorgi, V., Camilleri, C., Bennett, M.J., and Loudet, O. (2009). Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana. Science 323, 623-626.

Blein, T. (2009). [A conserved mechanism at the base of leaf dissection]. Med Sci (Paris) 25, 891-893.

Blein, T., Hasson, A., and Laufs, P. (2009). Leaf development: what it needs to be complex. Curr Opin Plant Biol 13, 75-82.

Brewer, P.B., Dun, E.A., Ferguson, B.J., Rameau, C., and Beveridge, C.A. (2009). Strigolactone acts downstream of auxin to regulate bud outgrowth in pea and Arabidopsis. Plant Physiol 150, 482-493.

Broyart, C., Fontaine, J.X., Molinie, R., Cailleu, D., Terce-Laforgue, T., Dubois, F., Hirel, B., and Mesnard, F. (2010). Metabolic profiling of maize mutants deficient for two glutamine synthetase isoenzymes using 1H-NMR-based metabolomics. Phytochem Anal 21, 102-109.

Canas, R.A., Quillere, I., Christ, A., and Hirel, B. (2009). Nitrogen metabolism in the developing ear of maize (Zea mays): analysis of two lines contrasting in their mode of nitrogen management. New Phytol 184, 340-352.

Castaings, L., Camargo, A., Pocholle, D., Gaudon, V., Texier, Y., Boutet-Mercey, S., Taconnat, L., Renou, J.P., Daniel-Vedele, F., Fernandez, E., Meyer, C., and Krapp, A. (2009). The nodule inception-like protein 7 modulates nitrate sensing and metabolism in Arabidopsis. Plant J 57, 426-435.

Cosgrove, D.J., Fincher, G., and Hofte, H. (2009). Plants and the State of the Union. Editorial. Mol Plant 2, 839.

Crowell, E.F., Bischoff, V., Desprez, T., Rolland, A., Stierhof, Y.D., Schumacher, K., Gonneau, M., Hofte, H., and Vernhettes, S. (2009). Pausing of Golgi bodies on microtubules regulates secretion of cellulose synthase complexes in Arabidopsis. Plant Cell 21, 1141-1154.

Curtis, M.J., Belcram, K., Bollmann, S.R., Tominey, C.M., Hoffman, P.D., Mercier, R., and Hays, J.B. (2009). Reciprocal chromosome translocation associated with TDNA-insertion mutation in Arabidopsis: genetic and cytological analyses of consequences for gametophyte development and for construction of doubly mutant lines. Planta 229, 731-745.

d'Erfurth, I., Jolivet, S., Froger, N., Catrice, O., Novatchkova, M., and Mercier, R. (2009). Turning meiosis into mitosis. PLoS Biol 7, e1000124.

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de Muyt, A.D., Mercier, R., Mezard, C., and Grelon, M. (2009). Meiotic recombination and crossovers in plants. Genome Dyn 5, 14-25.

Debouba, M., Suzuki, A., Boutet, S., Ghorbel, M., and Gouia, H. (2009). Amino acid changes in leaves and roots of tomato (Solanum lycopersicon) during salt stress. Acta Botanica Gallica sous presse.

Dignac, M.F., Pechot, N., Thevenot, M., Lapierre, C., Bahri, H., Bardoux, G., and Rumpel, C. (2009). Isolation of soil lignins by combination of ball-milling and cellulolysis: Evaluation of purity and isolation efficiency with pyrolysis/GC/MS. Journal of Analytical and Applied Pyrolysis 85, 426-430.

Duroc, Y., Hiard, S., Vrielynck, N., Ragu, S., and Budar, F. (2009). The Ogura sterility-inducing protein forms a large complex without interfering with the oxidative phosphorylation components in rapeseed mitochondria. Plant Mol Biol 70, 123-137.

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Fontaine, J.X., Ravel, C., Pageau, K., Heumez, E., Dubois, F., Hirel, B., and Le Gouis, J. (2009). A quantitative genetic study for elucidating the contribution of glutamine synthetase, glutamate dehydrogenase and other nitrogen-related physiological traits to the agronomic performance of common wheat. Theor Appl Genet 119, 645-662.

Fornara, F., Panigrahi, K.C., Gissot, L., Sauerbrunn, N., Ruhl, M., Jarillo, J.A., and Coupland, G. (2009). Arabidopsis DOF transcription factors act redundantly to reduce CONSTANS expression and are essential for a photoperiodic flowering response. Dev Cell 17, 75-86.

Fowler, J.H., Narvaez-Vasquez, J., Aromdee, D.N., Pautot, V., Holzer, F.M., and Walling, L.L. (2009). Leucine aminopeptidase regulates defense and wound signaling in tomato downstream of jasmonic acid. Plant Cell 21, 1239-1251.

Froissard, M., D'Andrea, S., Boulard, C., and Chardot, T. (2009). Heterologous expression of AtClo1, a plant oil body protein, induces lipid accumulation in yeast. Fems Yeast Research 9, 428-438.

Gallois, J.L., Guyon-Debast, A., Lecureuil, A., Vezon, D., Carpentier, V., Bonhomme, S., and Guerche, P. (2009). The Arabidopsis proteasome RPT5 subunits are essential for gametophyte development and show accession-dependent redundancy. Plant Cell 21, 442-459.

Gaudin, V., Andrey, P., Devinoy, E., Kress, C., Kieu, K., Beaujean, N., Maurin, Y., and Debey, P. (2009). Modeling the 3D functional architecture of the nucleus in animal and plant kingdoms. C R Biol 332, 937-946.

Grienenberger, E., Besseau, S., Geoffroy, P., Debayle, D., Heintz, D., Lapierre, C., Pollet, B., Heitz, T., and Legrand, M. (2009). A BAHD acyltransferase is expressed in the tapetum of Arabidopsis anthers and is involved in the synthesis of hydroxycinnamoyl spermidines. Plant Journal 58, 246-259.

Guenin, S., Mauriat, M., Pelloux, J., Van Wuytswinkel, O., Bellini, C., and Gutierrez, L. (2009). Normalization of qRT-PCR data: the necessity of adopting a systematic, experimental conditions-specific, validation of references. J Exp Bot 60, 487-493.

Gutierrez, L., Bussell, J.D., Pacurar, D.I., Schwambach, J., Pacurar, M., and Bellini, C. (2009). Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance. Plant Cell 21, 3119-3132.

Johannes, F., Porcher, E., Teixeira, F.K., Saliba-Colombani, V., Simon, M., Agier, N., Bulski, A., Albuisson, J., Heredia, F., Audigier, P., Bouchez, D., Dillmann, C., Guerche, P., Hospital, F., and Colot, V. (2009). Assessing the impact of transgenerational epigenetic variation on complex traits. PLoS Genet 5, e1000530.

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Konan, K.E., Durand-Gasselin, T., Kouadio, Y.J., Flori, A., Rival, A., Duval, Y., and Pannetier, C. (2009). In vitro conservation of oil palm somatic embryos for 20 years on a hormone-free culture medium: characteristics of the embryogenic cultures, derived plantlets and adult palms. Plant Cell Rep 29, 1-13.

Labboun, S., Terce-Laforgue, T., Roscher, A., Bedu, M., Restivo, F.M., Velanis, C.N., Skopelitis, D.S., Moschou, P.N., Roubelakis-Angelakis, K.A., Suzuki, A., and Hirel, B. (2009). Resolving the role of plant glutamate dehydrogenase. I. In vivo real time nuclear magnetic resonance spectroscopy experiments. Plant Cell Physiol 50, 1761-1773.

Lachaud, C., Da Silva, D., Cotelle, V., Thuleau, P., Xiong, T.C., Jauneau, A., Briere, C., Graziana, A., Bellec, Y., Faure, J.D., Ranjeva, R., and Mazars, C. (2009). Nuclear calcium controls the apoptotic-like cell death induced by d-erythro-sphinganine in tobacco cells. Cell Calcium 47, 92-100.

Laufs, P., Peaucelle, A., and Hofte, H. (2009). Shaping the meristem by mechanical forces. F-1000, Biology reports 1, 45.

Lefebvre, V., Kiani, S.P., and Durand-Tardif, M. (2009). A Focus on Natural Variation for Abiotic Constraints Response in the Model Species Arabidopsis thaliana. Int J Mol Sci 10, 3547-3582.

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Loulakakis, K., Morot-Gaudry, J., Velanis, C., Skopelitis, D., Moschou, P., Hire, l.B., and Roubelakis-Angelakis, K. (2009). Advancements in nitrogen metabolism in grapevine. In : Grapevine molecular physiology and biotechnology. In Grapevine molecular physiology and biotechnology, K. Roubelakis-Angelakis, ed (Netherlands: Springer.

Lu, C., Xin, Z., Ren, Z., Miquel, M., and Browse, J. (2009). An enzyme regulating triacylglycerol composition is encoded by the ROD1 gene of Arabidopsis. Proc Natl Acad Sci U S A 106, 18837-18842.

Mallory, A.C., Hinze, A., Tucker, M.R., Bouche, N., Gasciolli, V., Elmayan, T., Lauressergues, D., Jauvion, V., Vaucheret, H., and Laux, T. (2009). Redundant and specific roles of the ARGONAUTE proteins AGO1 and ZLL in development and small RNA-directed gene silencing. PLoS Genet 5, e1000646.

Mallory, A.C., and Vaucheret, H. (2009). ARGONAUTE 1 homeostasis invokes the coordinate action of the microRNA and siRNA pathways. EMBO Rep 10, 521-526.

Manetti, M.E., Rossi, M., Nakabashi, M., Grandbastien, M.A., and Van Sluys, M.A. (2009). The Tnt1 family member Retrosol copy number and structure disclose retrotransposon diversification in different Solanum species. Mol Genet Genomics 281, 261-271.

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Martin, A., Troadec, C., Boualem, A., Rajab, M., Fernandez, R., Morin, H., Pitrat, M., Dogimont, C., and Bendahmane, A. (2009). A transposon-induced epigenetic change leads to sex determination in melon. Nature 461, 1135-1138.

Matakiadis, T., Alboresi, A., Jikumaru, Y., Tatematsu, K., Pichon, O., Renou, J.P., Kamiya, Y., Nambara, E., and Truong, H.N. (2009). The Arabidopsis abscisic acid catabolic gene CYP707A2 plays a key role in nitrate control of seed dormancy. Plant Physiol 149, 949-960.

Matre, P., Meyer, C., and Lillo, C. (2009). Diversity in subcellular targeting of the PP2A B'eta subfamily members. Planta 230, 935-945.

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Maumus, F., Allen, A.E., Mhiri, C., Hu, H., Jabbari, K., Vardi, A., Grandbastien, M.A., and Bowler, C. (2009). Potential impact of stress activated retrotransposons on genome evolution in a marine diatom. BMC Genomics 10, 624.

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Monachello, D., Allot M, Oliva S, Krapp A, Daniel-Vedele F, Barbier-Brygoo H, Ephritikhine G. (2009). Two anion transporters AtClCa and AtClCe fulfil interconnecting but not redundant roles in nitrate assimilation pathways. New Phytol 183, 88 -94.

Morse, A.M., Whetten, R.W., Dubos, C., and Campbell, M.M. (2009). Post-translational modification of an R2R3-MYB transcription factor by a MAP Kinase during xylem development. New Phytol 183, 1001-1013.

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Nelieu, S., Perreau, F., Bonnemoy, F., Ollitrault, M., Azam, D., Lagadic, L., Bohatier, J., and Einhorn, J. (2009). Sunlight nitrate-induced photodegradation of chlorotoluron: evidence of the process in aquatic mesocosms. Environ Sci Technol 43, 3148-3154.

Nesi, N., Lucas, M.O., Auger, B., Baron, C., Lecureuil, A., Guerche, P., Kronenberger, J., Lepiniec, L., Debeaujon, I., and Renard, M. (2009). The promoter of the Arabidopsis thaliana BAN gene is active in proanthocyanidin-accumulating cells of the Brassica napus seed coat. Plant Cell Rep 28, 601-617.

Nicolas, S.D., Leflon, M., Monod, H., Eber, F., Coriton, O., Huteau, V., Chevre, A.M., and Jenczewski, E. (2009). Genetic regulation of meiotic cross-overs between related genomes in Brassica napus haploids and hybrids. Plant Cell 21, 373-385.

Parisod, C., Alix, K., Just, J., Petit, M., Sarilar, V., Mhiri, C., Ainouche, M., Chalhoub, B., and Grandbastien, M.A. (2009). Impact of transposable elements on the organization and function of allopolyploid genomes. New Phytol 186, 37-45.

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Potel, F., Valadier, M.H., Ferrario-Mery, S., Grandjean, O., Morin, H., Gaufichon, L., Boutet-Mercey, S., Lothier, J., Rothstein, S.J., Hirose, N., and Suzuki, A. (2009). Assimilation of excess ammonium into amino acids and nitrogen translocation in Arabidopsis thaliana--roles of glutamate synthases and carbamoylphosphate synthetase in leaves. FEBS J 276, 4061-4076.

Pouteau, S., and Albertini, C. (2009). The significance of bolting and floral transitions as indicators of reproductive phase change in Arabidopsis. J Exp Bot 60, 3367-3377.

Punginelli, C., Wilson, A., Routaboul, J.M., and Kirilovsky, D. (2009). Influence of zeaxanthin and echinenone binding on the activity of the orange carotenoid protein. Biochim Biophys Acta 1787, 280-288.

Quentin, M., Allasia, V., Pegard, A., Allais, F., Ducrot, P.H., Favery, B., Levis, C., Martinet, S., Masur, C., Ponchet, M., Roby, D., Schlaich, N.L., Jouanin, L., and Keller, H. (2009). Imbalanced lignin biosynthesis promotes the sexual reproduction of homothallic oomycete pathogens. PLoS Pathog 5, e1000264.

Riboulet, C., Guillaumie, S., Mechin, V., Bosio, M., Pichon, M., Goffner, D., Lapierre, C., Pollet, B., Lefevre, B., Martinant, J.P., and Barriere, Y. (2009). Kinetics of Phenylpropanoid Gene Expression in Maize Growing Internodes: Relationships with Cell Wall Deposition. Crop Science 49, 211-223.

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Ruel, K., Berrio-Sierra, J., Derikvand, M.M., Pollet, B., Thevenin, J., Lapierre, C., Jouanin, L., and Joseleau, J.P. (2009). Impact of CCR1 silencing on the assembly of lignified secondary walls in Arabidopsis thaliana. New Phytol 184, 99-113.

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Tanou, G., Job, C., Rajjou, L., Arc, E., Belghazi, M., Diamantidis, G., Molassiotis, A., and Job, D. (2009). Proteomics reveals the overlapping roles of hydrogen peroxide and nitric oxide in the acclimation of citrus plants to salinity. Plant J 60, 795-804.

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Zhang, M., Henquet, M., Chen, Z., Zhang, H., Zhang, Y., Ren, X., van der Krol, S., Gonneau, M., Bosch, D., and Gong, Z. (2009). LEW3, encoding a putative alpha-1,2-mannosyltransferase (ALG11) in N-linked glycoprotein, plays vital roles in cell-wall biosynthesis and the abiotic stress response in Arabidopsis thaliana. Plant J 60, 983-999.

 

2008

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Ainsworth, E.A., Beier, C., Calfapietra, C., Ceulemans, R., Durand-Tardif, M., Farquhar, G.D., Godbold, D.L., Hendrey, G.R., Hickler, T., Kaduk, J., Karnosky, D.F., Kimball, B.A., Korner, C., Koornneef, M., Lafarge, T., Leakey, A.D., Lewin, K.F., Long, S.P., Manderscheid, R., McNeil, D.L., Mies, T.A., Miglietta, F., Morgan, J.A., Nagy, J., Norby, R.J., Norton, R.M., Percy, K.E., Rogers, A., Soussana, J.F., Stitt, M., Weigel, H.J., and White, J.W.
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Alboresi, A., Caffarri, S., Nogue, F., Bassi, R., and Morosinotto, T. (2008). In silico and biochemical analysis of Physcomitrella patens photosynthetic antenna: identification of subunits which evolved upon land adaptation. PLoS ONE 3, e2033.

Angleles Nuñez, J.G., Kronenberger, J., Wuillème, S., Lepiniec, L., and Rochat, C. (2008). Study of AtSUS2 localization in seeds reveals a strong association with plastids. Plant Cell Physiol 49, 1621-1626.

Azimzadeh, J., Nacry, P., Christodoulidou, A., Drevensek, S., Camilleri, C., Amiour, N., Parcy, F., Pastuglia, M., and Bouchez, D. (2008). Arabidopsis TONNEAU1 proteins are essential for preprophase band formation and interact with centrin. Plant Cell 20, 2146-2159.

Bach, L., Michaelson, L.V., Haslam, R., Bellec, Y., Gissot, L., Marion, J., Da Costa, M., Boutin, J.P., Miquel, M., Tellier, F., Domergue, F., Markham, J.E., Beaudoin, F., Napier, J.A., and Faure, J.D. (2008). The very-long-chain hydroxy fatty acyl-CoA dehydratase PASTICCINO2 is essential and limiting for plant development. Proc Natl Acad Sci U S A 105, 14727-14731.

Barrero, J.M., Rodríguez, P.L., Quesada, V., Alabadí, D., Blázquez, M.A., Boutin, J.P., Marion-Poll, A., Ponce, M.R., and Micol, J.L. (2008). The ABA1 gene and carotenoid biosynthesis are required for late skotomorphogenic growth in Arabidopsis thaliana. Plant Cell Environ 31, 227-234.

Baud S, Dubreucq B, Miquel M, Rochat C, Lepiniec L
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Baud, S., and Lepiniec, L. (2008). Compared analysis of the regulatory systems controlling lipogenesis in hepatocytes of mice and in maturing oilseeds of Arabidopsis. C R Biol 331, 737-745.

Ben Amor, B., Wirth, S., Merchan, F., Laporte, P., d'Aubenton-Carafa, Y., Hirsch, J., Maizel, A., Mallory, A., Lucas, A., Deragon, J.M., Vaucheret, H., Thermes, C., and Crespi, M. (2008). Novel long non-protein coding RNAs involved in Arabidopsis differentiation and stress responses. Genome Res 19, 57-69.

Beopoulos, A., Mrozova, Z., Thevenieau, F., Le Dall, M.T., Hapala, I., Papanikolaou, S., Chardot, T., and Nicaud, J.M. (2008). Control of Lipid Accumulation in the Yeast Yarrowia lipolytica. Applied and Environmental Microbiology 74, 7779-7789.

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Bernard, S.M., Moller, A.L., Dionisio, G., Kichey, T., Jahn, T.P., Dubois, F., Baudo, M., Lopes, M.S., Terce-Laforgue, T., Foyer, C.H., Parry, M.A., Forde, B.G., Araus, J.L., Hirel, B., Schjoerring, J.K., and Habash, D.Z. (2008). Gene expression, cellular localisation and function of glutamine synthetase isozymes in wheat (Triticum aestivum L.). Plant Mol Biol 67, 89-105.

Berthome, R., Thomasset, M., Maene, M., Bourgeois, N., Froger, N., and Budar, F. (2008). pur4 mutations are lethal to the male, but not the female, gametophyte and affect sporophyte development in Arabidopsis. Plant Physiol 147, 650-660.

Blein, T., Pulido, A., Vialette-Guiraud, A., Nikovics, K., Morin, H., Hay, A., Johansen, I.E., Tsiantis, M., and Laufs, P. (2008). A conserved molecular framework for compound leaf development. Science 322, 1835-1839.

Boualem, A., Fergany, M., Fernandez, R., Troadec, C., Martin, A., Morin, H., Sari, M.A., Collin, F., Flowers, J.M., Pitrat, M., Purugganan, M.D., Dogimont, C., and Bendahmane, A. (2008). A conserved mutation in an ethylene biosynthesis enzyme leads to andromonoecy in melons. Science 321, 836-838.

Bouchabke, O., Chang, F., Simon, M., Voisin, R., Pelletier, G., and Durand-Tardif, M. (2008). Natural variation in Arabidopsis thaliana as a tool for highlighting differential drought responses. PLoS One 3, e1705.

Bouchabke-Coussa, O., Quashie, M.L., Seoane-Redondo, J., Fortabat, M.N., Gery, C., Yu, A., Linderme, D., Trouverie, J., Granier, F., Teoule, E., and Durand-Tardif, M. (2008). ESKIMO1 is a key gene involved in water economy as well as cold acclimation and salt tolerance. BMC Plant Biol 8, 125.

Boyer, F.D., Le Goff, X., and Hanna, I. (2008). Gold(I)-catalyzed cycloisomerization of 1,7-and 1,8-enynes: Application to the synthesis of a new allocolchicinoid. Journal of Organic Chemistry 73, 5163-5166.

Castaings, L., Camargo, A., Pocholle, D., Gaudon, V., Texier, Y., Boutet-Mercey, S., Taconnat, L., Renou, J.P., Daniel-Vedele, F., Fernandez, E., Meyer, C., and Krapp, A. (2008). The nodule inception-like protein 7 modulates nitrate sensing and metabolism in Arabidopsis. Plant J 57, 426-435.

Chavez Montes, R.A., Ranocha, P., Martinez, Y., Minic, Z., Jouanin, L., Marquis, M., Saulnier, L., Fulton, L.M., Cobbett, C.S., Bitton, F., Renou, J.P., Jauneau, A., and Goffner, D. (2008). Cell wall modifications in Arabidopsis plants with altered alpha-L-arabinofuranosidase activity. Plant Physiol 147, 63-77.

Chelysheva, L., Vezon, D., Belcram, K., Gendrot, G., and Grelon, M. (2008). The Arabidopsis BLAP75/Rmi1 homologue plays crucial roles in meiotic double-strand break repair. PLoS Genet 4, e1000309.

Coque, M., Martin, A., Veyrieras, J.B., Hirel, B., and Gallais, A. (2008). Genetic variation for N-remobilization and postsilking N-uptake in a set of maize recombinant inbred lines. 3. QTL detection and coincidences. Theor Appl Genet 117, 729-747.

De Muyt A, Mercier R, Mézard C, Grelon M
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Alpi A, Amrhein N, Bertl A, Blatt MR, Blumwald E, Cervone F, Dainty J, De Michelis MI, Epstein E, Galston AW, Goldsmith MH, Hawes C, Hell R, Hetherington A, Höfte H, Juergens G, Leaver CJ, Moroni A, Murphy A, Oparka K, Perata P, Quader H, Rausch T, Ritzenthaler C, Rivetta A, Robinson DG, Sanders D, Scheres B, Schumacher K, Sentenac H, Slayman CL, Soave C, Somerville C, Taiz L, Thiel G, Wagner R.
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2007) Plant neurobiology, no brain no gain. Trends in Plant Science, 12, 135-6. (PubMed)

Budar F, Berthomé R
(2007) Cytoplasmic male sterilities and mitochondrial gene mutations in plants In Plant mitochondria, Annual Plant Reviews (D. Logan Ed) Blackwell Publishing pp278-307.

Chiurugwi T, Pouteau S, Nicholls D, Tooke F, Ordidge M, Battey N
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Dadejová M, Lim YK, Soucková-Skalická K, Matyásek R, Grandbastien M-A, Leitch AR and Kovarík A (2007) Transcription activity of rRNA genes correlates with their tendency towards intergenomic homogenisation in Nicotiana allotetraploids. New Phytol 174, 658-668 (PubMed)

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Urbanowicz BR, Bennett AB, Del Campillo E, Catalá C, Hayashi T, Henrissat B, Höfte H, McQueen-Mason SJ, Patterson SE, Shoseyov O, Teeri TT, Rose JK. (2007) Structural Organization and a Standardized Nomenclature for Plant Endo-1,4-beta-Glucanases (Cellulases) of Glycosyl Hydrolase Family 9. Plant Physiol. 144,1693-6. (PubMed)

Zhang X, Germann S, Blus BJ, Khorasanizadeh S, Gaudin V, Jacobsen SE. (2007) The Arabidopsis LHP1 protein colocalizes with histone H3 Lys27 trimethylation. Nat Struct Mol Biol. 2007 Aug 5 (PubMed

Baud S, Mendoza MS, To A, Harscoët E, Lepiniec L, Dubreucq B. (2007a) WRINKLED1 specifies the regulatory action of LEAFY COTYLEDON2 towards fatty acid metabolism during seed maturation in Arabidopsis. Plant J. 50, 825-838. (PubMed)

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d'Andréa S, Canonge M, Beopoulos A, Jolivet P, Hartmann MA, Miquel M, Lepiniec L, Chardot T. (2007) At5g50600 encodes a member of the short-chain dehydrogenase reductase superfamily with 11beta- and 17beta-hydroxysteroid dehydrogenase activities associated with Arabidopsis thaliana seed oil bodies. Biochimie 89, 222-229. (PubMed)

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Macquet A, Ralet MC, Loudet O, Kronenberger J, Mouille G, Marion-Poll A, North HM (2007b) A naturally occurring mutation in an Arabidopsis accession affects a β-galactosidase that increases the hydrophilic potential of rhamnogalacturonan I in seed mucilage. Plant Cell 19, 3990-4006 (Pubmed)

Marinova K, Pourcel L, Weder B, Schwarz M, Barron D, Routaboul JM, Debeaujon I, Klein M. (2007) The Arabidopsis MATE transporter TT12 acts as a vacuolar flavonoid/H+ -antiporter active in proanthocyanidin-accumulating cells of the seed coat. Plant Cell. 19, 2023-2038 (PubMed)

North H, De Almeida A, Boutin JP, Frey A, To A, Botran L, Sotta B, Marion-Poll A (2007) The Arabidopsis ABA-deficient mutant aba4 demonstrates that the major route for stress-induced ABA accumulation is via neoxanthin isomers. Plant J 50, 810-824 (PubMed)

Pourcel L, Routaboul JM, Cheynier V, Lepiniec L, Debeaujon I. (2007) Flavonoid oxidation in plants: from biochemical properties to physiological functions. Trends Plant Sci. 12, 29-36 (PubMed)

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Chopin F, Wirth J, Dorbe M-F, Lejay L, Krapp A, Gojon A, Daniel-Vedele F (2007) The Arabidopsis nitrate transporter AtNRT2.1 is targeted to the root plasma membrane. Plant Physiology and Biochemistry 45, 630-635

Debouba M, Maaroufi-Dghimi H, Suzuki A, Ghorbel MH, Gouia H (2007) Changes in growth and activity of enzymes involved in nitrate reduction and ammonium assimilation in tomato seedlings in response to NaCl stress. Ann Bot (Lond) 99, 1143-1151

Deprost D, Yao L, Sormani R, Moreau M, Leterreux G, Nicolai M, Bedu M, Robaglia C, Meyer C (2007) The Arabidopsis TOR kinase links plant growth, yield, stress resistance and mRNA translation. EMBO Rep 8, 864-870

Gallais A, Coque M, Le Gouis J, Prioul JL, Hirel B, Quillere I (2007) Estimating the Proportion of Nitrogen Remobilization and of Postsilking Nitrogen Uptake Allocated to Maize Kernels by Nitrogen-15 Labeling. Crop Science 47, 685-691

Hirel B, Chardon F, Durand J (2007) The contribution of molecular physiology to the improvement of nitrogen use efficiency in crops. Journal of Crop Science and Biotechnology 10, 123-132

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Kichey T, Hirel B, Heumez E, Dubois F, Le Gouis J (2007) In winter wheat (Triticum aestivum L.), post-anthesis nitrogen uptake and remobilisation to the grain correlates with agronomic traits and nitrogen physiological markers. Field Crops Research 102, 22-32

Loudet O, Saliba-Colombani V, Camilleri C, Calenge F, Gaudon V, Koprivova A, North KA, Kopriva S, Daniel-Vedele F (2007) Natural variation for sulfate content in Arabidopsis thaliana is highly controlled by APR2. Nat Genet 39, 896-900

Martinelli T, Whittaker A, Bochicchio A, Vazzana C, Suzuki A, Masclaux-Daubresse C (2007) Amino acid pattern and glutamate metabolism during dehydration stress in the 'resurrection' plant Sporobolus stapfianus: a comparison between desiccation-sensitive and desiccation-tolerant leaves. J Exp Bot 58, 3037-3046

Martinelli T, Whittaker A, Masclaux-Daubresse C, Farrant JM, Brilli F, Loreto F, Vazzana C (2007) Evidence for the presence of photorespiration in desiccation-sensitive leaves of the C4 'resurrection' plant Sporobolus stapfianus during dehydration stress. J Exp Bot 58, 3929-3939

Masclaux-Daubresse C, Purdy S, Lemaitre T, Pourtau N, Taconnat L, Renou JP, Wingler A (2007) Genetic variation suggests interaction between cold acclimation and metabolic regulation of leaf senescence. Plant Physiol 143, 434-446

Mouille G, Ralet MC, Cavelier C, Eland C, Effroy D, Hematy K, McCartney L, Truong HN, Gaudon V, Thibault JF, Marchant A, Hofte H (2007) Homogalacturonan synthesis in Arabidopsis thaliana requires a Golgi-localized protein with a putative methyltransferase domain. Plant J 50, 605-614

Orsel M, Chopin F, Leleu O, Smith SJ, Krapp A, Daniel-Vedele F, Miller AJ (2007) Nitrate signalling and the two component high affinity uptake system in Arabidopsis. Plant Signalling and behaviour 2, 260-262

Sormani R, Yao L, Menand B, Ennar N, Lecampion C, Meyer C, Robaglia C (2007) Saccharomyces cerevisiae FKBP12 binds Arabidopsis thaliana TOR and its expression in plants leads to rapamycin susceptibility. BMC Plant Biol 7, 26

Tavernier V, Cadiou S, Pageau K, Lauge R, Reisdorf-Cren M, Langin T, Masclaux-Daubresse C (2007) The plant nitrogen mobilization promoted by Colletotrichum lindemuthianum in Phaseolus leaves depends on fungus pathogenicity. J Exp Bot 58, 3351-3360

Wirth J, Chopin F, Santoni V, Viennois G, Tillard P, Krapp A, Lejay L, Daniel-Vedele F, Gojon A (2007) Regulation of root nitrate uptake at the NRT2.1 protein level in Arabidopsis thaliana. J Biol Chem 282, 23541-23552

A. M. Chèvre, K. Adamczyk, F. Eber, V. Huteau, O. Coriton, J.C. Letanneur, C. Laredo, E. Jenczewski et H. Monod (2007) Modelling gene flow between oilseed rape and wild radish. I. Evolution of chromosome structure. Theoretical & Applied Genetics. 114, 209-22. (pdf)

Budar F, Berthomé R. (2007) Cytoplasmic male sterilities and mitochondrial gene mutations in land plants. Logan, D. C. Plant Mitochondria. Blackwell Publishing 31, 278-307.

Chelysheva L, Gendrot G, Vezon D, Doutriaux MP, Mercier R, Grelon M. (2007) Zip4/Spo22 is required for class I CO formation but not for synapsis completion in Arabidopsis thaliana.PLoS Genet 3(5), e83.

Délye, C. Menchari, Y. Guillemin, J.P. Matéjicek, A. Camilleri, C. Chauvel, B. (2007) Status of black grass (Alopecurus myosuroides) resistance to acetyl-coenzyme A carboxylase inhibitors in France. Weed Research 47, 95-105.

De Muyt A, Vezon D, Gendrot G, Gallois J.L, Stevens R, Grelon M. (2007) AtPRD1 is required for meiotic double strand break formation in Arabidopsis thaliana. Embo J 26(18) 41, 26-37.

Drouaud, J.Mercier, R.Chelysheva, L.Berard, A.Falque, M.Martin,O.Zanni,V.Brunel, D.Mezard,
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Falque, M., R. Mercier, C. Mezard, D. de Vienne and O. C. Martin (2007) Patterns of recombination and MLH1 foci density along mouse chromosomes: modeling effects of interference and obligate chiasma. Genetics.

Foo, E., S. E. Morris, K. Parmenter, N. Young, H. Wang, A. Jones, C. Rameau, C. G. Turnbull and C. A. Beveridge (2007) Feedback regulation of xylem cytokinin content is conserved in pea and Arabidopsis. Plant Physiol 143(3), 1418-28.

Giancola, S., Y. Rao, S. Chaillou, S. Hiard, A. Martin-Canadell, G. Pelletier and F. Budar (2007) Cytoplasmic suppression of Ogura cytoplasmic male sterility in European natural populations of Raphanus raphanistrum. Theor Appl Genet 114, 1333-1343.

Granier F, Bouchez D. (2007) Mutant Libraries: a High-throughput Arabidopsis Reverse Genetics System. Morot-Gaudry J.F, Lea P, Briat J.F. Title: Functional Plant Genomics. Science Publishers 143-164.

Johnson X, Bouchez D. (2007) The model species, Arabidopsis thaliana. Morot-Gaudry J.F, Lea P, Briat J.F. Functional Plant Genomics. Science Publishers 385-396.


Lahmy S, Guilleminot J, Schmit A.C, Pelletier G, Chaboute M.E, Devic M.
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Loudet O., Saliba-Colombani V., Camilleri C., Calenge F., Gaudon V., Koprivova A., North K.A., Kopriva S., Daniel-Vedele F. (2007) Natural variation for sulfate content in Arabidopsis is highly controlled by APR2 . Nature Genetics 39, 896-900. (pdf)

Mezard, C., J. Vignard, J. Drouaud and R. Mercier (2007) The road to crossovers: plants have their say. Trends Genet 23(2): 91-9.


Macquet A, Ralet M.C, Loudet O, Kronenberger J, Mouille G, Marion-Poll A, North H.M. (2007) A naturally occurring mutation in an Arabidopsis accession affects a beta-D-galactosidase that increases the hydrophilic potential of rhamnogalacturonan I in seed mucilage. Plant Cell 19(12), 3990-4006.

Mazier, M.Botton, E.Flamain, F.Bouchet, J. P.Courtial,B.Chupeau,M.C.Chupeau, Y.Maisonneuve, B.Lucas, H.(2007) Successful gene tagging in lettuce using the Tnt1 retrotransposon from tobacco. Plant Physiol 144, 18-31.

Nicaise, V., J. L. Gallois, F. Chafiai, L. M. Allen, V. Schurdi-Levraud, K. S. Browning, T. Candresse, C. Caranta, O. Le Gall and S. German-Retana (2007) Coordinated and selective recruitment of eIF4E and eIF4G factors for potyvirus infection in Arabidopsis thaliana. FEBS Lett 581(5), 1041-6.

Nicolas S, G. LeMignon, F. Eber, O. Coriton, H. Monod, V. Clouet, V. Huteau, A. Lostanlen, R. Delourme, B. Chalhoub, C. D. Ryder, A.-M. Chèvre et E. Jenczewski (2007) Homeologous recombination is responsible for most of the rearrangements that occur during meiosis of Brassica napus haploids. Genetics. 175, 487 503(StephGenetics2007. (pdf )

Pastuglia M, Bouchez D. (2007) Molecular encounters at microtubule ends in the plant cell cortex. Curr Opin Plant Biol 10(6), 557-63.

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Prioul-Gervais, S., G. Deniot, E. M. Receveur, A. Frankewitz, M. Fourmann, C. Rameau, M. L. Pilet-Nayel and A. Baranger (2007) Candidate genes for quantitative resistance to Mycosphaerella pinodes in pea (Pisum sativum L.). Theor Appl Genet 114(6), 971-84.

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2006

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Adenot X, Elmayan T, Lauressergues D, Boutet S, Bouché N, Gasciolli V, Vaucheret H
(2006) DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7. Curr Biol 16, 927-932 (PubMed)

Barrière Y, Denoue D, Briand M, Simon M, Jouanin L, Durand-Tardif M (2006) Genetic variations of cell wall digestibility related traits in floral stems of Arabidopsis thaliana accessions as a basis for the improvement of the feeding value in maize and forage plants. Theor Appl Genet 113, 163-175 (PubMed)

Belles-Boix E, Hamant O, Witiak S M, Morin H, Traas J, and Pautot V (2006) KNAT6: An Arabidopsis homeobox gene involved in meristem activity and organ separation. Plant Cell 18, 1900-1907 (PubMed)

Bouché N, Lauressergues D, Gasciolli V, Vaucheret H (2006) An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs. EMBO J 25, 3347-3356

Bouchez D, Bendahmane A, Lurin C, Sturbois B (2006). Nouvelles approches génétiques chez les plantes. Biofutur n°265 (avril 2006) 38-44

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Da Costa M, Bach L, Landrieu I, Bellec Y, Catrice O, Brown S, De Veylder L, Lippens G, Inze D, Faure J-D (2006) Arabidopsis PASTICCINO2 Is an Antiphosphatase Involved in Regulation of Cyclin-Dependent Kinase A. Plant Cell 18, 1426-1437.(PubMed)

Debeaujon I, Lepiniec L, Pourcel L, Routaboul JM
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Kopecny D, Tarkowski P, Majira A, Bouchez-Mahiout I, Nogué F, Lauriere M, Sandberg G, Laloue M, Houba-Hérin N (2006) Probing cytokinin homeostasis in Arabidopsis thaliana by constitutively overexpressing two forms of the maize cytokinin oxidase/dehydrogenase 1 gene. Plant Sci 171, 114-122

Lepiniec L, Debeaujon I, Routaboul JM, Baudry A, Pourcel L, Nesi N, Caboche M
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Mouille G, Witucka-Wall H, Bruyant, M-P, Loudet O, Pelletier S, Rihouey C, Lerouxel O, Lerouge P, Höfte H, Pauly M (2006) QTL analysis of primary cell wall composition in Arabidopsis thaliana. Plant Physiol 141, 1035-44 (PubMed)

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Mulligan EA, Ferry N, Jouanin L, Walters KFA, Port GR, Gatehouse AMR (2006) Comparing the impact of conventional pesticide and use of a transgenic pest-resistant crop on the beneficial carabid beetle Pterostichus melanarius. Pest Manag Sci 62, 999-1012.

Nikovics K, Blein T, Peaucelle A, Ishida T, Morin H, Aida M, Laufs P (2006) The balance between the MIR164A and CUC2 genes controls leaf margin serration in Arabidopsis. Plant Cell 18, 2929-2945 (PubMed)

Peaucelle A, Laufs P (2006) Des Casques Bleus chez les plantes : Un microARN, miR164, stabilise les frontières dans le méristème. Médecine et Sciences, 22, 796-798 (PubMed)

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Smyczynski C, Roudier F, Gissot L, Vaillant E, Grandjean O, Morin H, Masson T, Bellec Y, Geelen D, Faure JD (2006) The Arabidopsis immunophilin PASTICCINO1 targets a NAC–like transcription factor to the nucleus during the cell cycle. J Biol Chem 281, 25475–25484 (PubMed)

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Diaz C, Saliba-Colombani V, Loudet O, Belluomo P, Moreau L, Daniel-Vedele F, Morot-Gaudry JF, Masclaux-Daubresse C (2006) Leaf yellowing and anthocyanin accumulation are two genetically independent strategies in response to nitrogen limitation in Arabidopsis thaliana. Plant Cell Physiol 47: 74-83

Fei H, Chaillou S, Hirel B, Polowick P, Mahon JD, Vessey JK (2006) Effects of the overexpression of a soybean cytosolic glutamine synthetase gene (GS15) linked to organ-specific promoters on growth and nitrogen accumulation of pea plants supplied with ammonium. Plant Physiol Biochem 44: 543-550

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Fontaine JX, Saladino F, Agrimonti C, Bedu M, Terce-Laforgue T, Tetu T, Hirel B, Restivo FM, Dubois F (2006) Control of the synthesis and subcellular targeting of the two GDH genes products in leaves and stems of Nicotiana plumbaginifolia and Arabidopsis thaliana. Plant Cell Physiol 47: 410-418

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Kichey T, Heumez E, Pocholle D, Pageau K, Vanacker H, Dubois F, Le Gouis J, Hirel B (2006) Combined agronomic and physiological aspects of nitrogen management in wheat highlight a central role for glutamine synthetase. New Phytol 169: 265-278

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Martin A, Lee J, Kichey T, Gerentes D, Zivy M, Tatout C, Dubois F, Balliau T, Valot B, Davanture M, Terce-Laforgue T, Quillere I, Coque M, Gallais A, Gonzalez-Moro MB, Bethencourt L, Habash DZ, Lea PJ, Charcosset A, Perez P, Murigneux A, Sakakibara H, Edwards KJ, Hirel B (2006) Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production. Plant Cell 18: 3252-3274

Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A (2006) Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco. Plant Physiol 140: 444-456

Orsel M, Chopin F, Leleu O, Smith SJ, Krapp A, Daniel-Vedele F, Miller AJ (2006) Characterization of a two-component high-affinity nitrate uptake system in Arabidopsis. Physiology and protein-protein interaction. Plant Physiol 142: 1304-1317

Pageau K, Reisdorf-Cren M, Morot-Gaudry JF, Masclaux-Daubresse C (2006) The two senescence-related markers, GS1 (cytosolic glutamine synthetase) and GDH (glutamate dehydrogenase), involved in nitrogen mobilization, are differentially regulated during pathogen attack and by stress hormones and reactive oxygen species in Nicotiana tabacum L. leaves. J Exp Bot 57: 547-557

Pommel B, Gallais A, Coque M, Quillere I, Hirel B, Prioul JL, Andrieu B, Floriot M (2006) Carbon and nitrogen allocation and grain filling in three maize hybrids differing in leaf senescence. European Journal of Agronomy 24: 203-211

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Adenot X, Elmayan T, Lauressergues D, Boutet S, Bouché N, Gasciolli V et Vaucheret H.(2006) Uncoupled production of ta-siRNAs in hypomorphic rdr6 and sgs3 mutants uncovers a role for TAS3 in AGO7- DCL4-DRB4-mediated control of leaf morphology, Current
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Drouaud J, Camilleri C, Bourguignon PY, Canaguier A, Berard A, Vezon D, Giancola S, Brunel D, Colot V, Prum B, Quesneville H ,Mezard C.(2006) Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination "hot spots". Genome Res 16:106-114.

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Trouiller B, Schaefer DG, Charlot F ,Nogue F.(2006) MSH2 is essential for the preservation of genome integrity and prevents homeologous recombination in the moss Physcomitrella patens. Nucleic Acids Res 34:232-242.

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Z. Liu, K. Adamczyk, M. Manzanares-Dauleux, F. Eber, M.-O. Lucas, R. Delourme, A.-M. Chèvre et E. Jenczewski (2006) Mapping PrBn and Other Quantitative Trait Loci Responsible for the Control of Homoeologous Chromosome Pairing in Oilseed Rape (Brassica napus L.) Haploids. Genetics. 174(3):1583-96 (LiuGenetics2006. (pdf)

 


 







 

 


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